KEGG   Polypterus senegalus (gray bichir): 120523300
Entry
120523300         CDS       T08668                                 
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04620  Toll-like receptor signaling pathway
psex04621  NOD-like receptor signaling pathway
psex04622  RIG-I-like receptor signaling pathway
psex04623  Cytosolic DNA-sensing pathway
psex05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:psex00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    120523300 (irf7)
   04621 NOD-like receptor signaling pathway
    120523300 (irf7)
   04622 RIG-I-like receptor signaling pathway
    120523300 (irf7)
   04623 Cytosolic DNA-sensing pathway
    120523300 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120523300 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psex03000]
    120523300 (irf7)
Transcription factors [BR:psex03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    120523300 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF Forkhead
Other DBs
NCBI-GeneID: 120523300
NCBI-ProteinID: XP_039600445
LinkDB
Position
1:complement(18877352..18908762)
AA seq 432 aa
MQSNRTRPQFSNWLIEQINSNGYPGLCWVNKDTFRIPWKHNSRMDCSEEDCAIFKAWAVT
SGKIHEYPESKAKWKTNFRCILHSLKCFRKINDHSKDSDDPHKVYQIVEEINVENAQLPQ
SDIHAHLPLPMNFQMIPPAMNQPVNTEQETFQQFGMLNLSNTQAELPIGVSSQNVSPILF
NEQFAESTPANPVYVPQNEMPQEPATWQYAMGPLPHEHEMEVTITYRGRTVLQTIVCGPK
VQLYYNCEENVIVAQSRVCFPRTDGMTDRKQIQSTNTLLDNIQRGLLLEIRNRSIYATRL
SKCCIYMSDPSAPPNTIGGSFKLSQNEEVQLLDFSKYFLEIKKYCDNEGNSPDYTIYLCF
GEKYPDNKPNERKLIIVKIVPLMYKHLYEVAQLSGASSLRSNPSLQISCDSENDLYSLIQ
SYLNSGMDFTNY
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgcaaagtaaccgaacaagaccccagttcagcaactggctgattgaacagattaacagt
aacgggtaccctggtctttgctgggtgaacaaagacacatttcgcattccttggaaacac
aactccaggatggactgcagtgaagaggactgtgccatcttcaaggcatgggcagtgacc
agtggcaagatacatgaatacccggagagtaaggcaaagtggaagaccaatttccgctgt
atcttgcacagcctcaaatgttttcgcaagattaatgatcattctaaggattccgatgac
cctcacaaagtataccagatagtggaggaaattaatgtggaaaatgcacagcttcctcag
agcgatatccatgctcacttacctctgcccatgaattttcaaatgattcctccagcgatg
aatcagccagtaaatacagagcaagaaacattccaacagtttgggatgctgaatctgagc
aacactcaagcagagctacccattggagtttcctcacaaaacgtgtccccaattttattt
aatgagcaatttgccgagtccacgccagccaatcctgtctatgttcctcagaatgagatg
ccacaagaaccagctacttggcagtacgccatgggtcctttacctcacgagcacgagatg
gaagtcaccatcacatacagaggtagaaccgtgctgcagacgatagtgtgtggtcctaaa
gttcagctctactacaactgcgaggaaaacgtgattgtagcccagagtcgcgtctgcttc
cccagaactgatgggatgacggatcggaagcagattcaaagcaccaacacgctccttgat
aacatccagagaggactccttttggaaattagaaatcggagcatctatgcaacacgactg
agcaaatgctgcatttacatgtctgacccaagtgctccaccaaacacaatcggaggatca
tttaaactttctcaaaatgaagaagtgcagcttctggacttcagtaaatacttcctagaa
attaagaaatactgtgacaatgaaggcaactctccagattataccatatacctgtgcttt
ggagagaaatatccagataacaagccaaatgagaggaaacttattattgttaagattgta
cctctcatgtataaacacctttatgaagtggcccagctgagcggagcatcgtctttaaga
agtaaccccagtttacagatatcgtgtgactctgagaatgacttgtatagtttaattcaa
tcttatttaaatagtggaatggactttacaaattattga

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