Polypterus senegalus (gray bichir): 120523517
Help
Entry
120523517 CDS
T08668
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120523517 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120523517 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120523517 (usp16)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120523517 (usp16)
Peptidases and inhibitors [BR:
psex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120523517 (usp16)
Ubiquitin system [BR:
psex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120523517 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
120523517
NCBI-ProteinID:
XP_039600840
LinkDB
All DBs
Position
2:161613892..161823910
Genome browser
AA seq
810 aa
AA seq
DB search
MGKKRVKEKRSDKNQPSAISGSPCKHCHKSTDQNLLKKKLQDGQFLTCQDCEESVNKNTK
DVKECPESSGIWICLRCGHRGCGRDSENQHAVKHFEKLHSDPHCLVLSLDNWSVWCYICD
DYVQYSSTGHLGQLVTYFQKLYFSGPSKKNKTKCFKESENQIHKLENKKVEKENKNEQHK
DNQKNETVVESNITSSHESRTVPVKGFSNLGNTCFFNAVLQILSQTQLLRQLIKEIKDEE
TVKNMSFVSTQQDPIQIKLDRPGPLTLALWKFLAEIQETKKAIVTPKELFFQVCKKAARF
KGFQQQDSQELLRYLLDGMRSEEYKRIKAGISEALNDSEKKLSEEETRKLVTEYEKKAFT
QNFVDQVFSGEITSTIKCEECETISFVTEMFLDLSLSISCQAYKKKQPRKTEKRLSEFED
NDDSFALTIDMDDIPTSVTSKYQQKKLKKQAKKQAKNHRRQQKLKEKITPLCSANLNVQE
NQCNNEALYQDSVTQTEIQTLAKDDSVSDENELKQSEKVRLVTSEPYEHGSKTTVNSNVE
QAIKESDLLDTTLEEEEEELINGISGINLNEDMLCHEDIHLEMNNCNNVFVAKEYTVVKE
DQELAFVTLAKRDPPAKQECSAESCLYQFTEIEKLADNNKLLCNTCTKRRNMGVHTVSHG
EKNNIYTNAQKQMLISVAPPVLTLHIKRFQQTGYGICKENRHVQFPQILDLAPFCTVGCK
NVTGDKQVLYSLYGVVEHSGTMRSGHYTAFVKVQSNTQCLEHLNGTVPEMVNASAFKGSW
FHISDTSVQAVSEVKVQNAQAYLLFYERLP
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaagagagttaaagaaaagcgctctgataagaaccagccatcagctatttca
ggttctccctgtaaacactgccacaagtctactgatcagaatctacttaaaaagaaacta
caagatggccagttcctcacttgccaggattgtgaagaaagtgtgaataaaaatacaaaa
gatgtaaaagaatgccctgaaagcagtggaatttggatttgtctccgatgtggtcatcgg
ggttgtggaagagattctgaaaatcaacatgctgtaaaacattttgaaaaactacattca
gaccctcactgtttagtcctaagcttggacaactggagtgtttggtgctacatatgtgat
gattatgtgcagtactccagcacaggacatttgggacagcttgtaacgtattttcaaaag
ctatatttttcagggccaagtaagaaaaataaaactaaatgttttaaagagagtgaaaac
caaatacataagttggagaataaaaaggtagaaaaggaaaataaaaatgagcaacacaaa
gacaaccagaagaatgagacagttgtagaaagcaacatcacatcttcacatgaaagcaga
actgtccctgtgaaaggttttagtaatcttggaaacacatgtttcttcaatgcagttcta
cagattctttcacaaacacagctgcttaggcagcttatcaaggaaataaaggatgaagaa
acagtcaaaaatatgtcctttgtgtcaacacagcaggatccgattcagattaagctggac
agaccagggcctttgacattggcactatggaagtttttagctgaaatccaggaaacaaag
aaagctattgtcactccaaaagaattattctttcaagtttgtaaaaaagctgcaaggttt
aaaggatttcagcagcaggacagccaggagctacttcgctatttattggatggaatgaga
tctgaagagtataaaaggataaaagcaggaatttcagaagccttaaatgattctgaaaaa
aaactttccgaagaggaaacgaggaaattagtaacagagtatgaaaagaaagcttttact
caaaattttgttgatcaggtttttagtggagaaataacaagcactattaagtgtgaagaa
tgtgaaacaatatcatttgtaaccgagatgttcctagatttgtctctgtcaatttcttgt
caggcatataaaaaaaagcaaccaaggaagaccgaaaaaaggctaagtgaatttgaagat
aatgatgattcttttgctttgacaattgatatggatgatatccccactagtgttacaagc
aaatatcagcaaaagaaactgaaaaagcaagcaaaaaaacaagcaaaaaatcaccgacgg
caacaaaagttaaaagaaaagattactcctctttgttcagctaatctaaatgtgcaggaa
aatcaatgtaacaacgaggctttgtatcaagacagtgtcacccagacagaaattcaaaca
ttagccaaagatgattcagtttctgatgaaaatgaattgaagcagtcagaaaaagtgaga
cttgtaacttcagaaccttatgaacatggcagcaaaactactgttaactctaatgttgaa
caagccatcaaagaatctgacttattagacaccactttggaggaagaagaagaagaattg
attaatgggattagtggtataaatctgaatgaagatatgctatgccatgaagatatacat
ttagaaatgaataactgtaataatgtgtttgttgccaaagaatacactgtggttaaagaa
gaccaagaattggcttttgttacacttgcaaagagagaccctcctgcaaaacaagaatgt
tcagctgagtcgtgtttatatcagtttactgaaattgagaaactcgctgataataacaag
ctcctttgtaatacctgcaccaagagaaggaatatgggagtgcatactgtgtctcatggt
gagaagaacaatatctacaccaatgcacaaaaacagatgctcatatcagtggcaccccct
gttcttaccctgcatataaaaagatttcagcagactggatacggcatatgtaaagaaaat
aggcatgtgcagtttccccagatccttgatttggccccattttgtactgttggttgcaag
aatgttacaggagataaacaagtgttgtacagcctttacggagtagtggagcacagtggg
accatgcggtctggacattacactgcctttgttaaggtccaaagcaacacccagtgtttg
gagcaccttaatggaacagtgcctgaaatggttaatgccagtgcattcaaaggatcctgg
tttcatataagtgacaccagtgttcaagctgtgtcagaagtgaaggtccaaaatgctcaa
gcctatcttctcttttatgagagacttccatag
DBGET
integrated database retrieval system
