Polypterus senegalus (gray bichir): 120519709
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Entry
120519709 CDS
T08668
Name
(RefSeq) zinc finger homeobox protein 4-like
KO
K09380
zinc finger homeobox protein 4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120519709
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120519709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
zf-C2H2_4
zf-C2H2
Homeobox_KN
zf-C2H2_jaz
zf-Di19
Zn_SUZ12
zf-C2H2_16
zf-C2H2_11
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
120519709
NCBI-ProteinID:
XP_039598510
LinkDB
All DBs
Position
Unknown
AA seq
2412 aa
AA seq
DB search
IRPVSRDSPGSAPAGKRTIVQEKDKENDTASKRPKSVEDNKLVNDQTYQCPYCNYSSKDA
NRIQVHVMSQHSMQPVISCPLCQDVLSNKIHLQLHLTHLHSVSPDCVEKLLMTVSLPDVM
VPNNMLLPANTQDKLHLLPETTSAVTPEVTGKSSGENFLEEKPNIAQTNSKVELDLKNED
VKPPKEASEAPDWKKGSSEDLKSTESLHEQLTELQKRQQLSVSDRHVYKYRCNHCSLAFK
TMQKLQIHSQYHAIRAATMCSLCQRSFRTFLALKKHLENGHPELTESEVQQLCGSLPLNG
DLCTESEYRALEEAQAMEQELEKEDDLDQEGKASPAGSDSSSLPDELGSEPKRTLPFRKG
PNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNN
SIDNKPYKCNICNVAYSQSSTLEIHMRSVLHQTKARTAKLENSSSSSVTSGNSVVAPANS
PVSANQGTVESASLPSISSSKDNNVDAKEVTKKQTSDLLSAQTSHQPPQSPAQLSMQLQH
ELQHQAAFFQPQFLNPAFLPHFPMTPEALLQFQQPQFLFPFYIPGTEFSLNPELALHSAT
FGMPGMTGSLLEDLKQQMQQQHQVGQQQLQLLQQQPSQPQIQQPLQKPPSQANKLAKVDQ
INVVTSEIYSSKDNEDSLEKVDSRMKPDFQNESETAKENKDPKRQKNLEPLLPPPRIVSG
ARGNAAKALLENFGFELVIQYNENRQKGQKKGKSVDEEISDKLECGTCGKLFSNMLILKS
HQEHVHGQFFPYGELEKFARQYRDAYDRLYPITPSSPETPPPPPPPPASSQPSSAGAGKV
QTPASTPVPLQAPPPPPPPPPPPPPPPPPATPAQVQLPVSLDLPLFPPLMMQSVQHPGLP
PQLALQLPTMDSLSADLTQLCQQQLALDPNFLRHSQFKRPRTRITDDQLKILRAYFDINN
SPNEEQIQEMSEKSGLPQKVIKHWFRNTLFKERQRSKDSPYNFSIPPVTTLEDVRIDSQL
SSLEYYRTDATMNKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVV
WFQNARQKARKSYENQADAKDNEKKELTNERYIRTTNMQYQCKKCNVVFPRIFDLITHQK
KLCYKDEDDDGQDDSQSEDNVDISEHMLSKHPHFSGQPDSSKAIIGTTSSGSGSSTPLMP
SPKPEIGKTSPKPDFPIDKPKQAESVPNSQGVKYINSSESQPPQPTTPQPQQPKQPLQQI
ARPHSQPLSAAVPSSPLPIAIASLQNSLPPQMLQYQCDQCKIAFPTVELWQEHQHMHFLA
AQNQFLHSQFLERPIDMPYMIFDPNNPLMTGQLLTGALSQMSSQTSASLSTPTGPGSGSM
KRKLDDKEDGSSNEKDGGNSGEDQHRDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHI
AREVGLKKRVVQVWFQNTRARERKGQFRAMGPAQSHKKCPFCRALFKAKSALESHIRSRH
WHEAKQAGYSLPPSPLITADDGGESPQKYSFFEYPILPITKMESNDCELPAATSTPSKPS
ELSMKNFQNLSSIKAENSDDIEGLNMNSADMSYDQNKMDFDETSSINTAISDATTVDEGN
NEVESITGSTSEVKAMYSPTDPKTPISVDTKTNPTPTSETCDERFPFSLVSPSLSFSGRD
SDQYYSLKDDDLDDNDQSETSSLADPSSPSPFASNNPFKSSKYSGDRPGHKRFRTQMSNL
QLKVLKACFNDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKMNIGKPFVISQ
GGPDGSRPECSLCGVKYTARLSIRDHIFSKQHIAKVQETVGNQLDREKDYLAPTTVRQLM
AQQELDRLKKATDVLGLTAQQQTVIDSNALHGLSLPTAYPGLSGLPPVLLPGVNGPSSLP
