Polypterus senegalus (gray bichir): 120523054
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Entry
120523054 CDS
T08668
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psex03037
]
120523054 (ift88)
Cilium and associated proteins [BR:
psex03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
120523054 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_6
TPR_19
TPR_14
TPR_7
TPR_16
ANAPC3
TPR_11
TPR_9
SNAP
ARM_TT21_5th
TPR_17
TPR_CcmH_CycH
ARM_TT21_4th
TPR_10
TPR-S
ARM_TT21_C
ARM_TT21
TPR_15
MIT
BTAD
HEAT_Nup120
HAT_PRP39_C
RNPP_C
DUF2989
DUF2225
RPN7
DUF6584
Consortin_N
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
120523054
NCBI-ProteinID:
XP_039599940
LinkDB
All DBs
Position
2:75481566..75537612
Genome browser
AA seq
839 aa
AA seq
DB search
MEHVHLAAEDEDDLYSGYNEYNPVFDADELENDVGFQQAVKTSYGRRPPMTAKIPGTALA
ARPLGTSFGARVPLASSLGRPTTGAVQDGAARPMTAVRAAGYSSAVRKGFSFDPLGQSRG
PAPPLESKNEDTPEEKIKQMEKKIYELTEESCMAHSRGDLQLALEKAKEAGRKERALTRQ
REEIGLAAPVNWDLTFSVLFNLAIQHAANDMYAEALNTYQVIVKNKTFSNAGRLKVNMAN
IYFKQRNYQKAIKFYRMALDQIPNTHKEMRIKIMQNIGIVFIKMGQYSDAITSFDQIMSD
SPNIKTAFNLILCYFAIGDRENMKKAFQKLISVDLGIGEEDKYIPANDDPHTNLVIEAIK
NDQLRQMEREKQSLAEKFIMTSAKLIAPAIETSFAAGFDWCVDMVKTSQYTELANDLEIN
KAITYLRQRDFSKAVETLKMFEKKDSRVKSAAATNLSFLYFLENDYGQADRYADLAIVAD
RYNSAALVNKGNIVFVNQDYEKAAEFYKDALRNDSSCTEALYNLGLTYKKLSRLGEALDC
YLKLHTILRNSAQVMFQLATLYEILDDPNQSIDWLKQLLSVSPTDPQALAKLGELYDNEG
DKSQAIQYYYESFRYFPSNIEVIEWLGAYYIDTQVCEKAIPYFERAMLIQPTQAKWQLMM
ASCYRRSGNYQKALETYKDIHRRFPENIECLRFLVRLCTDMGLKEVQEYATKLKKVEKLK
EIREQRVKSGRDGSARGRREGSASSVISPESRLSPSLDQVKDSGQSSQGTSAKGERLSAK
LKALPGANEPYEASSNKEIDASYVDRLGPQIDRPKTAPQKRKEDDDFADEELGDDLLPE
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgtgcatttagctgccgaagatgaagatgatctttattctggatacaatgaa
tacaacccagtctttgatgctgatgaactggaaaatgatgttggattccagcaggctgta
aaaactagttatggaagaagacctccaatgactgcaaaaattccaggcactgcattagct
gcacgtcctttaggaacttcatttggagctagggtgcctctggcttcatcacttggaaga
cctacgacaggagcagtacaggatggtgctgcacggccaatgacagctgtgagagctgca
ggatattcatctgcagtccggaaaggattttcatttgacccactggggcagtcgaggggc
ccagcaccgcctttggaatcaaaaaatgaagacacccctgaagaaaagattaagcaaatg
gaaaaaaaaatctatgagctgactgaagaaagttgtatggctcatagtcgtggtgatctt
caactggctttagaaaaggctaaagaagctgggaggaaagagagagcattaacaagacaa
agagaagaaattggcttagcagccccagtaaattgggacctaacattctctgtgctgttt
aatttggcaattcagcatgcagctaatgatatgtatgctgaggctttaaatacttaccag
gtgattgtgaaaaacaagaccttcagtaatgcagggcgcctgaaggtaaatatggcaaac
atttatttcaaacagagaaattaccagaaagcaataaagttttatagaatggcattagat
cagattccaaatacacataaggaaatgcgtattaaaataatgcagaacattggaatagtt
ttcattaaaatgggacagtattcagatgcaattacttcatttgatcaaattatgagtgac
agcccaaacataaagactgctttcaatctcattctgtgttattttgcaattggagatcgc
gaaaatatgaaaaaagcattccagaaattgatctctgttgatcttggtattggtgaagag
gacaaatacattccagccaatgatgatccacatacaaatttagtaattgaagctattaag
aatgaccagcttcggcaaatggaacgagagaaacaatctttggcagaaaaattcattatg
acctcggctaagttaattgcaccagcaatagaaacatcctttgctgcaggattcgactgg
tgtgttgatatggtaaaaacctctcagtatacagaactggcgaatgacttggaaattaac
aaagctattacttacctgagacagagagatttcagcaaggctgtggaaacactgaaaatg
tttgagaaaaaggacagccgagtaaaaagtgctgctgcaaccaacctttcctttttatat
tttctggaaaacgattatggacaagctgaccgatatgcagatcttgccatagttgctgac
agatataattctgctgctcttgttaacaaaggaaatattgtttttgtaaatcaagactat
gaaaaagcggcagagttttataaagatgcactgcgaaatgattcttcatgcacagaagca
ctttataacttaggtctgacttacaagaagctgagtagacttggagaagcacttgactgt
tacttaaaactccacacaatccttcgaaacagtgcccaggttatgttccagttagccacc
ctatatgagattttagatgatccaaaccaatcaattgactggctgaaacagctgctaagt
gtatcacccacagatcctcaggcgctagctaagctgggagagctatatgacaatgaaggg
gacaaatcacaggctattcaatactattatgagtcattcaggtattttccctcaaatatt
gaagttattgagtggcttggagcttattacattgacacacaggtctgtgaaaaagcaata
ccatactttgaaagagcaatgctgattcagcctactcaagcaaagtggcaactaatgatg
gccagttgttacagaagaagtggtaattaccagaaagcactggagacatacaaagatatc
cacagaagatttcctgagaacattgaatgtttaagatttttggttcggctttgcactgat
atgggcttgaaggaagttcaggaatatgcaactaaactaaagaaagttgaaaaattaaag
gagattagagagcagcgtgtaaaatctgggcgagatggcagtgctcgcggtcgcagggag
ggaagtgcaagcagtgttatctctcctgaaagtaggctcagtccttcattggaccaagtt
aaagacagtggacagagcagccaaggtacaagtgccaagggagagcgacttagtgccaaa
ctgaaggcactgcctggagcaaatgaaccatatgaggccagcagtaacaaagaaatagat
gcatcctatgttgatcggctagggcctcaaattgatagaccaaaaactgctccacagaaa
cgaaaggaggatgatgactttgctgatgaagagctaggggatgatttgcttcctgaataa
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