Polypterus senegalus (gray bichir): 120522837
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Entry
120522837 CDS
T08668
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120522837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120522837
Membrane trafficking [BR:
psex04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120522837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
CCDC39
ATG16
Motif
Other DBs
NCBI-GeneID:
120522837
NCBI-ProteinID:
XP_039599461
LinkDB
All DBs
Position
2:30769636..30867308
Genome browser
AA seq
1662 aa
AA seq
DB search
MEDQNQDSPGFSTPGTVKSKLDALSKEDLVKFTKKQMAVLQKVKSKCAELEKEVQELKDK
TQTGAEEAIIQELTERMDAVLLEKAESQQRLVVLRKESEKAKKEAQEAQEKLSEMQQQLD
LSREDQQKQIEVLKNDLESLKLKHTEEVADFQRLLHESREKQEKLTNELELRNSHESEIS
VLEKQVKMDQEDYLEQINNLKQQLSLFEKEREEEAALKESQRTVMEELKKEVEVLHGELL
NMRVAHDNEVKELSDQLDTAATEYEEERERLLRLIEDQQQQLIEKEKNLHDVKEEEEEEE
EAKRDLEKCQSEGFVCEKQDDEMSKLKTSLNSLQSQVSILQDELTYLSNLKLSLEMELQH
TKDEFLHEREELEFKVNELQLYKEDAEGNVAKCKAELQATHDSWEVALSQHQVELQALQE
QYQKEIASLEQTLLSSNEKEKAQLLAEIKELKTQCEALSYEKREAVSSYEKSQEILQNLQ
LELGVTTENVAKQFNALKERGASEIHVLQQKLRVAYNEKDSLLETIKNLECQVEAACQNA
TEEFKLSLSKCKEANTELTSQLQHKDIIIQEIKAEVEALHLEKENFTVTLKDSEIEVERL
KELLHEEQIQSGEVQQKIDDLKEDLEKLKLGMEDKENQLKHVTAENDSLCRQLECMESKL
QDSSTEKEKNLLVFKEEIIHLQEELRVSQEENLNLIQCKEKSEDQERSLQLVLQEKDALK
KNVEEKLHQLSEVRVQALKFWQQDPCLQKIECNEDIKEDASLLIQSLLSKISDERHRVIL
QTDEQIAQLQNAIERQKEENQLQFSEHQSFIEDLSKERTLLKENLEEVIADKEGLQRDLL
EMQNRNEKTRAENEALLVQIGELSEKMKVAECTIEKEQKVTSVCVEKDLQNTLAEKEKEI
LSLQQEISALKEAEQNYLATQDSNDKELKKKLEKELLDKDEKMNKIKAVAVKAKKELDAS
RKEVQALKEDLESVKSNRDRLSCSMKDVIQSAESYKNLVAEYDKLTEQLELEKQRANNCE
RQVGEVKSLLQAAVLQEDQLRSENEDLAARSETLQHNVKQLEVQIMDIQKAKLFLEKELE
GERLLKEQTIKDHSTALKEVEDLQSQLQKQKQQFSQTTQELEQLRKGAQQSTLMDIEIAN
YDRLVKELNQKISVKEKQIEEDKEEINMYKQKQENLHEEITSLKSLLEQAEDKNTKIKQL
LVKTKKDLSDSKKCEADQLIVHAGLKGELEACQQQLEDFKLQCADLTADKHKLQEQLRTM
AEQHHRATNAFQQKITALQEECNTAKEEQASTAAEFESYKVRVHNVLKQQKNKSSSQTEN
DVSKQEREYLENVMEQLKSKLQETQKSLKVNTDDLQTLQMEHDTLLERHNKMLQETVAKE
AELRERVCTVQSENAVLKTEHSQMLSQLTAQNESQRNTFRDQMRHLQEEHRKTVETLQQQ
VNKLEAQLFQLQKEATAASPPPGQQLKKSLQERKYTDQTVYDLQSMDREEGEGMETTDTE
SGSLMITSIPSLEQLLNSPEPKTEPSLWQAEPSKEQLTQKLNSATKNIDHLNGLLRESEA
TNAILMEQITLLKNEVRRLERNQEREKSVANLEYLKNVLLQFIFLKSSSERQALLPVIHT
MLQLSPEEKSKLSAIAQGEDEATSTSRSSGWTSYLHSWSGIR
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaaaatcaagactctccaggtttttcaactcctggtactgtaaaatcaaag
ttggatgcgctgtcaaaagaagatcttgtaaagtttacaaaaaaacagatggcagtgttg
cagaaagtcaaatcaaaatgtgcagagctggagaaagaggttcaggagcttaaagacaaa
