Polypterus senegalus (gray bichir): 120522686
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Entry
120522686 CDS
T08668
Name
(RefSeq) polycystin-1-like
KO
K04985
polycystin 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psex03037
]
120522686
04812 Cytoskeleton proteins [BR:
psex04812
]
120522686
04040 Ion channels [BR:
psex04040
]
120522686
04091 Lectins [BR:
psex04091
]
120522686
Cilium and associated proteins [BR:
psex03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120522686
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120522686
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120522686
Lectins [BR:
psex04091
]
C-Type lectins
Others
120522686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD
REJ
PKD_4
PLAT
LRR_8
WSC
Lectin_C
LRR_4
InlK_D3
GPS
Motif
Other DBs
NCBI-GeneID:
120522686
NCBI-ProteinID:
XP_039599396
LinkDB
All DBs
Position
Unknown
AA seq
3145 aa
AA seq
DB search
YLQGNNLSNLPYGIFCLKPLSILDLSNNQISTLGVCSNLFNLSEINLSFNPFVCECQLLR
FVSWIAENRVTVHQAESTQCATPADVQGVHLLNNSLSRIMCDQSYVSCQLDEHTGKKELV
IYKSVTPGNFTKESCNALCVSTRNVYGAIGQKNECLCSNNFETNLISEAQCSSACSDTSI
MHGCGWTLAEQPFLVSFLASLSPPGTIDLYEVARLNVSISAPVSALMWDFGDDSPQINTS
KRSVAHKYALPGQYWVNVTLVSEIKNIFVHTEISVVAPERWELRCPVAVVANHSIDISMV
AWDGPNGTAQWWIVPHDENAGQVNFCSLDDGGAARSAPCYQLVKGGAALEEAQQNCSKGG
AAGRLAVLRSPQTCTVLAAGMESDGHAWIDFQQGATKDGRNVTNEEAACFSLNATGHVNP
TACSARHGFICEYLPEEKILNPDYFMEGTVTFNSMSPFATINTVASLGTPSGSIELLMFP
GVSFRQEGVLASVEFVTRHLNRTTQVRFQFFRPHCEHYGLHLALPGCGEACTSTSVCQPK
ASGAPQAPCPPGYQWCQFSANCLPLRNSCQPALCSNCSGVDSPPAGAHLPELRFVKELLL
VLPPGGPTHYLAHVWGDNTTVLPGDTVAVQHDADPGSLIDCHPDASSPWRQDHLHMNLSE
WTRDPENNESNVQKVRDSVCNLRFRYTSQRESPFDHEVLKMGLPTQGNYTFYARTKSRTL
ADALSCTFQVVAPLALTVVYPTPQDGIIYVSRDQSFILVKVHSKGNVTAHWDGSNQTFTF
TSKCPAEAAHLKECAADSSDGTQFAVVDLDLLNSTSVSFLLTAEDGVSRENLTLAVKVED
AVRGLRVLPDPNQRVLVNLLVSYTAQVDAGSEVSFRWTVDDKPSFTYYNTVLNVIYQNAA
VYKLSVTAMNHVSNVTEDFNVTVDTMWKMSHLTVTGVPDVTAQNATLAFSARVQVDSAVE
ATFRWMFGDGGNETAHVKPPYGATLDVPQAVVESNVTYAYREAGEYTLTLIVSNHHENLS
HAVPVSVRLLLTDVLIEVTSPILVVNQTAVFSARTLPSSDGVLYTWSFADDSEPSQGQEL
ESYVFRKSGLYNVSVQANNTVSWAQTKIGVMVFEEITGLAASSSSPTELHTETAIVASVE
TGNDIFWTFDMGDGTVLSGQRPSVRHRYVKEANYTVNVSAANAASASWVTLSVEVFVLEV
LRLEPSRCIQQLLDVSFVAFVSGNSSLYVYDWNFGDGSPNLTVRGSSEVAHLFENSGLYH
LSLALSSSVNKANFFTSVCVEPLIANVSLIVLNPYTRLGEESRFSAKAFPDYAYSYVWDF
GANDSSLRGSGEVAFTYQATGRYVVTVTVLNNISSINDTGLVEVQEPVGPVGIEHNGTKW