GFPPNTPALASPGAGMLGFPTPATPSPAMSLSNAPSKNFLQTPASHTPLTSQQTEQQQNK
DLENDKKLEKVKNVRDREVENTTPSTPSHKKREKVTPGLPSMGKIGSESSMDQTKMQVLQ
NAIAGDASSFLGGQFLPYFIPGFASCFTPQLPGGVQGGYFPPLCGMENLFPYSPAVPQAI
AGLSPTALLQQYQQYQQSLQDSLQKQQQQQKQVEQQQQKAASAKSLNAQSDVLKTKEVPE
PKEDKGSLNESTKEETQPDTKSTDFLDAYIVPSIKHEFICRKCQMMFADEDSAVGHQKSF
CYFGQPFIDPQETVLRNPVNKYNCLACDLAINGNEALGQHLQSSLHKEKTIKQAMRNAKE
HARLLPHSVCSPNPNTTSTSQSAASSNNTYPHLSRLSMKSWPNILFQASARKAASSPSSP
PSSLSLPSTVTSTSCSTSGVQTSLPTESCSDESDSELSQKLDDLDNSLEVKAKPASGLDG
NFNSIRMDMFSV
NT seq
7241 nt
NT seq
+upstream
nt +downstream
nt
gcatacgtccagtaagccgagattccccaggaagtgcaccagctgggaagcggacaatag
tgcaggagaaagacaaagaaaatgatactgcatccaagagaccgaaatccgtggaggaca
acaaacttgtcaatgaccagacctaccagtgtccatactgtaactacagcagtaaagacg
ccaatcggatccaggtgcacgtcatgtcccagcactctatgcagcctgtcatcagctgcc
ctctctgccaagatgtcctcagcaacaagatccatctccagcttcacctgacccacttgc
acagcgtgtctcctgactgcgttgagaagttactcatgacggtttctctacctgatgtta
tggtgccgaataacatgctgctgccagcaaatactcaagataaactccatctactgcccg
aaaccacttcagcagttaccccggaggtgactgggaagtcatcaggtgaaaatttcctag
aggagaagccaaacatagcacaaaccaactcaaaggttgagctggaccttaagaatgagg
acgtcaagccaccaaaggaagcttcagaagcaccagactggaagaagggtagcagcgagg
acttgaaaagcactgaatccttgcacgagcagttgactgaactgcagaaacggcagcaac
tctcggtctctgacaggcatgtctataaataccgctgcaaccactgtagtctggctttca
agactatgcagaagcttcagatacattcccagtaccacgctatccgggctgcaacaatgt
gcagcctctgccagcgcagcttccgtacattccttgctcttaagaagcacttggaaaatg
gccatcccgagcttacagagtccgaagtgcagcagctgtgtggaagcctgcctcttaatg
gagatctctgcacagaaagcgagtacagagctctggaagaagcacaggctatggagcagg
aacttgaaaaagaggatgatttggaccaggaaggaaaagcaagccctgcaggcagcgaca
gtagttcattaccggacgagctgggctctgagccaaagcggactttgccttttaggaagg
gcccaaatttcaccatggaaaagttcctggatccttcgcgtccatacaaatgcaccgtgt
gtaaggagtcgtttactcaaaagaacattctcttggttcactataattctgtttctcatt
tacacaagttgaagaaggttcttcaggaggcctccagccctgttccacaggagaccaaca
acagcatagataacaaaccctacaaatgcaatatttgcaatgttgcttacagccaaagct
caacattggaaattcacatgaggtctgtgctgcaccagaccaaagccagaactgctaaat
tagaaaacagcagcagcagcagcgtcacaagtggaaacagtgtagtggcaccagccaaca
gcccagtttctgccaaccaaggaactgtggaatctgcatctttaccatcaatcagcagca
gcaaagataacaatgtagatgccaaagaagtcactaaaaagcaaacttctgatctacttt
cggctcaaacatcacatcagcctcctcagtcaccagcacaactttcaatgcaattgcagc
acgagctacagcaccaggcagctttctttcagccccagtttcttaacccagcttttttac
ctcatttcccaatgaccccagaggctttgttgcagttccaacaacctcaattccttttcc
cattctacattcccggaacagagtttagcctcaatcccgagttagctttgcactcggcca
ctttcgggatgcctggaatgaccggatcactactggaagacttgaagcagcagatgcaac
agcagcaccaggtgggtcagcaacagctgcagctcctacaacagcagccttctcagcctc
aaatccaacaaccgcttcagaaaccgccatctcaggctaacaagctggcaaaagtcgatc
agataaatgtggtgacatctgaaatttacagctccaaagacaatgaagattcactggaga
aagtagacagcagaatgaagccagactttcaaaatgagagtgaaactgcaaaagaaaaca
