Polypterus senegalus (gray bichir): 120523528
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Entry
120523528 CDS
T08668
Symbol
paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120523528 (paxbp1)
Spliceosome [BR:
psex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120523528 (paxbp1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
120523528
NCBI-ProteinID:
XP_039600861
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Position
2:163891009..164147823
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AA seq
897 aa
AA seq
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MFKKVKRVNFRRRNNSEEEEDSVSSPQSLACTTAEDSVLCHSEPVSQDTVNELHQGNGVQ
SVHPLLREKKKKNKENKDAPKASLLSFQDEEDDNEVFKVKKSNYSKKIVKQLKKEYKDDL
EKISNLKQDLGCAAEETVVPFEQIKEEQVQVESTLISAERGEEEMEVDSNDESDYQSSAG
GFSNALSSLSTLRPGEIPDAAFIHAARKRRQLARELGDSVPNDTESGKKHISQEDENDVS
DDDDDEEKRRIIFTVKEKTQRQKIAEEIGIEGSDDEALDAGIQDEELNRWEQEQIRKGIS
IPQVQTNHQADSNLYYQNVYEATAYGSSYGISYSYGSYGAEDPKLLKPESTGSYTSCSNS
MTPISMDLLKKRLKDRYESMKEVHSKNQKQYEQNQQQLESSTSLIERLEGSSDGIADQYK
FLQEMQGYVRDLLECFSEKVPLILDLESAMHHLLKRRASRLVQRRQDDIKDESSEFASHS
SKTVVAPSLDSFGRDRKAYLENAKQRRIAEREARRTRRRQSREQNGKRAEHHEGLSSDDE
ETSTDTTSFNLEKERIFQDSKKLFEDVLEDFYSIDCIKSRFEIWRKIYYRCYQDAYIGLC
LPKLFNPLVRLQLIPWTPLEANCPDFESMIWFESLLFYGCDEEEETQKGDVDVHLLPSIA
ERVIIPKLAVLIDEVWDPMSTSQSARLVSFVQKLINGYPSVLNGENKSTQELLKTIVMRT
RRTLDDDIFMPLYPKHVLENKNSGPYLFFQRQFWSCVKLLQNILMWHGILSNKCLRELAL
DSLLNRYILLALQNSDPGEDCILKCQSVVECFPMQWFSNQKGQQTIPHLENFCRFLAHLT
STIYRVSIGLSDTEKRIARDHIKTVIKLLASMHAVDHVITVASEHAIKDVKAFLENK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaggtgaagagagtgaatttcagacgacgaaataattctgaggaggaggag
gatagcgtttcgtcgccacagtctttagcgtgcacaactgctgaagacagtgtgctttgc
cattcggagcctgtctcacaggatactgtaaacgagctacatcaagggaatggggtccag
agtgttcatcctttattaagggagaagaagaaaaaaaataaagaaaacaaagacgcacct
aaagcaagcttgctcagctttcaagatgaagaagatgataatgaggttttcaaagtgaag
aaatcgaactatagtaaaaaaatagttaaacagctgaagaaagagtacaaagatgatctg
gagaaaataagcaacttaaaacaggatctaggatgtgcagcagaagagacagttgtacca
tttgaacaaataaaggaagagcaagtgcaagtggagagcactttgatcagtgcagaaagg
ggtgaggaggaaatggaagttgacagcaatgatgaatcggattaccagtcatctgctggt
ggattttctaatgccttatcttcacttagtacattgcgtccaggtgaaattccagatgct
gcctttattcatgcagcccgcaagagaagacagttggctcgtgagcttggtgacagtgtt
cctaatgatactgaatctgggaaaaaacacatttcacaagaggatgaaaatgatgttagt
gatgatgatgatgatgaggagaaacgcagaattatcttcactgtaaaagaaaagacgcaa
aggcaaaagattgcagaggaaataggaattgaaggaagtgatgatgaggctcttgatgca
ggtatacaagatgaagaattaaatcgctgggaacaagaacaaattaggaaaggaattagc
atccctcaggttcagaccaaccaccaggcagattcaaatttgtactaccaaaatgtctat
gaagctactgcctatggctcgtcatatggaatttcctactcctacggttcatatggggca
gaagatcctaaacttttgaagcctgagagtacaggaagttacacatcttgtagtaatagc
atgactcctatcagtatggatttattaaagaaacggctgaaagacaggtatgaatcaatg
aaggaagttcactcaaagaatcagaagcaatatgaacagaatcagcaacagctagaatcc
tccaccagcttgatagagaggctggaaggctcctctgatggcattgctgaccagtataag
ttcttgcaagaaatgcaagggtatgtccgagacttgcttgagtgtttcagtgaaaaggta
cctcttattcttgaccttgagtctgcaatgcatcatttgcttaaacggagagcttccaga
cttgtccagaggcggcaagatgatattaaagatgaatcatcggaatttgcaagtcattca
agcaaaactgtggtagcaccaagcttagactcttttggacgtgatcgaaaggcttatttg
gaaaatgctaaacagcgaagaatagcagaaagagaagctagaaggactcgacgtagacag
tcaagagaacaaaatggaaaaagagcagaacatcatgaaggcctttccagtgatgatgag
gaaacttccacagatacgacaagttttaatttagaaaaagaaagaatttttcaagattct
aagaagctttttgaggatgttttggaggacttttattctattgactgtataaagtcaagg
tttgaaatatggagaaagatctattacagatgttaccaagatgcatatattggactttgc
ttgccaaaactcttcaatcctttggtacgactacaacttatcccttggacacctttagag
gcaaactgtcctgattttgaatctatgatctggtttgaatctttgcttttttatggctgt
gatgaagaggaagagacacaaaaaggtgacgttgatgttcatcttcttccatcaatagct
gagagggtaatcattccaaagcttgcagttttaattgatgaagtatgggatcccatgtca
actagtcaaagtgcacggctggtatcttttgtgcagaaattaattaatggctatccatca
gttctaaatggtgaaaacaaaagcacacaggagctgttaaaaacaattgtgatgcggaca
cgaagaaccttggatgatgatattttcatgcctttatatcccaagcatgttttagaaaac
aaaaacagtggaccatatttgttttttcagagacagttctggtcctgtgtaaagctcctt
cagaatattctcatgtggcatggaattctttcaaataaatgcctgagagaactggcattg
gacagcctattgaatcgttatattcttctagctcttcagaattctgatcctggggaagac
tgcattttaaaatgtcaaagtgtggtggaatgttttcccatgcagtggttttcaaatcaa
aaagggcaacagactatcccccatttagagaatttttgccgcttccttgcacatttaacc
agcacaatatacagggtcagcattggtctttctgatacagaaaaaagaattgcaagggat
catatcaagactgtaatcaagctgctagctagcatgcacgctgtggatcatgtgattaca
gttgccagtgagcatgccataaaggatgtaaaagcatttcttgaaaacaaataa
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