NNLTVSQSYAFTASGGHRMTNYTWDFGDGTVQSGPSVTHAYEVTGLFNVSLVVGNDVSSS
ESQVTVAVRSPIRDLKVTASRINVPLNGSVCFEASHSAGDDIRYSWILCDRCTPINGQVT
ISYTFRSIGTFNVIVTAENDISSMQASIFIYVLKELEGLQIVTEDLVDGCCIATNRSLQL
QAVLRDGTNMSYAWVILRHQTVVQEFTSKVIGWVFPEAAPYEVVLRATNLLGSTSVNRTV
DVLDPVGSVAMTVMPNPVKVNASSTVRLVVSAGTALYYAWPTEDQGTAVTNESQRTYKFA
EPGLKVLQIVVANKVSCKNEMIQLSVQEPVAQASFVVLDHLSPYYVATGSAVTFVGAVQT
GTNLTWLWNLQELTLFGQRVTHHFSAPGVFTVTLNVSNDVSWAVASKNISIQDKVEGLEL
KASKNIAAIRENVLFMIGISSGTSVSFHLTISGDSSVLFYNHNYTHQFTKVGNFIVNLTA
QNQVSMERTSTTVCVMEPVSRLRIVNCCEDAIPVGVSRIFSAETQTGSPLTFLWTFDLHS
GLKQTIIGKQVSYMPLQAGPLTIYLSAFNALGSQNITRELQAQNRLVSSAVDARPADTFV
NKPLLFHALALPSASQVSYLWNFGDGSDRVRTTFANISHAYLLEGNYTVEVNASNLVSFV
MAWKKITIRVLGCDEPEVLPVLSHIVLKRSQGNYLEAAVDLRGCTKYDVTYLWQIYRSAT
CADRREPMRVRLPADVRGPQLALPKMSLDLGSYCVLFSLSYVGVPLTKTIAIALSVVPSR
LVPIIDGGTFRVWSKTQNLVLNGDKSYDPNLEADSQSPLNYSWACVSSSKTPSSGCKLNC
TSKDKTLVIAENLLEVNVEYTFLLGVSKPNMSPEYTNQTVLVKNGTIPIVSIECISCKAQ
SVYEVSQSSYIYLAGTCSNCQDNLHTGRWFARSSENQSLELNMTTTSTGRFGMNLVVRQG
VLKDGDTYIFSLHVRDPLMENEGFASIVLRPNLPPAGGFCTISPSSRVNALTTKVHFSCS
GYQDSEDSGTPLIYSLTASRCSARDHCEVFSVYKGSNPEYSAFFPIGFRESNYQLNVSIT
VQDQQGAAIVALNQSLKVALPELPGDFQSLTHWMYHQMEGTLQDLLKLGDPQQIREYCLA
LITLLNEYEQNDNQILESQSERSWRVMIRSNVTLALISLKVNTVDDIQQTSAALAQCTAV
SREFICEECQRKTLNKLEYMLTILQNDTKQGTVTPTEIADNILNIMGDLIHVVNQPADPE
ESEDKSHCCTDQHQLLASKAYTLSSELMRILMHSRVLNEEPLVLRGSEITTKGIRADPLN
LLCYLPAPGCPFSIPKDFNSTLGDRTDVIQVLFQVHSNPFPFSYVSNYSVSTEVASMAFQ
TEDGTQIPIQSLGSRRAIKVTVSNTTGARKVRSGVQHVEAWGSVTVMVKTGNQNKAAGVH
IEVTFNLSDGEALGGRAEPYISVCLHGGQSQQAHNCSAQRRITLSSGSGADHKLYTFFIS
PEVSDTTADYYLNITNECPAAVDLQLGVYTSLCQYFDDQDKRWKTDGMVPLEDTTPLKAV
CQTEHLTAFGATLFVPPNSVQFIILPPQPGLNYIVLLTCTMCFITVSVVIVIVCKLDLID
IQHVGVVPFCGKDGLYKYEIQVKTGWGRGSGTTAHVGISLYGSDGRSGHRHLDGRNAFVR
NSMDIFHIATDHSLGNIWKIQIWHDNKGLSPSWFPQYVIVKDLQSGKKNFFLINDWLSVD
NDDNGGLVEKEILAASKSWPTPLLV
NT seq
9439 nt
NT seq
+upstream
nt +downstream
nt
gtatcttcagggtaacaatctaagtaaccttccatatggtatcttctgtttgaaaccctt
gtccattctagatttaagcaacaaccagatttctacattgggagtgtgcagtaatttatt
taatttaagtgaaataaacttgagcttcaatccatttgtgtgcgaatgccagcttttgcg
gtttgtgtcgtggatcgcggaaaaccgggtgacggtgcaccaagccgagtccacgcagtg
tgccactccagccgatgtgcaaggggtgcacttgttaaacaacagcctctcaagaatcat
gtgtgaccaaagctacgtgtcctgccagctcgatgagcacacggggaagaaggagcttgt
catctataagtccgtcacaccggggaacttcacgaaggagtcctgcaacgccctgtgcgt
