Polypterus senegalus (gray bichir): 120522828
Help
Entry
120522828 CDS
T08668
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120522828 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120522828 (runx1)
Transcription factors [BR:
psex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
120522828 (runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
120522828
NCBI-ProteinID:
XP_039599446
LinkDB
All DBs
Position
2:22046719..22317376
Genome browser
AA seq
468 aa
AA seq
DB search
MVFLWDAKYDAAPGRRFTPPSTTLSPGKMSEALPLAGQENSAALVGKLRVADRSIVEVLA
DNPGELVRTDSPNFLCSVLPNHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAE
LRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREP
RRHRQKLEEQSKTGSLAFSERLSELEQLRRTAMRVSPHHPSPTPNPRPSLNHATPFGSQP
PSQLQDSRQMQTSPSWSYDQSYPYLGQISTPSVHPTTPISPSRASSMASLTDLSSRLSAA
PELTAFSDARMSIDRQFPTLPPLPDSRFSDPRMHYPGAFTYTPTPVTTGIGIGMSAMTGA
ARYHTYLPPPYPGASSQGQSGAFQTGTSPYHLYYSTSTGSYQFSMMSGGERSPPRILPPC
TNASTGSALLNPNLPSQSEVVEAEGSHSNSPINMATASRLEEAVWRPY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggttttcctgtgggatgcgaaatacgatgctgctccgggacgcaggttcaccccgcct
tcgaccacactgagtcccgggaagatgagcgaagcccttcctctggcggggcaggagaac
agcgcggcgctggtgggcaagctacgcgtggcggacaggagcatcgtggaggtcttagcg
gacaacccgggggagctggtcaggacggacagccccaactttctgtgctctgtcctgcca
aaccactggaggtgcaataagacgctgcccatcgcctttaaagtggttgcccttggtgac
gtcccagatggcacactggtaactgtgatggcaggaaatgatgagaactattccgccgaa
ctgcgcaatgccacagctgccattaagaatcaggtggcccgcttcaatgatctgcggttt
gtgggtcgtagtggaagaggtaaaagcttcaccctgaccatcacggtatttacaaatcct
cctcaggtggccacgtaccacagggctatcaaaatcacagtggacggtccacgagagccc
agacgacatcgtcagaagctggaggagcagagtaaaacaggcagccttgctttttctgag
agactgagcgagctggagcaactcagacgcaccgccatgagggtcagcccacaccatccc
agccctacacccaaccctcgtccttccctcaaccacgccacaccttttgggagtcaaccg
cccagtcagctgcaagattcacgacaaatgcagacatctccatcatggtcctacgatcag
tcctacccgtacctggggcagatctccacaccgtctgttcatccgacaactccaatctct
cccagcagagcaagcagcatggcctctctcacagacctctccagcaggctttcagcagct
ccagaactcacagccttcagtgatgcccggatgagcatcgaccgtcagtttcccactctc
cctcctcttccggacagccgattctctgaccctcgtatgcactatcccggagctttcacc
tataccccaactccagtgaccactgggattggaattggcatgtcggccatgacgggtgcc
gctcgctatcacacgtacctgccacctccttacccaggagcatcttctcagggccagagt
ggcgcattccaaactggcacctcaccttaccacctctactacagcacatcaactggatcg
taccagttctctatgatgtctgggggcgagcgttctccaccacgcatccttccaccttgt
accaacgcctccactggttcagcactcctcaacccgaaccttccaagccaaagcgaggtg
gtggaagccgaagggagtcacagcaactcaccgattaacatggcgaccgcaagtcggttg
gaggaggccgtatggcggccttattaa
DBGET
integrated database retrieval system