aagaccccaaaaggcagaaaaatcttgaaccactcttacctcctcctcggattgtttctg
gagcaagggggaatgccgctaaagccttactagaaaactttggctttgagttggtcatcc
agtataacgagaatcgtcagaaaggtcagaaaaaaggaaaaagtgttgacgaagaaatca
gtgacaaattagaatgtgggacgtgcggaaaactgttttctaatatgctcatcttgaaaa
gccatcaagagcacgtccatggtcagtttttcccatatggtgagttggaaaagtttgcca
ggcagtacagagatgcttacgatagactgtatcccattacaccatcgtctccagaaactc
ctcctcctccaccacctcctcctgcatcctcacagccgtcatctgccggagctggaaagg
tccagacaccagcatctacgccggttccattgcaggcaccgcctcccccacctccacctc
ctccacctccgcctccaccaccacctccagctaccccagcccaggtccagctgcctgttt
cattagaccttcctctttttcctcctctgatgatgcagtcagtacagcatccaggtttgc
ctcctcagcttgcccttcagcttcccacaatggactccttgtctgcagaccttacacagc
tttgtcagcagcagctggccttagatccaaacttcctaagacattctcagttcaaaagac
cacgcaccagaattacagatgaccagctgaaaattctacgagcctactttgacattaata
attctcccaatgaagaacagatacaggaaatgtctgaaaaatctggtctcccacaaaaag
ttatcaagcattggtttcgcaacactctttttaaggagaggcaacgaagcaaagactctc
catataacttcagcattccacccgtcacaactttggaagatgttaggattgattctcagc
tgagtagcctggagtactacagaacagatgcaaccatgaataagaggtcatcaagaacaa
gatttacagattaccagcttcgggtccttcaagattttttcgatacaaatgcttacccaa
aagatgatgaaatcgagcagctgtccacagttctaaatcttcccacacgggtgatagttg
tctggttccagaatgctcgacagaaggcacgcaagagttatgagaaccaggcggatgcca
aggacaatgagaaaaaagagctaacaaatgagaggtacattcgaaccactaacatgcagt
accagtgtaaaaaatgtaatgtggtgtttccccgcatttttgacttgatcactcatcaga
aaaaactgtgctacaaagatgaagatgatgatggacaagacgacagtcaatcggaggata
atgttgatatcagtgagcatatgctttccaagcatccacacttttcaggacagccagatt
catccaaggctatcattggaaccaccagctccggttctggctccagtactcctctgatgc
cttctccaaagcctgaaattgggaaaacgtcaccaaaacctgattttccaatagacaaac
caaagcaagcggagagcgttccaaactcccaaggggttaaatatataaactcctctgaat
ctcagccaccccaaccaacaacacctcaacctcagcaaccaaaacaacccctgcagcaaa
ttgctagacctcattctcagccactgagtgcggccgtcccctccagcccactgcccattg
ccatcgcctctttacagaatagtctacctcctcagatgttacagtaccaatgtgaccaat
gtaaaattgcctttccaacggtagaactgtggcaggagcaccagcacatgcatttcttag
cagctcaaaatcagtttcttcactcacagtttttagagagaccaattgatatgccgtaca
tgatctttgaccccaacaaccccctaatgactgggcaactcctaactggcgctctttcac
aaatgtcatctcagaccagtgcatccctgtccacacccactggtccaggttcaggttcaa
tgaaacgaaaattggatgataaagaggatggcagttctaacgaaaaagatggcggaaaca
gcggtgaagatcagcaccgtgataaacggttgcgaaccaccattacgccagaacagcttg
agattctgtacgagaagtacttgctggattctaatccaacaaggaaaatgctggatcata
tcgctcgagaggttggcttgaagaagagagtggtgcaagtgtggtttcagaatactagag
ctcgagagagaaaagggcagtttcgggcaatgggtccagcccagtctcacaaaaagtgtc
cattctgccgtgctctcttcaaagccaagtctgcccttgaaagtcacatccgttcacggc
attggcatgaggcaaagcaagcgggatacagcttacccccaagccccttaataacagcag
atgatggaggtgaaagcccccaaaagtatagcttctttgaatatccgattctgccgatta
caaaaatggagtccaatgactgtgaactgccagctgcaacttcaacaccaagtaagcctt