cagcacacgcaacgtctacggggccatcggccagaagaacgagtgtttgtgcagcaacaa
ttttgagacgaacctgatcagcgaggcccagtgctcctcggcgtgctccgacacctccat
catgcacggctgcggctggactctggccgagcagccctttctggtcagtttcttggcctc
tctaagccccccgggcaccatcgacctctatgaagtggccaggcttaacgtcagcatttc
tgcaccggtcagtgccttaatgtgggatttcggcgatgacagcccgcagataaacacgag
taagaggtccgtggcccacaagtacgcactccccgggcagtactgggtcaacgtcactct
cgtgtcggagatcaagaacatcttcgtccacacggaaatcagcgtggtcgccccggaaag
gtgggaactgcggtgtcccgtggcggtagtagccaatcacagcattgacatcagcatggt
ggcctgggatggccccaacggaaccgcgcagtggtggatcgtaccccatgacgagaacgc
agggcaagtgaacttctgctcacttgacgatggtggagctgctcgaagtgccccctgtta
ccagcttgttaagggtggtgcagcactggaggaagcccagcagaattgctccaaaggggg
cgccgcaggacgtctggctgtgctgagaagcccacagacttgcacagttctggcagcggg
catggagagcgatggacacgcatggattgacttccagcagggggccactaaagacgggag
gaacgtcacaaatgaagaagctgcttgcttttcccttaacgccactggccatgtgaatcc
cacggcatgctctgccaggcacggcttcatctgtgaatacttaccggaagagaagatcct
gaacccagattacttcatggaggggaccgtgaccttcaattcaatgtcaccttttgccac
catcaacactgttgcatctctggggacaccgtcagggagtattgagctcctcatgttccc
gggtgtgagcttcaggcaggaaggagttctggcctcggtggagtttgtgacgcgccactt
gaatcggaccacccaagtgaggtttcagtttttccgtccacattgtgaacactatgggct
gcacttggctcttccaggttgtggagaggcctgcacttccacctctgtctgccagcctaa
ggccagcggtgcccctcaggctccatgcccaccagggtaccagtggtgtcagttctccgc
caattgcctgccgctgaggaattcttgccagcctgctttgtgcagcaactgctctggcgt
ggactcccctccagctggcgcccacctacctgaactgcgctttgtgaaggagctcctcct
ggtgctgccacccggtggtccgactcattatctggcgcacgtttggggtgacaacacaac
cgtcctcccaggtgacacagttgccgtgcagcacgacgcagaccccggctccttaatcga
ctgccaccccgacgcgtcttcgccatggcggcaggaccatcttcatatgaacctttcgga
gtggacaagagacccagagaacaatgaatcaaacgtgcagaaggtcagggactcggtttg
taaccttagatttcgatacacgagccaaagagaaagcccgtttgaccatgaagtgctaaa
gatgggcctcccgacccaaggcaactacactttctacgcacggacgaaaagcagaactct
ggccgacgctctttcctgcactttccaagtggtagctccactggccttgacggtcgtcta
cccgactcctcaagacggcatcatctatgtctcacgagaccagagcttcatactggtgaa
agtccactccaaaggcaacgtgacagcccactgggacggaagcaaccagaccttcacctt
cacgagtaaatgtccggccgaggcagcccacctgaaggaatgtgcagcggactcgagtga
cggcacccagtttgcagttgtcgatctggacctcctgaattccacctccgtctcttttct
tctcaccgctgaggacggagtgagtcgtgaaaacctcacactggcggtcaaagttgagga
cgccgtcagaggccttcgtgtccttcccgacccaaaccaacgggttctggttaatttatt
agtgagttacactgcgcaagtggacgccggctccgaagttagctttcgctggactgtcga
cgacaagccctccttcacgtactacaacaccgtgctgaacgtcatctaccagaacgcggc
