Polypterus senegalus (gray bichir): 120523120
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Entry
120523120 CDS
T08668
Symbol
boc
Name
(RefSeq) brother of CDO isoform X1
KO
K20020
brother of CDO
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120523120 (boc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120523120 (boc)
Cell adhesion molecules [BR:
psex04515
]
Immunoglobulin superfamily
Other
120523120 (boc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Ig_4
Y_Y_Y
Fn3_VIN3
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
120523120
NCBI-ProteinID:
XP_039600042
LinkDB
All DBs
Position
2:complement(86270859..86344395)
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AA seq
1059 aa
AA seq
DB search
MGVPRSFFLFAAVAALVSSADDMPSFTVQPASVVQKLGELVTLTCSVEPSIATVSWQYNG
QSLPVNTSDLGVLVQRDTLIIPSLSNLNVGRYQCVARTASGACASIPASVTVAKLRDFEV
DGQHEIEVDEGNTAVIECHLPESQPKAQVRYSVKQEWLESSTGNYLIMPSGNLQIVNATQ
EDEGTYKCAAYNPVTQEVKTSISTDRLRIRRSMAEAARIIYPPRAQTIIVTRGQSLALEC
VASGIPPPQVTWAKDGATLGLQNKTRFLLSNLLIDAISESDSGTYSCQADNGIGEPGAAF
IYYSVQVLEPPEVVLELQQQFIPWGQSALFNCDVRGNPQPSVVWLHNASPLTMSQRHHIT
KQTLHILDIGPQDDGIYQCMAENDVGSSQGAARLITVPSEFPFKGATDSPTDVFSPVDSL
RPLGPERSPLRPWPSVPSAPVSCSKGTGPVQLAEAPVILSSPRTAKADSYELMWRPRHDG
GPPVLEYIIKHKKAGDPSDDWTVASIPGHLYRLTLVKLEPSSLYEVEMAARNCAGLGQAA
MMTFRTGKGRNQNQKSQGIGASGPDIILNDDAGSSSQTHSQLDNARLSPPEAPDRPTISM
ASETSVYVTWIPRGNRGFPIQSFRVEYKKLKKGGDWVLATSSIPPSRLSVEIPGLEKGTS
YKFRVRAVNILGESPPSAASKPYIVSGYIHRVYERPVTGPYITYTEAINETTIMLKWMYI
PASNNNTPIHGFYIYYRPTDSDNDSDYKKDVVERDRYWHSITRLQPETSYDIKMQCFNEG
GESEFSNVMICETKARRHPRPPVDSTPPQSTPGSGEVSTIARASDLPYLIVGVVLGAIVF
MIVAFIPFCLWRFWAKQKHTSDLGFTPTAPSRSSCQYTMVPLRSVPLPNGHCPVGGTVIS
LNGGCHPHSTPGKPLEYCVDQLCQGDVSCTSLLSETVNHSRHVGYDSSERSPSQELQEGS
FLPDNSTYQLLQTQENLRQPENTCHLTGSGQLQGRACVNCRTDTDKAGSLGWLLAAPVEN
VERPEMHLPVSSTVSCSAGDLRPAADVYRGLQSQDLPQS
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgccgaggagctttttcctttttgcagctgtggctgctctagtatcctcagca
gatgacatgccatcgttcacagtacagcctgcctctgtggttcagaagttaggcgagttg
gtcaccctgacgtgcagcgtggagccttcaattgctactgtgagctggcaatataacgga
cagtccttgcctgttaatacatctgatctgggagttctagttcaaagggatacccttatt
attccttctctcagtaacctcaacgttgggcgctaccaatgtgtggcacggacagcctcc
ggagcatgtgcgagcatcccggcttctgtgactgtggcaaagttgagagattttgaggtg
gatggtcaacatgagattgaggtcgatgaaggtaacacagcagtcatagaatgtcacctc
cccgagagtcagccaaaggctcaggtgcggtacagcgttaaacaagagtggctagaaagc
tctacagggaattacttgatcatgccttcaggaaatctacaaattgtgaatgcaacacag
gaggatgagggcacttacaaatgtgcagcctataaccctgtaactcaggaggtgaaaaca
tccatttccactgaccggctacgcatccgacgctccatggcagaagcggccagaataatc
tacccacctagggctcagactatcattgtgacaagaggacaaagcctagcattagagtgt