ccgaattgagcatgaaaaactttcaaaacctttcctccattaaggcagagaacagtgacg
atattgaaggcctaaacatgaattccgcagatatgtcctatgaccagaacaaaatggatt
ttgatgaaacgtcatccattaacacagcgatcagtgatgcaacaacagtggacgagggaa
ataatgaggttgaaagtataactggcagtacaagtgaagtgaaagccatgtattctccaa
cagatcccaaaacaccaatatctgtcgacacaaaaaccaacccaacaccaacctctgaga
cgtgtgatgaacgttttcccttctctctagttagtccatctttgagtttctctgggagag
acagtgaccagtattatagcctgaaagatgatgatctagatgataatgatcaaagtgaaa
cgtccagtttagcagacccaagctcgccaagcccctttgcatctaataatcccttcaagt
catcaaagtacagtggagaccggcctggacataagcgatttagaactcaaatgagtaacc
tgcagctgaaagtccttaaggcatgtttcaatgactaccggactccaacaatgcaagagt
gtgaaatgcttggtaatgaaatagggttgccaaaaagagttgtccaggtctggtttcaga
atgcacgggcaaaagaaaagaaattcaaaatgaacattggaaagccatttgtgattagtc
aaggaggcccggatggttcaaggccagaatgtagtttgtgtggtgtgaaatatactgctc
gtctttctattcgtgaccacatcttctcaaaacagcacattgcaaaggtgcaagaaactg
taggaaaccagttggacagagaaaaagattatcttgctcccacgactgtccgccagctga
tggctcaacaggagctggatcgcctaaagaaggcaaccgatgttctaggcttgacagctc
agcagcaaacagtgattgacagcaatgcactacacggtcttagtctgccaactgcatatc
cagggctttcgggtcttccacccgttctccttcccggagtaaatggcccttcatctcttc
ctggttttccaccgaatacaccagctttagcatcccccggtgctggcatgcttgggtttc
cgactccagccaccccttctcctgctatgtctctcagcaatgctccctccaagaatttcc
tgcagactcctgcttcccacacacctctgacaagccagcagactgaacagcagcagaaca
aagacttggagaatgacaagaagctcgaaaaggtgaagaatgttcgtgaccgagaagttg
agaacaccacgcccagtacacccagtcacaaaaaaagggaaaaggtaacgccagggcttc
ccagcatgggcaaaataggaagtgagtcgagcatggatcaaacaaagatgcaggtgctcc
agaacgccatcgcgggagatgccagttcttttctcggaggccagttcctaccttatttca
tcccagggtttgcgtcctgcttcacgccacagcttcctggtggagttcaggggggttatt
ttccaccactttgtggaatggagaacctctttccgtacagcccggctgtgccacaagcaa
ttgctggcctgtcgcctaccgcgctgctccagcagtatcagcagtaccaacagtcgctcc
aggattctttacaaaaacagcagcagcagcaaaaacaagtggagcagcagcagcagaagg
cagcttcagccaagtcgctaaacgcacagagtgacgtgctcaaaactaaagaggttccgg
aacccaaggaagataaaggctctttaaacgaaagcacaaaagaagaaacacaaccagata
ccaaaagtacagactttctagatgcttacattgtcccgtccatcaagcatgagtttatat
gcagaaagtgccagatgatgtttgctgacgaagactcagcagttggtcaccagaagtcct
tctgttacttcggtcaaccgttcattgatccacaagagacggtgcttcgtaacccggtaa
acaaatacaattgtctagcctgtgacctggcaattaacgggaacgaagcccttggccaac
acctccagtcaagcttgcacaaagagaaaacaatcaaacaagcaatgagaaatgccaaag
agcatgctagattattacctcactcagtctgctcccctaatcctaacaccacatctacct
cgcagtctgcagcttcttctaataacacctatcctcatctttctcgcttgtccatgaagt
cctggcccaatattcttttccaagcctccgccaggaaagctgcttcttccccttcttccc
ctccttcttccctttccttgccttcaacggttacctcaacttcgtgcagcacctcagggg
ttcaaacctcactacccacagaaagttgttcagacgaatctgacagtgagttaagccaga
agctggatgacttagataattctttggaagtgaaggctaaacctgcctctggcttagatg
gtaatttcaatagcatccgaatggatatgttcagtgtgtag
DBGET
integrated database retrieval system
