Polypterus senegalus (gray bichir): 120523071
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Entry
120523071 CDS
T08668
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120523071 (trappc10)
Membrane trafficking [BR:
psex04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120523071 (trappc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_14
TPR_12
TPR_2
TPR_7
DUF5001
Mad3_BUB1_I_2
Motif
Other DBs
NCBI-GeneID:
120523071
NCBI-ProteinID:
XP_039599964
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Position
2:complement(77964775..78073627)
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AA seq
1260 aa
AA seq
DB search
MESPEEKPIIYTMENKPIATCAGDQNVFTALYQTLARELPREPMEWRRSYGRPPKMIHLE
ANFVQFKEELLPNEGNKALLTFPFLHIYWTDCCDTEVYKSSVKDDITRWQNILKNYNTVD
WLIVLVDSDAKKKNKTNILPRTSIVDKIRSDFCNKQSDRCVVLSDPLKESSRSQESWNAF
LNKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQYEDA
LVQYDELDALFTQYVVNFGAGDGAKWLKSFCQPVRSWNGLILRKPIDMEKRDLIQKNAAS
LLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVPLGALDCWVFLSC
LEVLQRIEGCCDKAQLESNSSHTVGLWTYATEKLKSLGYLCGLASENGPNSEDLNRTVDL
LAGLGEERPETASSLQSPYKILKEALSSVESFEKHYLQQSCAAMEMYKTIGRLRSARLIG
KSLAEFYMRKGDPQKAETFLQDALKTYLAEGWALPVTHTRKQLAECQKQLGQTENYLQTS
SLLASDVNLTEEERKHFCQEILNFANHQDDNQVQKIILGMSTFAQLKELHFEPSSAFVHV
GGILNIELSLFSHMPVAVLLENIVASVHFSIEKSNFRKATEWQGKQRTVSLGSNGIIHFQ
SDPPIGSPCQSNMPSLELYEMYDKSPSDNSLNSTGVICKNVHLLLRRQESVSSIEMPSAI
SVEDGAQSLRANNTLLQPGLNKIVFSTQAKEPGLYTLRQLVATVGRVQFVLPHIYPIVQY
EIYSQEPNLKVEPLNDNLLAGIAQRVKFTLFTGHYTIRNGDALQLSNADSLIILCSAKYV
ATILANTGEKIKDSTLMVQSSEKVTSITLPLASAYHIVEFEVEVMCHIPSSIPKSENERL
TNGELYRKTKERHNLELCMMSLDQKISIDCPWSIYSTIIALTFYIPFKVKHSLLSAGKRK
YIQVCLQNMSDVSFNLSDPQLKEIMKYPNVNLISMNQENQQQIFSKQNVFYLWELKWSKE
LPSCLQCQLSVMFSPSSDEDEPNSLKPYTYDFIMENIYTLYTIKAEIYPSLGSEHCRTGC
LCSLEVSIMRIAELLETDRDEALTESDGLCTTKLMYEVVDNSSNWAVCGKSSGVISMPVA
ARAIHKVHMEVMPLFAGNLPFPTVRIFKYLPHHSIHMAQPDTDSLIENDTLSIDKSLDEQ
ADSSSIRSRTSTHSASSEHKGLPMPRLQPFSIGQVFNSSAGMQVLVVPSKDDHVLEVNVT
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctgaagaaaagccaataatctacactatggagaacaaaccgattgcaaca
tgtgctggggatcaaaatgtgtttactgccctttaccaaacacttgcacgggagcttcca
cgggagccgatggagtggaggaggtcttatggtcgcccaccaaagatgattcatttggag
gccaactttgtccaatttaaagaagaactgttgcctaatgaaggcaataaggctcttttg
acttttccatttctacatatatactggacagattgctgtgatacagaggtttacaagtct
tctgttaaagatgacattaccagatggcagaacattttgaagaattacaatacagtggac
tggctgattgtgttagttgacagtgatgccaaaaagaagaacaaaaccaacattcttcca
cgaacatcaatagtagataaaataaggagtgacttttgcaataaacagagtgacagatgt
gtagtgctgtcagatcctttaaaagaatcctcccgctctcaggaatcttggaatgcattc
ttaaataaactcaggacattgcttctcatgtcctttacaaaaaaccttggcaaatttgaa
gatgacatgagaactttaagggaaaaacgaacagaacctggttggagcttctgtgagtac
ttcatggttcaggaggaacttgcatttgtttttgaaatgttgcaacagtacgaagatgcc
ctggtgcagtatgatgaactggatgccctgtttacacaatatgttgttaattttggtgct
ggagatggagcaaagtggctaaaatccttttgccagccagtgcgaagctggaatgggtta
attctaaggaaacctattgatatggagaagcgtgacctaatacaaaagaatgctgcatct
cttcttgatttgcgcagttatctgttttctcgtcaatgtacgctgcttattttcttacag
