Polypterus senegalus (gray bichir): 120523386
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Entry
120523386 CDS
T08668
Symbol
tfdp1b
Name
(RefSeq) transcription factor Dp-1b isoform X1
KO
K04683
transcription factor Dp-1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03083
Polycomb repressive complex
psex04110
Cell cycle
psex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120523386 (tfdp1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120523386 (tfdp1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120523386 (tfdp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120523386 (tfdp1b)
03036 Chromosome and associated proteins [BR:
psex03036
]
120523386 (tfdp1b)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
120523386 (tfdp1b)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120523386 (tfdp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
120523386
NCBI-ProteinID:
XP_039600591
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All DBs
Position
2:133949177..134045441
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AA seq
442 aa
AA seq
DB search
MFALLRNAGCSPEHPAKFDFDTTLSHCCQAGSGNMAKDAGLIEANGELKVFIDQNLSPAK
GVVSLVAVHPSVSLGKQLLPKTLGPSNVNISPHMVIGTPQRPSGTNTVLVGSPHTPNAQF
ISQSHVADSSPWSTGKRSKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFST
TDNHISPNDAHVYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEV
ERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRQVEQQNNRPPPSNSVIHLPFIIVNTS
KKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMACGLESGKCSPEDLKIARSLVP
KSLEPYVTEMAQGSINNVYIYGGASSNGGRYNTGSDNGADGTLASSSNGSHYSGSRVETP
VSYMEEDDDDDDDDYDENDDED
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccctgttaagaaatgcagggtgctcaccagaacatcctgcaaagtttgacttt
gataccacgctgtcacattgctgtcaagcaggatctggtaacatggcaaaagatgctggc
cttatagaagcaaatggagaactgaaggtttttatagaccaaaatcttagccctgctaaa
ggtgtggtgtctttagtggctgttcatccatctgtatcgctaggaaaacaacttctgccc
aaaacacttggaccttcaaatgtaaacatttcaccacacatggttattggcacccctcaa
agaccttcagggacaaataccgtgcttgttggaagtccacacacaccaaatgcacaattt
atctctcagagccatgtggcagattcttctccttggtccacagggaaaaggagtaaaaaa
ggggagaagaatggaaaagggctgaggcatttttccatgaaggtgtgtgaaaaggttcag
aggaaaggaaccacatcttacaatgaagttgcagatgaactggttgcagagttcagtact
acagacaaccacatttcccctaatgatgcacatgtatatgatcagaaaaacataagacgt
agagtctatgatgccttaaatgtgctcatggccatgaacattatttcaaaagagaagaaa
gaaattaaatggattggacttcctaccaactcagctcaggaatgtcaaaatttagaggtg
gagaggcagagaaggctagagagaataaaacagaagcaatcacagctacaggaattaatt
ttacagcaaattgcctttaaaaatcttgtacagagaaatcgacaagtagaacaacagaat
aatcgtcctccaccttcaaattctgtgattcatttgccctttattatagtgaataccagc
aagaagacagtcattgactgcagcatctcaaatgacaaattcgagtatttatttaatttt
gacaacacatttgaaattcacgatgacattgaggttttgaaacgaatggggatggcttgt
ggtttagagtctggaaagtgttctcctgaagacctgaaaattgcaagaagtttagtgcct
aaatcattggaaccatatgtaacagaaatggctcagggatcaatcaataatgtatatatc
tatggtggagcatcttcaaatggtggacgctataatactggcagcgacaacggcgcagat
ggtactttggcatccagttcaaatggatcacattatagtggatctagagttgagacacca
gtttcttacatggaggaggatgacgacgatgacgatgatgattatgatgagaatgatgat
gaagattaa
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