Polypterus senegalus (gray bichir): 120523300
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Entry
120523300 CDS
T08668
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04620
Toll-like receptor signaling pathway
psex04621
NOD-like receptor signaling pathway
psex04622
RIG-I-like receptor signaling pathway
psex04623
Cytosolic DNA-sensing pathway
psex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120523300 (irf7)
04621 NOD-like receptor signaling pathway
120523300 (irf7)
04622 RIG-I-like receptor signaling pathway
120523300 (irf7)
04623 Cytosolic DNA-sensing pathway
120523300 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120523300 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120523300 (irf7)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120523300 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Forkhead
Motif
Other DBs
NCBI-GeneID:
120523300
NCBI-ProteinID:
XP_039600445
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Position
1:complement(18877352..18908762)
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AA seq
432 aa
AA seq
DB search
MQSNRTRPQFSNWLIEQINSNGYPGLCWVNKDTFRIPWKHNSRMDCSEEDCAIFKAWAVT
SGKIHEYPESKAKWKTNFRCILHSLKCFRKINDHSKDSDDPHKVYQIVEEINVENAQLPQ
SDIHAHLPLPMNFQMIPPAMNQPVNTEQETFQQFGMLNLSNTQAELPIGVSSQNVSPILF
NEQFAESTPANPVYVPQNEMPQEPATWQYAMGPLPHEHEMEVTITYRGRTVLQTIVCGPK
VQLYYNCEENVIVAQSRVCFPRTDGMTDRKQIQSTNTLLDNIQRGLLLEIRNRSIYATRL
SKCCIYMSDPSAPPNTIGGSFKLSQNEEVQLLDFSKYFLEIKKYCDNEGNSPDYTIYLCF
GEKYPDNKPNERKLIIVKIVPLMYKHLYEVAQLSGASSLRSNPSLQISCDSENDLYSLIQ
SYLNSGMDFTNY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtaaccgaacaagaccccagttcagcaactggctgattgaacagattaacagt
aacgggtaccctggtctttgctgggtgaacaaagacacatttcgcattccttggaaacac
aactccaggatggactgcagtgaagaggactgtgccatcttcaaggcatgggcagtgacc
agtggcaagatacatgaatacccggagagtaaggcaaagtggaagaccaatttccgctgt
atcttgcacagcctcaaatgttttcgcaagattaatgatcattctaaggattccgatgac
cctcacaaagtataccagatagtggaggaaattaatgtggaaaatgcacagcttcctcag
agcgatatccatgctcacttacctctgcccatgaattttcaaatgattcctccagcgatg
aatcagccagtaaatacagagcaagaaacattccaacagtttgggatgctgaatctgagc
aacactcaagcagagctacccattggagtttcctcacaaaacgtgtccccaattttattt
aatgagcaatttgccgagtccacgccagccaatcctgtctatgttcctcagaatgagatg
ccacaagaaccagctacttggcagtacgccatgggtcctttacctcacgagcacgagatg
gaagtcaccatcacatacagaggtagaaccgtgctgcagacgatagtgtgtggtcctaaa
gttcagctctactacaactgcgaggaaaacgtgattgtagcccagagtcgcgtctgcttc
cccagaactgatgggatgacggatcggaagcagattcaaagcaccaacacgctccttgat
aacatccagagaggactccttttggaaattagaaatcggagcatctatgcaacacgactg
agcaaatgctgcatttacatgtctgacccaagtgctccaccaaacacaatcggaggatca
tttaaactttctcaaaatgaagaagtgcagcttctggacttcagtaaatacttcctagaa
attaagaaatactgtgacaatgaaggcaactctccagattataccatatacctgtgcttt
ggagagaaatatccagataacaagccaaatgagaggaaacttattattgttaagattgta
cctctcatgtataaacacctttatgaagtggcccagctgagcggagcatcgtctttaaga
agtaaccccagtttacagatatcgtgtgactctgagaatgacttgtatagtttaattcaa
tcttatttaaatagtggaatggactttacaaattattga
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