gtagccagtggtataccgcctccacaggtgacttgggctaaggatggtgctaccctgggc
ttgcagaacaagacccgcttccttctcagtaacctactgattgatgctatcagtgaatct
gattctgggacctatagctgtcaggcagacaatggcataggagagccaggtgcagccttc
atctactacagtgtacaagtgcttgagccccctgaagtggtcctagagctccagcagcag
tttataccctggggacaaagtgccctcttcaactgtgatgttcggggtaaccctcagcct
tcagtggtctggctacacaatgcatctcccttgactatgtcccagcgacaccatataact
aagcagacactgcacatcctggatattggtcctcaagatgatggcatctaccagtgtatg
gcagagaatgatgtgggcagctcacagggggctgctcgactaatcactgtgccatctgaa
ttcccttttaaaggagcaactgattctcccactgatgttttttctccagtggatagttta
cgacctcttggtcctgaaaggtcaccactcagaccctggccctcagtacccagtgctcct
gtcagttgctccaaaggtactggaccagtgcagctagcggaggccccggttatccttagc
tctcctcgtactgcaaaagctgactcttatgagctgatgtggcgaccaaggcatgatggt
ggaccacctgtgcttgaatatatcatcaaacataagaaggctggagatccctcagatgac
tggactgtggcatccataccgggtcacctataccgcctcaccctggttaagctagagcct
tccagtctgtacgaagtagaaatggctgccagaaactgtgctggcctagggcaggcagct
atgatgaccttcagaacaggaaaaggccgcaaccaaaaccagaagtctcaagggattggt
gccagtgggccagacatcatcctgaatgatgacgcaggcagcagcagccagacccatagc
caactggataatgccagactctcccctcctgaagctcctgatcgaccaactatctccatg
gcatccgaaacgtctgtttatgtaacctggattcctcgaggaaatcgtggatttccgatc
cagtcctttagagttgaatataagaagctgaaaaagggaggtgattgggttttggcaacc
agcagtatcccaccatcccgactttctgtggagatccctggcctcgagaagggaacctcc
tataagtttagagtacgagcagtcaatattttgggagagagcccacccagtgctgcctct
aagccctacattgtgtctggctacattcaccgtgtatatgagcgtccagttactgggccc
tatatcacctatacagaagcaatcaatgagaccaccattatgctgaaatggatgtatatt
ccagccagcaacaacaataccccaatccatggcttctacatctactatcgccctactgac
agtgacaatgacagtgattacaagaaagacgtggtggaacgtgaccgatactggcactcc
ataacccgattacaaccagagacttcatatgacataaaaatgcagtgcttcaatgaaggg
ggcgagagcgaattcagtaatgttatgatttgtgagactaaagctcgacgacatcctcgg
cctccagttgactctacacctcctcaatccactcctggctcaggggaggtgtcaacaatt
gcccgtgctagtgacctgccctacctcattgttggcgtggtgctgggcgccattgttttt
atgattgtggctttcattcccttctgtctatggcgtttctgggctaaacagaaacacaca
tcagacttgggctttactccgacagccccatcgaggtcctcttgtcagtataccatggtt
ccactacggagtgtgcctttgcccaatggccactgccctgttggtggaacagtaatctcg
ctgaatggtggctgtcaccctcacagtactcctgggaaaccgttagagtattgtgtggat
cagttgtgccagggtgatgtgagctgcacttctctgctttcagagaccgtgaaccactcc
agacatgttgggtacgactcctcagaaaggtcgccaagtcaagagcttcaagaaggctca
tttctacctgacaactctacctatcagcttcttcaaacccaggagaatctgaggcagcca
gagaatacgtgtcacttgactggaagtgggcagctgcaaggcagagcctgcgtaaactgt
aggactgacacagacaaagcaggttcactgggatggctgctggcggctccagtggagaac
gtcgagaggccagaaatgcatttgcccgttagcagcacagtgtcctgcagtgctggcgac
ctgcggcccgctgctgacgtctacagggggcttcagagccaggatcttccacagagttag
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