Polypterus senegalus (gray bichir): 120522844
Help
Entry
120522844 CDS
T08668
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120522844 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
psex04050
]
120522844 (edar)
Cytokine receptors [BR:
psex04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
120522844 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
Chordopox_G3
TNFR_c6
FHIPEP
Orf78
DUF2852
Motif
Other DBs
NCBI-GeneID:
120522844
NCBI-ProteinID:
XP_039599476
LinkDB
All DBs
Position
2:complement(31490945..31729309)
Genome browser
AA seq
458 aa
AA seq
DB search
MKGRMISQGENKRSHFYSFLLVSIIPLVKAEYSSCGENEYYNQTTGSCHICPQCQVGEEP
YLTCGYGTKDENYGCSPCPSGKFSKGGYQICRRHKDCEAFFRATVLTPGTAESDAECGAC
LPGFYILENRPKNIYGMVCHSCLTAPSNTKECMGTTASSSGSSTSSSSTSTTTIFSHAHK
ADLAGQGHLATALIIAMSTIFIMAIAIVLIIMFYILKAKPNSQACCSTHSVKTVEAQTNK
QEDKKEVPENVVIFTEKDEFDKLKPNPPKTVKNENDASSENEQLLSRSIDSDEEAALEKQ
GTTDLCLLSLVHLTRDKSSSTNSKSTGIQSRRKKILDLYTKACCIAEGLSPTELPFDCLE
KTSRMLSSTYNTEKAIVKTWRHLAESFGLKRDEIGGMSDGMQLFDRISTAGYSIPDLLTK
LVQIERLDAVESLCTDILEWAEITPANSPSISSRCASV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaagaatgatttcccaaggagaaaacaaacggtctcatttttactctttttta
ctggtctctattatccctttggtgaaggcagaatattcaagttgtggagaaaatgagtac
tacaatcagaccactggaagctgtcatatctgccctcagtgccaagttggagaggaacca
tatctgacttgtggatatggaaccaaagatgaaaactatggctgcagtccctgtccatct
ggcaagttctctaagggtggataccagatctgcaggagacacaaagactgtgaagccttc
ttcagggcgactgtcttgacgcctggcacagctgagagtgacgctgagtgtggagcttgt
ctacctggtttctacattctggagaacagacccaagaacatctatggcatggtctgccac
tcctgtttgactgcaccttccaacacaaaagaatgtatggggacaactgccagcagttcg
gggagctccaccagttcttcttccacaagcacgacaaccatcttctctcacgcccataaa
gcagatctagctggacaaggacacctggctactgctcttatcatcgcaatgtccaccatc
ttcatcatggccatcgctatagttttaatcatcatgttctacatactgaaggcaaaaccc
aactctcaagcatgttgttctactcattcagtgaagacagtggaggcgcaaaccaacaag
caagaagacaaaaaagaagtaccagaaaatgtggtgattttcacagagaaagatgaattt
gacaagctcaaaccaaatcctcccaaaacagtcaaaaatgaaaatgatgcttcatcagaa
aatgagcagctcttaagccgaagcatagacagtgacgaggaagcagctttggaaaagcaa
ggcaccacagacttatgcctcctgtctttagttcacctcacccgagacaagtcatcttca
acaaacagcaagtctacagggatacaaagtcgaaggaagaagatattggatctttatact
aaagcttgctgcattgctgaaggtctcagtccaactgagttgccctttgactgcctggaa
aaaaccagcaggatgctgagctcaacgtacaacacagagaaagccattgtgaagacgtgg
cgccacctagcagagagctttgggttgaaaagggatgagatcggcggcatgtcagatggc
atgcaactgtttgaccgcatcagcacggctgggtacagcatcccagacctgctgaccaaa
ctggtgcaaattgagcggctggatgcggtggagtccctgtgcacggatattctggaatgg
gcagaaataacacccgccaacagcccttccatctcgtcgcgctgtgccagcgtgtga
DBGET
integrated database retrieval system
