Polypterus senegalus (gray bichir): 120522884
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Entry
120522884 CDS
T08668
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120522884 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120522884 (mid1)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120522884 (mid1)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120522884 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_5
U-box
Motif
Other DBs
NCBI-GeneID:
120522884
NCBI-ProteinID:
XP_039599568
LinkDB
All DBs
Position
2:48127383..48764934
Genome browser
AA seq
686 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSHCTSNEPVESISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERGYDGNAMTMSSEKVLC
QFCDQDPAQDAVKTCVTCEVSYCEDCLKATHPNKKPFTGHRLIEPIPDSHLRGLLCLEHE
DEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKRAPGRFFSKRTEQETSDQQ
SLDANLTNLIKRNNELENLMGKLIQTCQHVEVNASRQEGKLMEECDLLIDIIQQRRQIIG
TKIKEGKVVRLRKLAQQVANCKQCIERSSSLITQAEQTLKESDHARFLQTAKNISERVSM
ATASSQVLIPEINLNDTFDTFALDFSREKKMLESLDYLTAPNPPGIREELCTASHDTITV
HWTSDDEFSVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIF
IVKAINQAGSRSSDPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTQER
FTSQGSYGVMGNVYIDSGRHYWEALIGGSTWYALGIAYKSAPKHEWIGKNSASWVLCRCN
NSWVVRHNSKELPIEPSPHLRRVGVLLDYDNGSLAFYDAVSSQHLYTFDISFAQPVCPVF
NVWNKCLTVLTGLPIPDHLECTEQQL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatctgtctggagctcttcgaagatcca
ctgctgttgccttgcgctcacagtctctgtttcagttgcgcacaccgcatccttgtctcc
cactgcacatccaacgagcctgtggaatcaatcagtgctttccagtgcccaacttgtcgt
tatgtcatcaccctcaaccagcgaggcctagagggattaaaacgcaacgtcactcttcag
aacattatcgatcgctttcaaaaagcttcagtgagtggtcctaactcccccagtgagacc
cgccgtgagcggggatacgacggaaacgccatgaccatgtcgagtgaaaaagtgctatgc
cagttttgtgatcaggatccagcacaagatgctgtgaagacctgtgtcacctgtgaggtc
tcctactgtgaggactgtcttaaagccactcaccccaacaaaaagccatttacaggtcac
aggttaattgaacccataccagactcacaccttcgtgggctactatgcctggaacatgag
gatgagaaagttaacatgtactgtgtaactgatgaacagttaatctgtgccttgtgcaaa
ttggtagggcgtcacagggaccatcaagtggctgcgttgagtgaccgctatgaaaaatta
aagagagcccctggaaggtttttcagtaagaggacagagcaggaaacttctgaccagcaa
agcttggatgccaacctgactaaccttattaagagaaacaatgagttggagaatctcatg
ggcaaacttattcaaacatgccaacatgtagaggtgaacgcttcacggcaggagggcaag
ctgatggaagagtgtgacctactgatagacattatacagcaaaggaggcaaatcattgga
acaaaaattaaagaaggaaaagtggtaaggctacggaaattggcacagcaggttgcaaac
tgcaagcagtgtatcgagagatcctcttctctgataactcaagctgaacaaaccctgaaa
gagagtgatcatgcacgtttcctgcagacagccaaaaatatttctgaacgggtttctatg
gcgacagcatcttcacaggttttgataccagaaatcaacctgaatgacacctttgacact
tttgcattagacttttcacgagaaaagaaaatgctagaaagtctggattatctaacagca
cccaatcccccagggattcgagaagaactgtgcacagcatctcatgacacaatcactgtc
cactggacatcagatgatgaatttagtgttgtttcttatgaactacaatatgcaatcttc
acaggacaggccaatgtagttagtttgtgtaactctgccgacagctggatgattgttcct
aatattaaacagaaccactacacagttcatggactacaaagtggcacaaagtatatcttc
attgtcaaggcgatcaatcaggcaggtagccggagcagcgatccaggaaagctgaaaact
aatagtcagccttttaaattggacccaaaatctgcccacaggaaacttaaagtgtcacat
gacaatctaactgtagaacgagatgagacctcatcaaaaaagagccacacccaagagcgt
ttcacaagccaaggaagctatggagtaatgggcaatgtttacattgacagtggtcgccat
tattgggaggcacttattggaggaagcacctggtatgcattgggaatcgcatataagtcc
gcgcccaagcacgagtggattgggaagaactcggcctcctgggtgctgtgccgctgcaat
aactcgtgggtagtgagacacaacagcaaggagctgcccattgaaccatcgccccacctg
cggcgagtcggggttctgcttgactatgacaatggttctctggcgttctacgatgccgtg
agctcccagcacctttacacttttgacatttcttttgcacaaccagtgtgccctgtgttt
aacgtgtggaacaagtgtttaaccgttttaacggggcttcccatccctgaccacttggag
tgcacagagcagcagctgtga
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