Polypterus senegalus (gray bichir): 120523079
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Entry
120523079 CDS
T08668
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120523079 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120523079 (u2af1)
Spliceosome [BR:
psex03041
]
Complex A
U2 snRNP components
U2 related factors
120523079 (u2af1)
Complex B
120523079 (u2af1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
120523079
NCBI-ProteinID:
XP_039599977
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All DBs
Position
2:complement(78431140..78483567)
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AA seq
247 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRHRSRSRSRERRSRSRDRGGRGGGGGGGGGGGGGGGGGGRDRERRRSRD
RERSGRF
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatttggcgtccattttcgggacagaaaaggacaaggtcaactgttcattc
tacttcaaaattggagcttgccgccatggagatagatgttccagattgcataataaacca
acattcagtcagaccattgccctcttgaacatttaccgtaaccctcaaaacactgcccag
tctgctgatggtttacgctgtgctgttagtgatgtggagatgcaagaacattatgatgag
ttttttgaggaggtattcacagaaatggaagagaagtatggtgaagttgaagagatgaat
gtttgtgataatcttggtgatcacttggttggaaacgtatatgtgaagtttcgaagggaa
gaagatgctgaaaaggctgtaatggatttaaacaatcgttggttcaatgggcaaccgatt
catgcagaactgtcaccagtgacagatttcagggaagcttgctgtcgccagtatgaaatg
ggagaatgtaccagaggaggcttctgtaattttatgcatctgaagccaatttccagagaa
cttcgtagagaactttatggacgccgtagaaaaaggcatcgatctcgttcacgatcacgt
gagcggcgctcaagatcaagagatcgtggtggaagaggaggaggaggaggaggaggtggc
ggcggtggtggtggtggtggtggtggtggaagggatcgtgaaaggcggagatccagggat
agagaacgatctggccgattctaa
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