KEGG   Polypterus senegalus (gray bichir): 120520351
Entry
120520351         CDS       T08668                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120520351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psex04121]
    120520351
   03036 Chromosome and associated proteins [BR:psex03036]
    120520351
Enzymes [BR:psex01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120520351
Ubiquitin system [BR:psex04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120520351
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     120520351
    Noncanonical PRC1 (PRC1.1)
     120520351
    Noncanonical PRC1 (PRC1.3/1.5)
     120520351
    Noncanonical PRC1 (PRC1.6)
     120520351
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 RAWUL zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-Nse zf-C3HC4_4 zf-RING_6 RING_XB3-XBAT31 zf-RING_5 zf-RING_4 zf-rbx1 zf-UDP TRAF3_RING zf-C3HC4_5 Sina_RING Hid1 zf-ANAPC11
Other DBs
NCBI-GeneID: 120520351
NCBI-ProteinID: XP_039598718
LinkDB
Position
Unknown
AA seq 321 aa
MATPANVQNPSKNWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH
QDRVLARLSRLHNQQALSSSIEEGLKIQAMHRAQRVRKHQQGSDNTTFSGGEDNCDSRSH
VSHGSAHGSTHSATHSAAQEAGPSRKRSKASDESCPDLDQSHEGGVASPHESSGSEIELV
FRPHPLLVDKDQYSQTRYVKTTANATVDHLSKYLPLRIALEEEQKAAESSTPSSAGRAVN
LEDVSEKQYTIYITTSGASSL
NT seq 962 nt   +upstreamnt  +downstreamnt
atggcaacacctgcaaatgtgcagaaccccagtaaaaactgggaactcagtctatatgaa
ttacacagaactcctcaggaagcaataatggatggaacagagattgcagtttctccacgt
agtctccatagtgagttaatgtgtccaatctgccttgacatgctgaaaaataccatgaca
accaaggagtgcctgcatcgtttttgctcagactgcattgtaactgctttgcgcagcggc
aataaggaatgtccaacctgtcgtaagaaattagtgtctaaacgttctctgcgtcctgat
ccaaattttgatgccctcatttccaagatttacccaagtcgagatgagtatgaggcacac
caagaccgagttctagcaagacttagccgtcttcacaaccagcaagccctcagctctagt
attgaagagggactcaaaatacaagctatgcacagagctcagcgagtcagaaagcaccag
caagggtctgataataccaccttcagtggtggcgaggataactgtgatagtcgctctcat
gtgagccatggatctgcccacggatctacacacagtgctacccatagtgcagctcaagag
gcagggcctagtcgtaaacgatctaaggcatcagatgagtcctgtcccgatttggaccag
tcgcatgaggggggtgtggcaagtccacatgagtcatctggctcagagattgagcttgtg
tttagaccgcacccccttttggttgataaggatcaatactctcaaacacgttatgtgaaa
accacagccaatgccactgtcgatcacttatcaaaatatctgccacttcgtattgctttg
gaagaagagcagaaagctgcagaaagcagtactcccagttcagctggcagggcagtcaat
ttggaggatgtgagcgagaagcaatatacaatttacatcaccacatcgggggccagttca
ct

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