Polypterus senegalus (gray bichir): 120523040
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Entry
120523040 CDS
T08668
Name
(RefSeq) TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120523040
Membrane trafficking [BR:
psex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120523040
Endosome - Golgi transport
Rab GTPases and associated proteins
120523040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
EF-hand_6
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
120523040
NCBI-ProteinID:
XP_039599913
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Position
2:73620098..73776138
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AA seq
1129 aa
AA seq
DB search
MWLKPEEVLLKNALKLWVTEKSNSYFVLQRRRGHGDAGGKISGLLVGALDAVLDSNARVT
PFRILLQVPGSQVYWSIASGASLEEINHHWEWLAQNLLHTLSVFDNKEDIASFVNGKVKG
LIAEETRSKQAEQEEDPEKFREALVKFETRFSLPSAEKLVTHYSCCCWKGRVPRQGWLYL
SINHLCFYSFLLGKEVKLVAPWADVTKLERTSTSFITDNIRVTTRSKERDFSMFLNIEEA
FRIMEQLADITIRRLLDNEVFELDQSLQEPAHITKRVLEERAQKEYFRAMFRLPHQERLQ
GVIDCSLWTPFNRSHTAGTMYMSDSFVCFTSREDGACILIIPFREVISVEKMENTSHLPN
PIIISIRSKKAFQFIEIKRRDSLVEAILQQLESVRSKDRVCHKSPSKALISPLPYYSIYY
DSISTDDETIEPAGNKNRHSLNEEALMSVFHHAEPQTSDSKFKMEQVKERLWQDHFSEYG
RGICMFRTEKIRKLVAMGIPESLRGELWQTFSNSLSDLSSHPEYYANLVEESMGKCCLAT
EEIERDLHRSLPDHPAFQNETGIAALRRVLTAYAYRNPKIGYCQSMNILTSVLLLYSKEE
EAFWLLVAVCEKMLPDYFNQRVIGAQVDQSVFEELIKDRLPELSEHITDLSPLSSITLSW
FLTLFLSIMPFESAVNVVDCFFFDGIKAIFQLSLAVLDANVQELCESKDDGQALMILTRF
LDQVKNRESPTPPVSSQQVCCEEKEAVQLETEITDLIRDSYEKFGDITVEQIECFRRRHR
IRVLQAHEDTTKENTLRLVAPDISLTPEEMSDVYDLFKREHFINCYWGEHISAVQHHDPS
LQYVDQYRIDRPQFTSLYHLLSPWVCGLHTDTVAHRAFRLLDKNEDSLINFREFAVFLDT
MYCGEMSDKIRLLYKLHIPPALTENDSDSLSPLKTPLLSTSRPLYVGRPNGETKSYQEQL
KQMLKDLAKDQEKSEEGLPMMTQREFIQFCKTLYSMFHEDPNENDLCQAIATVTTLLLQI
GEVGQRVRSLGSYSEVSADTSESGDMAVGPSLLEDDSLFVDRNNTDRKNSQSLTLSEAEW
TVTFEQILASLLTEQSLVNFFEKPLDLKNKIENAKLNQYNERINILLIK
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaaagcccgaagaggttttattgaaaaacgctttgaagctatgggtgacggag
aaatccaactcttattttgtcttgcaacgtagacgagggcatggagacgctggaggcaaa
atatcaggtcttttggttggtgctttggatgcagttttggactccaatgctcgtgttacc
ccattccgaattctgcttcaggttccgggatcacaggtctactggtccattgccagcggt
gcttcactggaagaaattaaccatcactgggagtggcttgctcaaaatctccttcatact
ttgtcagtatttgacaacaaggaggacattgccagctttgttaatggcaaagtgaagggt
ctgatagcagaggagacacgaagcaagcaagctgagcaggaggaagaccctgaaaagttc
agagaagcattggtcaaatttgaaacacgatttagcctcccaagtgctgaaaagcttgtg
acgcattactcctgctgctgctggaagggtcgagtccctcgacagggctggctttatctt
agtattaatcatttgtgcttctattccttccttttaggaaaggaagtgaaacttgttgct
ccttgggctgatgtaacaaaattggaaagaacgtccaccagttttattacagacaacatc
agggttacaaccagaagcaaagagcgagatttttccatgttcctaaacattgaagaagct
tttcggattatggagcaacttgctgatataaccattcggaggctgctagacaatgaagtg
