Polypterus senegalus (gray bichir): 120523378
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Entry
120523378 CDS
T08668
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03272
Virion - Hepatitis viruses
psex03273
Virion - Lassa virus and SFTS virus
psex04140
Autophagy - animal
psex04142
Lysosome
psex04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120523378 (lamp1a)
03272 Virion - Hepatitis viruses
120523378 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120523378 (lamp1a)
04142 Lysosome
120523378 (lamp1a)
04140 Autophagy - animal
120523378 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120523378 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120523378 (lamp1a)
04090 CD molecules [BR:
psex04090
]
120523378 (lamp1a)
Membrane trafficking [BR:
psex04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120523378 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
120523378 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
120523378 (lamp1a)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
120523378 (lamp1a)
CD molecules [BR:
psex04090
]
Proteins
120523378 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
TssD
Motif
Other DBs
NCBI-GeneID:
120523378
NCBI-ProteinID:
XP_039600579
LinkDB
All DBs
Position
2:133352395..133425075
Genome browser
AA seq
426 aa
AA seq
DB search
MCCGCIPGSDNMAFLSSKQLLLIGMTLGLLNTVCAVSFEVKDEKNTTCIKAELSANFSVQ
FEQNDKNMSIAVIVLPEDAKVGNLSTCGNTTTGPLLVIVFGAGHELGINFSSSSSTYMVK
TLVVTFNLSDSTVFPNSSSKGQVSDSTNSVDIQAPLNTTYHCVSVQHVMLKNVNISFSNM
RLEAYLHSSNFSKDESVCSADLPSTPAPKTTPATTPSPTTAPLPNPTPKTYNVTNVNGTC
LLAKMGLQLNITITPPSENKTESLLVNIQPNKTIATGSCGSQNASLVLSDGSVTNLTFVF
MLNNTLKKFFLSGITVDTILNAAEKKFHAENNSLSYLRASFGKSYTCKAEQTLLVSPDFS
VNAFDLQIQPFGVHEGQFSAVEECQMDEDNMLIPIIVGAALAGLVLIVLIAYLIGRKRSH
AGYQTI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgtggctgcattcctggctccgacaacatggccttcctctccagtaaacaactc
ctcttgattggaatgacactgggacttctaaacactgtctgtgctgtatcattcgaagtg
aaggatgagaagaacacaacatgcataaaagctgagctttcagcaaatttttctgtccag
tttgaacagaatgacaaaaatatgagcattgcagtgatagttctcccagaagatgcaaaa
gtaggtaatctgagcacttgtggtaatacaactacaggcccactcttggtcattgtcttt
ggagctggccatgaactcggcataaacttctcttcaagttcttcaacgtacatggtgaaa
acgttggtggttaccttcaatctttctgacagtactgtatttccaaactcaagttctaaa
ggccaagtgagtgactccacaaactcagttgatatccaggctccactgaataccacttac
cactgtgtgagtgttcagcatgtaatgttgaagaatgtcaatatctcgttcagtaatatg
agactggaagcctatctgcacagttcaaacttcagcaaagatgaaagtgtatgctctgct
gatcttccatctactcctgcaccaaaaactactccggcaactactccttcaccaacaacc
gcacctttgccaaacccaaccccaaaaacgtataatgtcacaaatgtcaatgggacttgc
cttctggccaaaatgggacttcaacttaatattaccattactccaccatcggaaaacaag
actgaatcccttcttgtgaacattcaacccaacaaaactatagcaactggatcctgtggc
agtcaaaatgcatctcttgttttaagtgacggcagtgtaacaaatttaacattcgtgttt
atgctgaataacactttaaagaagttcttcttgagtggaatcaccgttgacacaatctta
aatgcagctgaaaaaaagtttcatgccgagaacaacagtctgagctatctgcgagcatct
tttggaaagtcctacacatgcaaagctgagcaaactctgttagtctcacctgatttttcg
gtcaatgcctttgacctccagattcagccttttggagttcatgaaggccagtttagtgca
gtggaggaatgtcagatggatgaagacaacatgctcatcccaatcatagtgggtgctgca
ctggctggattagttttgatagtgctgattgcctaccttataggcaggaagagaagtcat
gctggctatcaaaccatttaa
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