cgtctacaagctttcggtcaccgcgatgaaccacgtcagcaacgtcaccgaggatttcaa
cgtgactgtggacacgatgtggaagatgagccacctgactgtcaccggggtccccgatgt
cacggctcagaacgcgacgctcgccttcagtgcccgagttcaggtggattcggccgtgga
ggcgactttccggtggatgttcggggacggaggcaatgaaacggctcacgttaagccccc
ttacggcgccaccctcgatgtaccacaggccgtggtggaaagcaacgtcacttacgctta
cagggaagcaggagaatacacgttgaccctgatcgtttccaaccaccatgaaaacctgag
ccacgcggtgcccgtgtccgtccgcctgctcctcaccgacgtcctcatcgaagtgacttc
acccatcctggtggtcaatcagacggccgtattcagcgcccgcaccctgccctcttcgga
cggggtcctttacacgtggagcttcgccgacgactctgagccttcccagggccaggagct
cgagagttacgtcttccgaaaaagcggcctctacaacgtgagcgtccaggccaataacac
ggtcagctgggctcaaaccaaaatcggcgtcatggtgttcgaggagatcacggggctggc
ggcctcctccagctcgcccaccgaactccacacggagacggcgatcgtggcctccgtgga
aacgggcaacgacatcttctggacattcgatatgggagacgggaccgtgctgagcggtca
gcggccctcggtgcggcacagatacgtcaaggaagccaactacaccgtgaacgtgagcgc
tgccaacgcagccagcgcctcctgggtgaccctgagcgtggaggtgtttgtgctggaggt
gctgcggctcgagcctagcaggtgcattcagcagctcctcgacgtcagcttcgtcgcgtt
tgtgtctgggaattcctccctctacgtctacgactggaactttggggacggctccccgaa
tctgacggtccggggcagctcggaggtggcgcacctctttgagaacagtgggctttatca
cctctccctggcactctccagcagcgtcaacaaggcgaacttcttcaccagcgtgtgcgt
tgagcccctgatcgccaacgtgtccctgattgtgctcaacccgtacacccggctgggtga
agagagccggttttccgccaaggccttccccgattacgcgtacagctacgtttgggattt
cggcgccaatgattcgtctctgcgagggtccggtgaggtagccttcacttaccaggccac
gggacgctatgtggtgacggtcaccgtgctcaataacatctcgtccatcaatgataccgg
gctggtggaggttcaggagcccgttggcccggtcggcatcgagcataacggaacaaagtg
gaacaacctcacggtatcccagtcctacgccttcaccgcgtctggcggccacaggatgac
caactacacctgggactttggagacggcaccgtccagtcgggccccagtgtcacgcacgc
ctacgaggtgacgggcctcttcaacgtttctctcgtcgtcggcaatgacgtcagcagcag
cgagtcgcaggtgacggtggcggtcaggagcccaatccgtgacctgaaggtgaccgccag
tcgcatcaatgttcccttgaatggatcggtatgctttgaggcgtcccactctgcagggga
cgatatccgctattcctggatcctgtgtgaccggtgcacgcccatcaacggccaggtgac
catctcctacacgttccgctccatcggcacgtttaacgtcatcgtgaccgcggaaaacga
catcagctccatgcaggccagcatctttatctacgtgctgaaggaactggaggggctgca
gatcgtcacggaggacctcgttgacggctgctgcatcgccaccaaccgaagcctgcaatt
gcaggccgtcctcagggacgggaccaacatgtcctacgcctgggtgatcctcaggcacca
gacagtggttcaggagttcaccagcaaggtaatcgggtgggtcttccccgaggcggcccc
ctatgaggtcgtgctgagagccaccaacctgctgggcagcaccagtgtgaacagaacggt
cgacgtcttggaccccgtggggagcgtcgccatgacggtgatgcccaaccccgtgaaggt
caacgcctcctccactgtccgcctggtggtaagcgccgggaccgccctttactacgcctg