acacaaactggagcggaagaagcaataattcaggagttgacagagaggatggatgctgtt
cttctggaaaaggctgaaagtcagcaaagattagtagtgctacgaaaagaaagtgaaaaa
gcgaaaaaagaagcacaggaagcccaggagaaactatctgagatgcagcaacaacttgac
ctatccagagaagaccagcaaaagcagattgaagttttgaaaaatgatttagaatcactt
aaattgaaacatactgaggaggtggctgattttcaaagacttttacatgaatctcgtgaa
aaacaagaaaaacttactaatgagttagaactccgcaatagccatgaaagtgaaatatct
gtactggaaaaacaggtcaagatggatcaggaagattacttggaacaaattaacaactta
aagcagcaactaagtctctttgagaaggaaagggaggaggaggcagcactcaaagaaagt
caaagaacagtgatggaagaattgaaaaaagaggtcgaagttcttcatggagagctgttg
aatatgagggttgctcatgataatgaagtaaaagagttaagtgatcaactagatactgca
gctactgagtatgaagaagagagagagaggctcttacgtcttatagaggaccaacaacaa
cagttaattgagaaagaaaaaaatcttcatgatgtgaaggaagaagaagaagaggaggaa
gaagctaaaagagacttagaaaagtgccagtcagaagggtttgtctgcgagaagcaagat
gatgaaatgtcaaagctaaagacgtcattaaatagtttacagtcacaagtaagcatcctt
caggatgaattaacatacttgagcaatctgaagttaagcctggagatggaactgcagcat
acaaaggatgagttccttcacgagagggaggaactggagtttaaggttaatgaattgcaa
ctctacaaggaagatgcagaaggtaatgtagccaaatgtaaagcagagcttcaagccact
catgattcctgggaagtggcactaagtcagcatcaggttgaactacaggctcttcaggag
cagtatcagaaggagattgcatctctggagcaaactttgctttcttctaatgaaaaggaa
aaggctcaacttttagctgaaataaaggagctcaagactcagtgtgaagctctgtcatat
gaaaaaagggaagctgtcagcagttatgaaaaatcccaagaaatcctacaaaaccttcag
cttgaattgggtgttaccactgaaaatgtggcaaagcagttcaatgctttgaaggaacgt
ggagcatctgaaatccatgtacttcaacagaagctaagggttgcctataatgaaaaggat
agccttcttgagacaattaagaatttggagtgtcaggtagaagcagcttgtcagaatgca
acggaagagtttaagctttctttaagcaagtgtaaagaggcaaatacagagttaacttct
cagcttcagcataaagacataatcatccaggagattaaggcagaggtggaagcattacat
ttggaaaaggagaattttactgtcacattaaaggattcagagatagaagttgaaaggctt
aaggagcttttgcatgaagagcagatacaaagtggtgaagttcagcagaagatagatgat
cttaaagaggacttggaaaaattaaagctaggcatggaagataaagagaaccaactaaaa
catgttactgcagaaaatgatagtctttgtaggcagctggaatgtatggagagcaaattg
caggacagttccacagagaaagaaaaaaatcttttggtgtttaaagaagaaataatacat
ttgcaagaagagctaagagtcagtcaagaagaaaatttaaaccttatacagtgtaaagag
aaaagtgaagatcaggagaggtctttgcagttggtcttgcaagagaaagacgcactgaag
aaaaatgtagaggaaaagctgcaccagctatcggaagttagagttcaagccttgaagttc
tggcagcaagatccttgcttacaaaagattgaatgtaatgaagacataaaagaggatgca
tcccttttgattcaaagtctcttatcaaaaatttctgatgaaaggcacagagttatttta
caaacagatgagcaaatagcacagctacaaaatgctatcgaaagacaaaaagaagaaaat
caactacagttttcggagcatcagagttttatcgaggacttgagtaaagaaagaactctt
ttaaaggaaaaccttgaagaagttattgcagataaagagggcctacagagggacttgtta
gagatgcagaatagaaatgaaaaaactagggctgaaaatgaagctctgcttgtgcaaatt
