Polypterus senegalus (gray bichir): 120519151
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Entry
120519151 CDS
T08668
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120519151
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120519151
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
hEGF
EGF_3
EGF_TEN
EGF_2
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
120519151
NCBI-ProteinID:
XP_039598233
LinkDB
All DBs
Position
18:39726271..40115720
Genome browser
AA seq
1875 aa
AA seq
DB search
MWRLGTFVIAVLAGVALSPTVDSQGTRAGVDKARARSWLQDSRVAARELGARNSGSLNVT
GRNAQEPAKTHGRDAVGQGTPAYNRQGGVTPRSDSESRQRSASTRRLAGPNVCGGHCCSG
WAVAPGSNRCIKPDCNPPCQNRGSCSRPQTCVCRSGFQGSRCEEKAPEQVYIPSGTSRVL
QPVRAASAHLDRRKLEASVRGNLTRNRSESIPNSRNKPASTSQVPSTSQSKRVQPNSSPQ
LTGTSRTVKRFPSGQITSNALPNGQTYNSLNHVAIKQEEEKVSNAVAPKGSNLTAGIDRI
KIVFTPMICKQVCNNGHCYNNCEKGDTTTVYSENSQSQNQDSKSGFRLYFCQIPCMNGGR
CIGRDHCWCPSNSTGKFCHLPALRPDKQLALRKESNRPTQNTSFAHSMFTLPLSNQLASV
HPSLVNVHIHHPPETKVQIHQVARVKPEPPKTDQNSLDGVQLIHSVQQRTQLSKGAQQGT
ENNSINGNSIIGNGSGSSRQQNRLNSYVGRCFQETVDGQCGKPLPGLTKQDDCCGSIGKS
WGLNKCTECPPKPANAVIENGHVKCPKGYKRMNSTHCQDINECLMPGICKNSECLNTRGS
YRCTCKPGFMMDISRSHCVSEKAISLVQDRCYRSVSGGTCSLPLTQSLTMQICCCSRVGK
GWGKSCERCPLPDTDTFKEICPAGHGYTYSRSEIQLLMRQVEEEELEKSSVHQGNTDESS
RRVEKEHEGSTSVKKTTTATETLSKHSVGVIEKATPQSPVQLYPDSSVVDKASINVATQI
TEIDRCSAHPHICGPGTCVTVQNGYTCYCHNGYQMNTLQTHCVDINECEKSPCEGKGKCV
NTAGSYTCYCHSGYIQVITQKRRSCQDVNECEQPNICPGHHCINTPGSYSCECAQGYLKS
RRGHCEDVDECQNPTTCPTGRCINTLGSFHCVSCGVGYRATNNGCIDEDECLIDKICENG
TCVNLEGSYFCSCNLGYVAAQDDKSCHDQDECLTAGICINGQCINVDGSYRCRCDQGFME
TADAKNCIDINECLKSETCLNGMCTNMEGSYMCSDCKPGYKISEDHLKCEDINECTLPDI
CAGGVCTNSEGSFSCFKCRKGFRLSEDKQRCEDINECASHNICPRGLCANIVGSYTCMAC
PHGHRLSADRQQCVDINECLLSDVCPGGACVNTDGSYSCVSCDAGYRLSADSKSCEDVNE
CEDGNTCSGGECTNSPGSYSCSCTQGYELIGGIMCIDVNECLTLDICGPTGECMNSQGSY
FCLCVAGYATSTDGISCQDVNECEEPTTCSRGRCLNIGGSYQCICDAGFQFSEETKDCED
KDECMEYGINVCGTWRCENTIGSYRCFMGCQNRETTGDCDIDECVNKTICGSHGFCENTD
GSYHCVCDQGFQNSPGTSACVDINECESFTAVCGSAFCENVEGTFLCLCPSDNEEFDPQT
NQCRNRIMTEEPKIPKIPGAHPAGEEERKECYYNLNDPGFCDSVLSGNTTKQECCCTVGE
GWGDNCETHPCPIVGSAEYSELCPKGNGFLAVDGSAFGLTHPLYSDADECFLFGSEICKN
GVCINTVPRYRCICRDGFYYDTVHLECVDNNECEHEDVCEDGECVNTPGSYNCFCSPPLI
LDVTRRRCVNSSFTTDLEGTIHLDICWKELIDGYVCSAPQLQRQTTFTECCCMYGVAWSN
NCALCPTPTSEEYAMVCNRAVDGLRERPGYEYGPDIPFYSYNVNEPAYGPPELHTGPFYP
ARHPDREYSSPRVPSGHPRQYNPPLINAFPDRYDGFEGLQAEECGILNGCENGRCVRVRE
GYTCDCFDGYELDLTKMACLDINECKDISDRIPLCKNGKCENTEGSYRCECLPGFVASAH
PDQCIHSPPKPGAEQ
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgacttggaacctttgtcatcgctgttctggccggcgttgcgctttcgccgaca
gtcgattctcagggcacacgcgccggcgtggacaaggcgcgagcgcgatcctggctgcaa
gacagccgagtagcggctcgcgagttgggcgcacgtaacagcggcagccttaatgtcacc
ggacggaacgctcaggagccggcaaagacacacggcagggatgccgtggggcaggggacc
ccggcgtacaaccggcaaggaggagtgactccccggagtgattcggagagcagacagagg
