Polypterus senegalus (gray bichir): 120523420
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Entry
120523420 CDS
T08668
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04810
Regulation of actin cytoskeleton
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120523420 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120523420 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120523420 (cyfip1)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120523420 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
120523420 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
120523420
NCBI-ProteinID:
XP_039600648
LinkDB
All DBs
Position
2:complement(141196702..141328594)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTTVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIPGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLTKIDKCFK
QLQVVPLFGDMQIELSRYIKNSAHFEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDSEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQQTLRDPLRQAIKKKKNVIQSVLQAIRKTICDWETGREPLNDPALKGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILEIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRAECKNMGAAFPSPSSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYRSL
ELAINRFESEDLTSIMELDGLLEINRMTHKLLSKFLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEIQRDKPPNAQPQYLYGSKALNLAYST
ICSFYRNFVGPPHFKAICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAMLFCLLIEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLEAKMKRLESKYTPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILARVRNFLDDHIWKGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIITLLGQHRRFDVLDFCYHLLKVQKHDGKDEVIKSVP
LKKMVDRIRKFQVLNDEIFAILGKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacagtgactctagaggatgccctttcaaatgtggaccttcttgaagagctg
cctttgccagatcagcagccttgtattgagccacctccttcttctttactgtaccagcca
aactttaacactaactttgaagacagaaatgcatttgtcactggcattgcaagatatatt
gaacaagcaactgtccactccagtatgaatgaaatgcttgaggagggccaggagtatgcc
attatgctgtacacatggagaagctgttcaagagccattcctcaggtaaaatgcaatgaa
cagcctaaccgagtggagatatatgaaaagactgttgaagtacttgaacctgaggtcaca
aagcttatgaacttcatgtatttccagcgcaatgccattgagcgtttctgtggagaagta
agaaggctgtgtcatgctgaaagaagaaaggactttgtttcagaggcctatcttcttacc
ctgggcaagttcatcaacatgtttgccgtgctagatgaactgaaaaatatgaagtgtagt
gtgaaaaatgatcactcagcatataaaagggctgcacagtttttacggaagatggcagat
ccccagtcaattcaagagtcgcagaatttatctatgttccttgctaaccacaataaaatt
acccagtcattacagcagcagttggaagtcattccaggatatgaggaacttcttgcagat
atagtgaacctttgtgttgattactacgagaataaaatgtacctcacccccagtgagaaa
cacatgttattaaaagtgatgggctttggtttatacctgatggatgggtcagtcagcaac
atttacaaactcgatgcgaagaaacgaataaacttaactaagattgataaatgtttcaag
caactccaagttgtccccctgtttggtgatatgcaaattgagctgtccaggtatatcaaa
aacagtgctcattttgaagaaaacaagtccagatggacatgcacttcttctggaagtagt
cctcagtataatatttgtgagcagatgatccaaatacgagaagatcatatgcgtttcatt
tcagaactagcacgttatagcaacagtgaggtagtgacaggctctggtcgtcaagaagca
cagaaaactgactctgaataccggaaactgtttgatttggctcttcaaggtcttcagctg
ctctcgcagtggagcgctcatgtaatggaagtgtactcctggaaactggttcatccaaca
gacaagtattcaaacaaagactgtccagataatgctgaggagtatgaaagggctaccaga
tacaactatacaagtgaagaaaagtttgctcttgttgaggtgatggctatgatcaaggga
ctgcaagttctgatgggtaggatggaaagtgtttttaaccatgcaattcgacacacaatc
tatgcagctcttcaagactttgcccaacaaacattgcgggaccctttgaggcaagccatc
aagaagaaaaagaatgtcattcagagtgttttacaggcaattaggaaaactatatgtgac
tgggaaactggacgagaaccacttaatgacccagccttgaaaggagagaaagatcctaaa
ggtggctttgatatcaaagtaccaagaagagctgtaggaccatccagtacacagctgtat
atggtgcgaaccatgctagagtcgctcattgctgacaaaagtggctccaagaaaacactg
aggagtagcctggagggacctaccattttggaaattgagaaatttcatcgggaatccttt
ttctacacacatttgttaaatttcagtgaaactctgcagcaatgctgtgacctctcacaa
ctttggttcagagagtttttcctggaactgaccatgggtcgtaggattcaatttcctatt
gaaatgtccatgccttggatcctgactgatcacatcctggaaactaaggaggcttcaatg
atggagtatgttctctatccgctggacctttacaatgatagtgcacattatgcactgaca
aaattcaataagcagttcctatatgatgaaattgaggcagaggtgaatttatgttttgac
cagtttgtatataaacttgctgaccagatatttgcctactacaagattctggcaggcagt
cttcttttagacaaacgacttcgggcagagtgcaaaaatatgggagcagctttcccctct
ccatcctccaatcgatacgaaaccttgctgaagcaaaggcatgtccagcttcttggaaga
tctattgatttgaaccgactaattactcagcgggtgtctgctgcaatgtacaggtctcta
gaattagcaattaaccgttttgaaagtgaggatcttacatctatcatggaattagatgga
ttattggaaattaaccgaatgacgcataagctgctgagcaaattcctcaccttggacagt
tttgacgctatgttcagggaagcaaaccacaatgtttctgccccttatgggagaatcaca
ctccatgtattctgggagcttaactatgatttcctgcccaactactgttacaatggctca
acaaacagatttgttcgcactgtcctgcctttctctcaggagattcagagagacaagcca
ccaaatgcacagccacaatatttatatggatcaaaggcactgaatttggcatacagtact
atctgtagtttttatcggaactttgtgggacctcctcactttaaagctatctgcagactg
ctcggttatcaggggattgccgttgtaatggaagagcttctgaaagttgtcaagagtttg
ctccaaggaaccatcttacagtatgtgaagactttgatggaggttatgcccaaaatctgt
cgtttaccaagacatgaatatggttctccaggtattttggaatttttccaccaccagcta
aaagatattgtagaatatgctgagctgaagacagtgtgtttccagaaccttagggaagtg
ggaaatgccatgctcttctgtcttctgattgaacagagcttgtctcaagaagaggtatgt
gatctgcttcatgcagccccgtttcagaacattttgccaagagttcatgtgaaagagggg
gaacggcttgaagcaaagatgaaaagactggaaagcaaatacactcctcttcatctcgtg
cccttaatagaacgtctcggaactccacagcaaatcgcaattgcaagagaaggggacctg
ctgaccaaagagaggctgtgctgcgggctctcaatgtttgaagtgattctggctcgagtt
cgaaatttcctcgatgaccacatctggaaaggccccctgcccagtaacggggtcatgcat
gtggacgagtgtgttgagtttcacaggctgtggagtgctatgcagtttgtgtactgcatt
cccgttggagctcacgaattcacagtggaacagtgctttggggatgggctccactgggct
ggctgtatgatcatcaccctcctggggcagcacaggcgcttcgatgtcctggatttttgc
taccatctcctaaaagtgcagaagcatgatgggaaggatgaggtcattaagagtgtgcct
ttaaagaaaatggtagacagaatccgcaagtttcaagtgctgaatgatgagatctttgct
attcttggcaaatacctgaagtcgggcgatggagagaacatgccagtggaacacgtgcgc
tgcttccagccgccaatccaccagtccctggccagcaattag
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