ggggaactctctgaaaagatgaaggtggctgaatgcaccattgaaaaagaacagaaagtg
accagtgtttgcgtggaaaaagacttgcagaatactctggcagaaaaggagaaggaaatt
ttaagtctgcagcaagaaatttcagctttaaaggaagctgaacagaactatttagcaaca
caagactccaatgacaaagagttaaaaaaaaagttagaaaaagaactgcttgataaagat
gaaaagatgaataagataaaagctgtggctgtaaaggcaaaaaaggaactagatgccagt
cggaaagaagttcaagccttgaaagaagacctggagtctgtaaaatctaaccgtgatcga
ctctcctgctccatgaaggatgtaatccaaagtgcagaaagttacaagaatcttgtagct
gaatatgacaagctgactgaacaactggagctagaaaagcagagagcaaataattgtgag
cgtcaggttggagaagttaaaagtctcctgcaagctgctgtcctacaggaagaccagttg
agatcagaaaatgaggatttggctgcccgatctgaaacactgcaacacaatgtcaagcaa
ttagaagtgcaaatcatggatattcagaaggcaaaattgtttttggaaaaagaactggaa
ggagaaagacttctaaaggagcaaacaattaaggatcacagtacagcattaaaagaagtt
gaagacctgcaaagtcaacttcagaagcagaagcaacagttttctcaaacaacccaggag
ctggaacaactgaggaagggtgcacagcaaagcacgttaatggacattgaaattgcaaat
tatgaccgtcttgttaaagaactgaatcagaagatttcagtgaaagaaaaacagattgag
gaggacaaggaggaaataaatatgtataagcaaaaacaagagaatctgcatgaggaaata
acatctttgaagtctcttctagagcaagctgaagataaaaacactaagattaagcagctt
ttagtcaagacgaagaaggacctctcagattcaaaaaaatgtgaagctgatcagttgatt
gtccatgcaggtttgaaaggggagctggaagcatgtcagcagcagctagaagactttaag
cttcagtgtgccgatcttaccgcagataaacacaaattacaagaacagttgaggacaatg
gcagagcaacaccatcgtgcaaccaatgcgtttcaacagaaaatcacagctctgcaggaa
gagtgcaatactgctaaggaagaacaggcttcaacagcagcagagtttgaaagttacaaa
gtccgtgttcacaatgtgttgaaacagcaaaagaataagtcctcatcacaaactgaaaat
gatgtatccaaacaggaaagagaatatttagaaaatgtgatggaacagctcaaatccaag
ttgcaggaaacccagaagagcctgaaagtgaacacagatgatctccagacattgcagatg
gaacacgacactttgttggagcgtcacaacaagatgctgcaggagactgtagccaaagag
gctgaactgcgggagagggtttgcacagttcagtcggagaatgcagtgctgaaaacggaa
catagccaaatgctgagtcaactaacagcccagaatgaatctcagaggaataccttccgg
gatcagatgcgccatcttcaggaagagcacaggaaaactgttgagacactgcagcaacag
gtcaataaactggaagctcagctgttccagttacagaaggaggctacagcagcaagtcct
ccacctggtcaacagcttaagaagagtcttcaggagaggaagtatacagatcaaacagtc
tatgatctgcagtctatggatagagaggagggagaaggaatggaaactacagataccgag
tctggatccttgatgatcacctccataccatccctagagcaacttctgaactcgcctgag
cctaagacagaaccatcattatggcaggcagagcccagtaaagagcagctgacacagaag
ctaaacagtgcaactaagaatattgatcacctgaatggactgcttcgagagtcagaagcc
acaaatgctatattgatggaacagatcacgcttttaaagaatgaagtcaggagacttgaa
agaaatcaagaacgggagaagtcagtggccaacttggagtacctgaagaatgtcctgcta
cagtttatattccttaaatctagtagtgaaagacaggcactcctccccgtcatccatact
atgctgcaactgagcccagaggagaagagtaaactgtcagcgatagcacaaggtgaagat
gaggcaacatcgacaagcagatcgtctgggtggacatcgtatcttcacagttggtcagga
ataagatga
DBGET
integrated database retrieval system