agcgcgtctactagacgcctcgcagggcctaatgtctgtggaggacattgctgttcagga
tgggctgtagctcctggttcaaacagatgtataaagcctgactgcaaccctccgtgccaa
aatcgtggctcatgcagtcgtccacagacatgtgtttgtcgctctggctttcaaggttct
agatgcgaggaaaaggcccccgaacaggtatatatcccctcaggcacctcacgagtgctc
cagccagtccgggcagcttcagcccatcttgacagaagaaaactggaagccagcgtacga
ggaaatttgactagaaacagaagtgaaagcatcccaaattccagaaataaacctgcatcc
acaagccaagttccttccacgagtcagagcaaaagagtccaacccaattcttcacctcaa
ctaacaggaacttcccgtactgtcaaaagattcccatctggacaaatcacttcaaatgcc
ttacccaatggccagacatacaacagtctaaatcatgttgccatcaaacaagaagaggaa
aaagttagcaatgctgtggcaccgaaagggtccaacctgacagctggcattgaccgaata
aagattgttttcacccccatgatctgcaagcaagtctgcaataatggacattgctacaac
aactgtgaaaagggcgataccacaactgtttacagtgaaaatagccaaagtcaaaatcaa
gactccaaatcaggctttcgcctatacttctgccagattccttgcatgaatggtggacgc
tgtattggaagagaccactgctggtgtccatctaactccacagggaagttctgtcacctt
ccagctcttcgtcctgacaaacaactagcactaaggaaggaaagcaaccggcctactcag
aatacatcctttgctcactccatgttcacattgccactttcaaatcaactagcttctgtg
catccatccttggtaaatgtacacatacaccacccaccggaaactaaagtgcagatccac
caagtagccagggtaaaaccagaacctccaaagacagaccaaaatagccttgatggagtg
cagttgattcattctgtgcagcagaggactcagttatccaaaggagcacaacaaggaaca
gaaaacaactccattaatggcaacagcatcattggaaatggaagtggttcttcgaggcag
cagaacaggctcaatagctatgttgggagatgttttcaagaaactgttgatggccagtgt
ggtaaacctcttcctggtctgactaagcaggatgattgctgtggcagtattggaaaatcc
tggggattgaacaagtgtacggaatgtcctcccaaaccagcaaatgcagtgattgaaaat
ggtcatgtgaagtgtccaaaaggttacaagcggatgaacagcacccactgtcaagacatt
aatgaatgcctgatgcctggaatctgtaaaaactctgagtgtttgaatactcgaggtagc
tacagatgtacctgcaaacctggctttatgatggacatttcaagaagccactgtgtctcg
gaaaaagcaatatctctagtacaagacaggtgctaccgctcagtatctgggggcacctgt
tccctaccattgactcaatcccttacgatgcagatctgttgctgtagccgagttggcaaa
ggatggggcaagagttgtgaacgatgtccgctgcccgatacagatacttttaaagagatc
tgcccagctggccatggctacacatactctcggtcagaaattcagcttttaatgaggcag
gtagaagaagaagagctagaaaagagttctgttcaccaaggcaatactgatgagtcatct
cggagggtggaaaaagagcatgaaggttctacatcagttaaaaagaccacgactgctacg
gaaaccttgtccaagcattcagtaggtgtcatagagaaggctactccccagtcacctgtt
caactgtacccagattcctcagtagtggacaaagcttcaattaatgtagcgacccagatt
acagagattgaccgatgttctgcacatcctcacatttgtggtcctggtacttgtgtcacc
gtgcaaaatggatacacatgttactgtcataatggatatcagatgaacacactgcagact
cattgtgttgatatcaatgaatgtgagaaaagcccttgtgaaggaaaaggaaaatgtgtg
aacacagcaggctcttacacctgctactgccactctggatacatacaggtcatcacacaa
aaacggaggtcttgtcaagatgtcaatgagtgtgagcagcctaatatttgccctggacat
cattgcataaacactccaggctcctatagttgtgagtgtgcacagggatatttgaagtca
aggagaggacactgtgaggacgttgatgaatgccaaaaccctaccacctgtcccactgga
agatgtattaacacactgggctcattccactgtgtaagctgtggagtgggatacagagcg
acgaacaatggatgtatagatgaagatgaatgtcttattgacaaaatttgtgaaaatgga
acctgtgtcaacctggaagggtcttatttctgcagctgcaaccttggatatgtagcagct
caggatgacaagagttgtcatgatcaagatgagtgcctaactgcaggaatctgcatcaac