gcccaccgaagaccaagggacagcggtgaccaacgaatctcagaggacctacaagtttgc
cgagccgggactcaaagtcctgcagattgtagtcgccaacaaagtgagttgtaaaaacga
gatgatccagctgagcgtgcaggagccggtggctcaggcctcctttgtggtcctcgatca
tctgagcccctactacgtggcgacggggtccgccgtgacatttgtgggggcagtgcagac
gggtaccaacctcacgtggctgtggaatctgcaggagctgacgctgtttggccagagagt
gacgcaccactttagtgccccgggggtcttcacggtgaccttaaacgtctccaacgacgt
cagctgggccgtagcgtcaaagaacataagcatccaagataaagtcgagggtctcgagct
gaaagccagcaagaacatcgccgccattagggagaacgtgctcttcatgatcggcatctc
ctcggggacttccgtcagcttccacctgaccatcagcggcgactcgtcggtcttgtttta
caaccacaactacacccaccagttcaccaaggtgggcaacttcatcgtcaacctgacggc
ccagaaccaggtgagcatggagaggaccagcaccacggtctgcgtgatggagcccgtcag
ccgcctgcgcatcgtcaactgctgcgaagacgccattccagtcggggtcagccgcatctt
cagtgccgaaacgcagacgggctctccgttgaccttcctctggacctttgacctccactc
ggggctcaagcagaccatcattgggaagcaggtgtcctacatgccgctccaggccggacc
cctgaccatttatctcagtgcctttaatgccctgggaagccaaaacataaccagggagct
gcaggcccagaaccgactggtcagctccgccgtggacgcccggccggccgacacctttgt
caacaagccgctgctctttcacgccttggcgctccccagtgccagtcaggtgtcgtacct
gtggaactttggcgacggctccgacagagtcaggaccaccttcgccaacatctcgcacgc
ctatttgctcgaggggaactacaccgtggaggtgaatgccagcaacctcgtcagctttgt
gatggcttggaaaaaaatcaccatccgagtcctgggctgtgacgagcccgaggtgctgcc
cgtcttgtctcacatcgtcctcaaaaggtcgcagggcaactacctggaggcagcggtgga
cctgcggggctgcaccaagtacgacgtcacctacctgtggcaaatctatcgctctgcgac
ctgtgccgaccgtcgggagccaatgagggtccggctgccggccgatgtgcggggtcctca
gctggcccttcccaaaatgagcctggatctgggcagctactgtgtgctcttctccttgtc
ttacgtaggagtgccgctcaccaagaccatcgctatcgccttgagtgtggtccccagcag
actcgtgccgataatcgatggggggacattccgggtttggtccaaaactcagaatctggt
gctgaatggcgacaagtcgtatgatccaaaccttgaagcagacagccagtctccactgaa
ctactcgtgggcatgtgtgtcttcctcaaagacgccatcctctggctgcaagttgaactg
cacgtccaaagacaagacactggtgatcgccgagaacctgttagaggtgaatgtggagta
cacgttcctcctgggcgtcagcaagccgaacatgagccccgagtacaccaaccagacagt
cttggtgaagaatggcaccatccccattgtctccatcgagtgcatctcctgcaaggccca
gtcagtctacgaagtgagccagagctcctacatctacctggcaggaacctgcagcaactg
tcaagataacctgcacacggggcgctggtttgcacgcagctcggagaatcaatccctgga
attgaacatgaccacaacttccactggacgctttggcatgaacctggtggtcaggcaggg
agtcctaaaagacggagacacatacatcttcagcctgcatgtgcgagaccctctgatgga
gaacgaggggtttgcttcaatcgttcttaggcccaatctgccaccagctgggggattctg
caccatcagccccagcagcagagtcaacgctttgaccacaaaagtccacttcagctgctc
