Polypterus senegalus (gray bichir): 120523027
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Entry
120523027 CDS
T08668
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120523027
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120523027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
120523027
NCBI-ProteinID:
XP_039599884
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Position
2:complement(72436371..72534605)
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AA seq
902 aa
AA seq
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MEYKALYFQEHQNLLSVKSGVCGKFMGLKDQLDDGIDAILDFNLDYLHVESTDRQLRAIA
PWSRLERTRMDRINARNDEGRAGSVEDTTCSSSLGDSEDSTSSDSESEHVTSAIPDTNFL
TKTHRQLCRSPCIDPTDTLRTEILYNSSEDDHGPSKEEKKPPDVGRDYQNKIEFALKLGY
TEDQVQLVLSKLGSDALINDILGELVKLGSKSEMEQPLLNSGAGSCTSSSSSSCSSSSSC
HSASVELHRSDSPFHEDIAEDAANLRPIVIDGSNVAMSHGNKEVFSCHGIKLTVDWFLDR
GHKDITVFVPAWRKEQSRPDALITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIV
KLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDN
FLRKRPVIPEHKKQPCPYGKKCTYGHKCKFYHPERGSQPQRSVADELRASAKSTAAKTIT
EAGLVKSHSMPNSCKIESSFDVKRTAPKRQSDPSIRTVSHETEEKQSAKTKAEIRSAPSL
LNKNNNPLQKPQPAPPLNNVLTPSILCYSQEQRTPMTVSKNHGTAKSYSEQYPKCDSPGD
ISYYSMISGYNKLSISGHQSPDRHFSVDRISSVASDCSSEGSMSCSSSDSFVGYNERSYM
SSPDPLVDENIKCHHHHHHPRSRALSQPFSHNYHDALTRVQSYGQEEPKLRPKPPVPYLP
PNLQHPAISARSSCPSEYNATQTHQQAHQACHLSRALVTTRIDSISDSRLYESTPLRQRK
PCPGQERFGSWDSLNYGMDAYAYHQPYSLPNKPTQPCYEQFTFQSLPENRDQAWRMPWGR
NLSQQEPSNPSRYQDIRDKIFVNLCNIFPADLVRLVMNRNPDIMDAQQLAAAILAEKSQS
GY
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggaatacaaggcactttattttcaagagcaccaaaaccttttgagtgtaaaatcaggc
gtatgcggcaaattcatgggcttaaaggatcaactggatgatggaatagatgccatcctg
gactttaacctggactacttacatgtggaaagcacagatcgacagctcagggctattgca
ccttggtccaggctagagagaaccagaatggacagaataaatgccagaaacgatgaaggc
agagcaggatctgtagaggacaccacctgcagcagctctttaggagattcagaggatagt
accagttcagacagtgagtctgagcatgtcactagtgccataccggatacaaactttttg
acaaaaacgcatcgtcagctttgtcgttcaccttgtattgaccctactgataccttaagg
acagaaatattatataacagttcagaggatgatcatggaccatcaaaagaagaaaagaaa
ccaccagatgttggcagggactaccagaataaaattgaatttgcactgaagttgggttac
acagaggatcaagtccagcttgtgttaagcaagttgggttcagatgctcttatcaatgat
atccttggagaactggtaaagcttggaagtaaatctgagatggagcagccccttttgaac
agtggtgctgggagctgtacgtcttcatcgtcatcttcctgctcttcatcatcctcctgc
cattctgcatctgttgagttacaccgctctgattctcctttccatgaagacatagctgaa
gatgctgcaaacttgagacctattgttattgatggaagtaatgttgctatgagccacggc
aacaaggaagtgttttcctgtcatggaattaaactaacagtggactggtttttagaccgc
ggccataaagatattacagtttttgttcctgcctggcgaaaagaacaatcaagacctgat
gctcttatcacagaccaggaaatcttaagaagattagaaaaagagaaaattttggtcttc
accccttcccgccgtgtgcagggtcgaagagttgtctgttatgacgaccgattcatagtg
aagcttgcctatgagtcggatggtatcattgtatcaaatgacaactatagagatttggcc
aatgaaaaaccagaatggaagaagtttattgacgagcgactacttatgtattcctttgtt
aatgacaagtttatgccacctgatgatcctttgggtcgccatggtccaagcttggataac
ttccttcgtaaaaggcctgtcataccagaacacaaaaaacaaccttgcccatatgggaag
aagtgtacatatggacacaagtgcaaattttaccatcctgaaagaggatcacagccgcaa
cgctccgtagctgatgagcttcgagccagtgctaaaagcactgcagctaagactattact
gaagcaggtcttgtaaaaagtcacagtatgccgaacagctgcaaaattgagagcagcttt
gacgtcaaacgcacagctccaaagaggcaatcagatcctagtatcaggactgtttcccat
gagacagaagaaaagcaaagtgccaaaaccaaagctgaaattcgctctgctccctcactt
ctgaataaaaataataatccccttcaaaaacctcagccagctcctccattaaataatgtc
cttactccttctattctgtgttattctcaggaacaaagaacacctatgactgtgtccaaa
aaccatggaacggcaaaatcgtatagtgagcagtatcccaaatgtgattccccgggtgac
attagctattactctatgataagtggctataacaagctcagtatttcaggacatcagagc
cctgatagacacttctctgttgatcgaattagttctgttgcttctgactgtagtagtgag
gggagtatgagctgtagcagcagtgattcttttgtagggtacaatgaacggtcttatatg
agctccccagacccactggtagatgaaaacatcaagtgtcatcatcaccatcatcatcct
cgtagccgtgctttatcacagccattttcccataactaccatgatgctttgacgcgggtt
cagagttacggacaagaagaacctaaacttcgtcctaagccacctgttccataccttcca
ccaaatttgcagcatcctgcaattagtgcccgctctagctgtccaagtgagtataatgcc
acacaaactcaccagcaagctcatcaggcatgtcacctaagcagggctttggttaccaca
agaattgatagtatttcagactcgcgcctttatgagagcactccactgagacaaaggaag
ccatgtccaggtcaggagcgctttgggagttgggacagtttgaactatggaatggatgct
tatgcctaccaccagccgtattcattgcccaacaagcccacccaaccctgctatgagcag
ttcacattccaaagtctacctgagaacagggatcaggcttggaggatgccatggggtcgc
aacttatcccagcaagaaccctccaacccttcacgttaccaagatatccgagacaaaatt
tttgtaaacctctgcaatatcttcccagctgacctagtgcggctggtaatgaacagaaat
cctgatattatggatgctcagcagctggctgctgccattctggcagagaaatctcaatca
ggttattga
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