ggacagtgtatcaatgtggatggctcttacagatgtagatgtgaccagggattcatggag
actgcagatgccaaaaactgcatagacatcaatgagtgcttgaaaagtgaaacctgcctt
aatggcatgtgcaccaatatggaaggatcctatatgtgttcagactgtaaaccagggtac
aagatttcagaagatcatctaaaatgtgaagatatcaatgaatgcacgcttccagacatc
tgtgcaggtggagtctgcaccaattcggagggctctttctcttgcttcaaatgtagaaaa
gggttccgtctttctgaagataaacaacgctgtgaagatattaacgaatgtgcatcccac
aatatttgtcccagaggtctgtgtgctaatattgtgggttcctacacttgtatggcttgt
cctcatgggcacagattatctgcagatagacagcaatgtgtagatattaatgaatgcctc
ttgtcagatgtatgtcctggtggagcttgtgtgaatactgatggctcatactcatgcgtc
agttgcgatgctggttatagactttctgctgacagcaagagctgtgaagatgtaaatgaa
tgtgaagatggcaatacttgttcagggggagagtgcactaactccccagggtcttacagc
tgttcgtgtactcaaggatatgaactcattggtggcattatgtgcatagatgtgaatgag
tgcttgacactggatatctgtggacctactggagaatgcatgaacagccaaggttcctac
ttctgcctctgtgttgctggctatgccacaagcactgatgggatcagttgtcaagatgtt
aatgagtgtgaggagcctactacatgctccaggggtcggtgtctgaacattggcgggtca
taccagtgcatctgtgatgcaggatttcagttttcagaggagactaaagattgtgaagat
aaggacgaatgtatggagtatggcattaacgtctgtggcacgtggcgctgcgagaatacc
atcggctcgtacaggtgctttatgggttgtcagaatagagaaacaactggagattgtgac
attgatgagtgtgttaataagaccatctgtggcagccatggcttctgcgaaaacactgat
ggctcctaccactgtgtgtgtgatcaaggctttcagaactctccagggacctcagcatgt
gtcgatatcaacgaatgtgagagtttcactgcagtgtgtggctcagctttttgcgagaat
gtagaggggaccttcttgtgcctctgtccctctgacaatgaagagtttgatccccagacc
aaccagtgtcgcaacaggatcatgacagaagagcccaaaattcccaaaatacctggtgca
cacccagcaggagaagaagagagaaaggagtgctactacaatctgaacgaccccggcttt
tgtgacagcgtcctgtcaggaaacaccaccaagcaagaatgctgctgcactgtgggtgaa
ggctggggagacaactgtgagacacacccgtgccccattgtgggaagtgctgaatacagc
gaactttgtccaaaagggaatggtttccttgctgtggatggcagtgcctttggcttaaca
catccactatacagcgatgctgatgaatgcttcctttttggatctgaaatttgtaaaaat
ggagtgtgcataaacacagtcccaagatacaggtgtatctgtcgtgatggattttactat
gatacagttcatttggagtgtgtggacaataatgagtgcgagcatgaagacgtctgtgag
gatggggagtgtgtcaatacacccggttcatataactgcttctgcagtcctccgcttatt
ctggatgtaactaggagacgatgtgtcaactccagctttaccacagacttggaaggaacc
atacatctggacatctgctggaaggagctgattgatggatatgtgtgctcggccccccaa
ctgcaaaggcagaccacgtttacagaatgctgctgcatgtatggtgtggcctggagtaat
aactgtgccctctgtcccacaccgacctcagaggaatatgcaatggtgtgtaatcgagca
gtggatggcctaagagagcggcccggctatgaatacggaccagatatccctttttatagc
tacaatgtaaatgaaccagcatacggaccacctgaactgcatactggacctttctatcct
gccagacaccctgaccgtgaatattcttcccctagagtgcccagcggtcaccccagacaa
tacaatcctccactgataaacgcctttcctgatcgatatgatggatttgaaggattgcag
gcagaagaatgtgggattttaaatggctgtgaaaatggccgctgcgtcagagtgcgtgag
gggtacacttgtgactgctttgatggatatgaacttgacttgactaaaatggcttgtctt
gacataaatgaatgtaaagacatcagcgaccgcattcctctgtgcaagaatggcaagtgc
gagaacacagagggctcctaccgatgtgagtgtctgccaggattcgtcgcctctgctcat
ccggatcagtgcattcacagcccaccaaagccgggagcagagcagtga
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