tttgagttggatcagtctctacaagaaccagcacatatcacaaagagagttcttgaagag
agagcacagaaagagtattttcgtgccatgttccgcttaccccaccaagagaggttgcaa
ggagtgatagactgctccctctggacaccctttaaccgtagccatacagcaggaacaatg
tatatgtctgacagttttgtgtgctttaccagcagagaggacggagcctgcattctgata
atccctttccgagaggtgatctcagtagagaagatggagaacaccagtcatttgcctaat
cctatcatcatcagcataagaagcaagaaagcattccagtttattgaaattaagaggaga
gacagccttgtggaagccatattacaacaactggagagtgtgcgcagtaaagacagagtc
tgtcacaagtccccaagcaaagcactgatttccccactaccatattactctatatactat
gatagcatttctacagatgatgaaaccattgaaccagctggaaataaaaacagacattca
ctgaatgaagaggccttaatgtctgtcttccatcatgcagaacctcaaacatcagactcc
aaatttaaaatggagcaagtgaaggaacgtctgtggcaggaccacttttctgagtatggc
agaggtatctgcatgttccgaacagagaagattcggaagctagttgccatggggatccca
gagtcactccggggggagctgtggcagactttttccaattccttaagtgatttatcctct
catcctgaatactatgcaaacctcgtagaggagtcaatgggcaagtgctgcttagcaact
gaggagattgagcgtgatcttcaccgttcactgccagatcatccggccttccaaaatgag
actggcatagctgctttgagaagagtcttgactgcatatgcctataggaatccaaaaatt
ggatattgtcagtccatgaacattttaacatctgtacttctactgtactcaaaagaagaa
gaagctttttggctgctcgtggcagtatgtgagaagatgctccctgactattttaaccag
cgggtcattggagctcaagtagaccagtcggtatttgaagaactgataaaggaccgtctt
cctgagctttctgaacatatcacagatctgtcccccttgtcctccatcacgctgtcctgg
ttcctcaccctgttcctcagcatcatgccctttgaaagtgcagtcaatgtggtagactgc
ttcttctttgatggtattaaggcaatttttcaactaagtttggctgtgcttgatgcaaac
gttcaggaattgtgcgaaagcaaggatgatggtcaggccctaatgatactgacaagattt
ctggatcaagtcaagaatcgagagagtcctactcctcctgtttccagtcagcaggtctgc
tgtgaagaaaaggaagcagtgcagctagaaacggaaataactgacttgattagagattct
tatgagaaatttggtgacattacagtagaacaaattgagtgttttcgccggaggcacaga
ataagggtgctgcaggcccatgaagatacaaccaaagaaaatacgttgagacttgtggct
ccagacatctcattgacaccagaagaaatgagtgatgtgtacgacctgtttaagagagaa
cattttataaactgttactggggtgagcacatatcagctgtgcagcaccacgacccaagt
ctccaatacgtggatcagtacaggatcgacaggccgcagttcacaagcttgtatcacctg
ctgtccccgtgggtttgcggactgcacacggacactgtggcccacagagccttccgcctc
ctggacaagaatgaagactctcttattaacttcagagagtttgcagtttttctggatacg
atgtactgtggcgagatgagtgacaaaattcgtttattgtacaaactgcacatcccacct
gctctcacagaaaacgacagcgacagtctttctccattgaagactcccctactatctacc
agcagacccttgtatgtaggacggccgaatggtgagactaagagctatcaggagcaactg
aaacaaatgctgaaagacttggccaaagaccaggagaagagcgaggaaggattacctatg
atgacgcagagagaatttattcagttttgcaaaacgctatacagcatgtttcatgaagat
cccaatgaaaatgacctgtgccaagctatcgccactgtgaccaccctgctgcttcaaata
ggagaggtgggccaacgagttcgcagcctgggcagctactcagaggtgtccgcagatacc
agcgagtccggagacatggcagtaggccccagcctcttagaggatgactctttatttgtt
gaccggaacaacacagacaggaaaaactcccagtctctcacactttctgaggcagaatgg
acggtgacctttgagcagatcttggcttctcttctcacagaacagtcacttgttaatttc
tttgagaaaccactggacttgaaaaacaaaattgaaaatgctaaactaaaccagtataac
gagagaataaatatactgctgataaagtag
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