Polypterus senegalus (gray bichir): 120522503
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Entry
120522503 CDS
T08668
Symbol
gabpa
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120522503 (gabpa)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
120522503 (gabpa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
DUF2097
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120522503
NCBI-ProteinID:
XP_039599352
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Position
2:10564761..10645078
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AA seq
512 aa
AA seq
DB search
MYWRPPRSLPLTSNKDQDGVEKQTATRVAPNPEWLTERAKLPFEKVWEEKGAIMSKGESE
ELIEIEIDGQEKQDCLEEGIVEQTITAAEFVTQAIDINEPIGNLKKLLEPRLQCSLEGHE
ICLQDIQLDPDHSLFDQGVKTDGTVQLSVQVISRQGVEPKLNILEIVKPVETVEVVIDPD
AHSGVAEEAHLVEEGQVITLDGKHLTGNIIADETSEQVTRWAAALEGYRKEQVRLGIPYD
PVQWTADQVIHWAVWVIKEFNMVEVDVGRIHIPGRELCSFTQDEFLLRVPHGEILWSHLE
LLRKYVLASQDQTGQIATVTIDQPVQIIPATIQQTAPTTIKVLNNSVKQNKVQRAPRISG
SEDRSSPGNRTGNNGQIQLWQFLLELLTDKDSRDCISWVGDDGEFKLNQPELVAHKWGQR
KNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNHLVTECEQ
KKLARMQLHSLGQPMTTVTLAAASLQGDKDSS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtactggcggccaccacgttccctcccccttacgtccaataaagaccaagacggagtt
gagaagcaaacagcaacgcgagtggcaccgaacccagagtggctgaccgagcgtgcgaag
cttcctttcgaaaaggtgtgggaggagaaaggagccatcatgtcgaagggtgagtcggag
gagttgattgagattgaaattgatggccaagagaagcaggactgtctagaggaaggaatt
gtggagcagaccattacagcagctgagttcgtcacccaggccatcgacatcaatgagcca
attggcaacttgaaaaagctgctggagcctcgccttcagtgctcattggaaggtcatgag
atctgtttgcaggacattcagctggatcccgaccacagcctttttgaccagggtgtgaag
actgacgggacggttcagctgagcgtgcaggttatctccagacaaggtgtagagcccaag
ctgaacattctggagattgtgaaaccagtcgagacagtcgaagtagtaatcgaccctgat
gctcattcaggggtggcggaggaagcacatcttgtagaggaagggcaagtcataactctg
gatggcaagcatttgacggggaacattattgcggatgagacatcggaacaagtgacacgc
tgggctgctgctctggagggttaccgcaaggagcaggtccgcttgggaattccctatgat
ccagtgcaatggacagcagatcaggtgattcactgggcagtgtgggtgataaaagagttc
aacatggtggaggtggatgtaggtcggattcacatcccgggtagagaactgtgcagcttc
acccaggatgagtttctgctgcgtgttcctcatggcgagatcctatggagtcacctggag
cttctgcgtaaatatgtcctagcaagtcaggatcaaaccggacagatagcgacagtcacc
attgatcagcctgttcagatcataccagctaccatccagcagacggcacccacaacaatc
aaggtgctgaacaacagtgtgaagcagaacaaggtgcagcgagcgccccgcatttcaggc
agcgaggaccggagttctccaggaaacaggactggtaataatggacaaatccagctttgg
cagtttttgctggagctgctaacagacaaagactccagggactgtatctcatgggtggga
gatgatggcgagttcaagctaaaccagcctgagctcgtggcacacaagtggggccagcgg
aagaacaagccaaccatgaactatgaaaagctgagccgagcactcaggtattattacgat
ggcgatatgatctgtaaagtccaaggcaaacgttttgtctacaagtttgtgtgcgacctg
aagaccctcatcggctacagcgcagcggagctcaatcacctggtgacggagtgcgagcag
aagaagctggcacgcatgcaactgcacagcctgggccagccaatgacgactgtaactctg
gccgctgcctccctgcagggcgacaaggacagcagctga
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