cgtccttgggaagtcacacagcgtgcccttgaacttctccataattgtgttcaggaactc
cgtcttcttgaggtgtcagtgcctttgggtgctcttgattgttgggtcttcttaagctgt
ttagaagtgttacagagaatagaaggctgttgtgacaaagcacaactagaatctaattca
tcacatactgttggtctttggacttatgcaactgaaaaattaaaatcccttggatacctc
tgtggtctagcatctgaaaatgggcccaattctgaggacttgaatagaactgtggatctc
ttagcaggactaggagaagagagaccagaaacagctagtagcctccaaagtccatacaaa
atacttaaagaagcattatcttcagtagagtcttttgaaaaacattacttgcaacagtcc
tgtgctgctatggaaatgtataagacaattggacgacttagatcagctcgactgattggc
aaaagccttgctgagttttacatgagaaagggtgatcctcagaaagcagaaacctttctt
caagatgctcttaaaacttatctagcagagggctgggctctgcctgtcactcacaccaga
aagcagttagctgaatgccaaaaacaacttggccaaactgaaaattaccttcagacaagc
agtcttttagcaagtgatgttaatctcactgaggaggaaagaaagcacttttgccaggag
atcctgaactttgctaatcatcaagatgataatcaagttcaaaagattattttagggatg
agcacatttgcccaactgaaggaactacactttgagccttcatcggcttttgttcatgtt
ggcggtatcttgaatattgaactgagtctgtttagccatatgccagttgctgtgcttctg
gaaaatattgtagcaagtgtgcactttagcattgagaagagcaacttcaggaaggctaca
gaatggcaaggcaaacagagaacagtgtctcttggtagcaatggaattatacactttcaa
agtgatcctcctataggcagtccatgccagagtaacatgccttcattggagttgtatgaa
atgtacgacaagagcccatctgacaactcactgaactcaacgggtgtcatctgcaaaaat
gtacatttgttgcttcgacgacaagaaagtgtctcatccatagagatgccatctgcaatt
tctgtggaagatggagcacagtcactaagagcgaataatactttattacaacctggacta
aacaagattgtttttagtacacaggcaaaagagccaggattatatactttgcgccagctt
gttgcaactgtgggcagagtgcaatttgttcttcctcacatatatcccattgtgcagtat
gagatctattctcaggaacctaatctgaaagtagaacccttaaatgataatcttttggca
gggattgcacaaagggtgaaatttacattattcacaggccattatactatcagaaatgga
gatgcactacagcttagtaatgctgattctttaatcattctctgttctgccaagtatgtt
gccacaattcttgccaacacaggagaaaagattaaggacagcacattgatggttcagtcc
tcagagaaagtgacaagcataactttaccactagcttcggcttatcatattgttgagttt
gaggtggaggtgatgtgccacattccttcctctattccaaaatctgagaatgagagactg
actaatggggagctataccggaaaacgaaagagagacataacctggagctatgtatgatg
tctcttgatcaaaagatatctattgattgtccatggtctatttattctacgatcattgcc
ttgactttttatattcccttcaaagtgaagcattctttattgtctgctggaaaaagaaaa
tatattcaagtgtgccttcagaatatgtctgatgtgagctttaatttgtcagacccacag
ttaaaggagatcatgaagtacccaaatgtgaatctaatatctatgaatcaggaaaatcag
cagcaaattttcagtaaacagaatgtattctatctctgggagctgaagtggagcaaggaa
cttccttcctgtttgcagtgccagctatcagtcatgttctctccttcttcagatgaagat
gagccaaactcactgaagccatacacatatgattttataatggagaatatatatacacta
tacactattaaagcagaaatctatccatctcttggctctgaacattgtaggactgggtgt
ctctgctctcttgaggtctcaattatgcgaatcgctgagcttttagaaactgatcgcgat
gaagctctaactgaatcagatggtttgtgtacaacaaaactaatgtatgaagtggttgac
aacagcagtaattgggcagtttgtgggaagagttcaggtgtgatttccatgccagtggct
gcccgagctattcataaggtccatatggaggtgatgcccctttttgctggaaatttacct
ttccccactgtaaggattttcaaatatttgcctcaccattcaattcacatggctcagcca
gatactgacagtttgattgaaaatgatactctatctattgacaagtctctagatgagcag
gcagacagcagtagtattcgtagcaggacaagtacccactcagccagcagtgaacacaaa
ggactacctatgccccgtttgcaacccttcagtattggacaagtcttcaacagtagtgct
ggtatgcaggtccttgttgtgcccagcaaggatgatcatgttctggaagttaatgtgaca
tga
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