cggttaccaggactcggaagattccggaacgccgctgatctacagtctgacggcttcacg
ctgcagcgcccgggaccactgcgaggtcttcagcgtctacaaagggtccaacccggagta
ctcggccttctttcccattgggttcagggaaagcaactaccagctgaatgtgtccatcac
cgtgcaggaccagcagggggcagccattgtggccttgaaccagtccctgaaggtggctct
tcccgagctgccaggagacttccagagcctcactcactggatgtatcaccagatggaagg
caccttgcaggatctgctgaagcttggggaccctcaacagatccgagaatactgcttggc
actcatcacactgctgaacgagtacgaacaaaatgacaaccaaatcttggagtctcagag
tgagaggagctggagagtcatgatccgcagcaacgtcaccctggccctgatctccctgaa
ggtgaacaccgtggacgacatccagcagacttcggcggcgctggctcagtgcacggctgt
tagcagagaatttatttgtgaagaatgccagcgtaaaaccttaaacaaattggagtacat
gttgacaatcctgcagaacgacacaaagcaaggcaccgtgacgcccactgaaatcgccga
caacatcctgaacataatgggtgacctgattcatgttgttaaccagccggcagaccccga
agaatcggaagacaagtcccactgctgcacagaccagcaccagctgctggcgtccaaggc
ctacacgctgtcctcggagctgatgcgcatcctcatgcactcccgtgtcctcaacgagga
gcccctggtcctccgcgggtcggagatcaccaccaagggcatccgggccgaccccctgaa
cctgctctgctacctgcccgcccccgggtgccccttctccatccccaaagacttcaacag
caccctgggggacaggacggacgtcatccaggtgctcttccaagtgcactccaacccgtt
ccccttcagctacgtgagcaactattcggtgtccacagaggtggcctccatggcctttca
gacggaagatggcactcagatccccatccagagcctgggatctcgcagggccatcaaggt
cacggtgtccaacaccaccggcgccaggaaggtgcgctctggggtgcaacacgtcgaggc
gtggggttccgtcacagtcatggtgaagacgggcaaccaaaacaaggcagccggagtgca
cattgaggtcaccttcaacctgtcggatggtgaagcgctgggtggcagggcagaacccta
catcagcgtttgtctccacggtgggcaaagccagcaggcgcacaactgctccgcccagag
gaggatcaccctgagctcgggcagcggggccgaccacaagctctataccttcttcatctc
cccagaagtctcggacaccaccgcagattactacctgaacatcaccaacgagtgccccgc
agcggtggacctgcagctgggcgtatacacctctctgtgccagtactttgacgatcagga
caaacgttggaagacggatggcatggtacccttggaggataccacccccctgaaggccgt
gtgccagacggagcatctcacagcctttggtgccaccttattcgtgccccccaactcagt
acagttcataattctgcctcctcagccgggcctcaactacatcgtcctgctgacctgcac
catgtgcttcatcaccgtctcagtggtcatcgtcatcgtgtgcaagctggacctgatcga
cattcagcacgtcggggtggtcccgttctgtggcaaggacggactctacaagtacgagat
ccaggtgaagacaggatgggggcgaggatcagggaccacggctcacgtaggaatcagcct
gtatggcagcgatgggaggagcggccatcgtcatctggatggcaggaatgcttttgtgcg
gaacagcatggacatttttcacatcgcaactgaccacagtctcggcaacatctggaagat
tcagatctggcacgacaataagggcctgagtccctcctggttccctcagtatgtcatcgt
caaagacctccagagtggcaagaagaacttcttcctcatcaatgactggctttccgtcga
caacgatgacaacggtggcttggtggagaaggagatcctggctgctagtaagtcctggcc
cactcctctgcttgtttag
DBGET
integrated database retrieval system
