Polypterus senegalus (gray bichir): 120523575
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Entry
120523575 CDS
T08668
Name
(RefSeq) rho guanine nucleotide exchange factor 40-like isoform X1
Organism
psex
Polypterus senegalus (gray bichir)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
120523575
NCBI-ProteinID:
XP_039600921
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Position
1:complement(26853992..27091025)
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AA seq
1981 aa
AA seq
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MGSQAVEDCVQSALSSLYPPFEVTAPPLLSQVFSVLEGTYHHDSLRYLVDFFVPAKHLLQ
RLQQEACSQYIGFLFLHEGWPLCLHEKVVVHLSTLDWKNLQPGDFYLQVVPFSARTPRLA
VKCLSTGGRTVQEILVPESDHSHIFTPEWLNGLNKERTGTRLERCLLITDTGLIRATWEE
IVYPQFIHKPGSMVGSLVTSADPTLLRVPAVQNEEFDHNNSEFPTHPTEEKHLHNDSNLK
NELEGEYVELLEIDVKECYLNPGEADSKRRYLEVHGISKTKTVPLCKSQNKGKSKRHRAW
LHPKTGGTVKPLLPCSMTQVERPESSEQFLNMGDHEIKELGPEVMTDLRGLVIEPEVVHD
LIHVSSTEFDHFSSGSDGEGFSPLPWTGSPTLQIESKHVESGAQNQSAQENISSKSDDNG
TNQKAAKDMSHKDIPQLNLSMHPSSQKTNIAIAEGQNLTNSPDTGNDSSKVELSESVGSS
VQITQFSQDASMKEETTLSLCNDAEQNQQPVLNSLKPLSKNKTKQDDKTPATEKTLDTKN
NCNLLLDRNNSGNSTTVAKGSSEHSVRPETKLPSQQSLVPTTEETKSKSECNNNSNLICP
MDHKNSDSKKNPKGKPLGSNNADPSPAVAEGDKVPVAKVNVTRNPASKGHRRKKKGKSGR
GKSKATEQAGRGNKALQNAKDRPATPSKEKQSVQTQDPDIKAGENNTASDLPAFATDEPS
ISEDRQPGDNGEHLPPLPECDAQPQVVSSADDAGDLQQDSSHQDVTPSENCEMTLRSNNE
PDPPTGEHHTHSLEGEEEQPKVEQIADDSCSSPPLLRDLNPELLLSGLLTLPGTHDKEGH
NLVLIEMKNPSWQYSTEEVARALACFHSLTRVSSKESELTILLDSRRTLFSMDILSPLQA
FQEKSPSAIYRVLLVLDHDSTISVENISPLQLVVVRGLSALQTHVDSTQLPISLGGASVH
CHSDWISFQLRLEEFSLSCQRALSLLGEALDFLEKHQLPDSTKTVASCVDDHQKLMKTVL
VDERITCLQMEGGAKLARLRREADHSSMSQTCRDSLSTTSDLYNRVDDALHQLVMLSNQR
LRDLETIGRLGALESKLEKVVHWVSEVGMTSLESYKDLGDSLELLRQKQKEFIEFSRTAG
EHCCDGFEALRKIECWDYFPSPGLQVIQEKVPEYRQKLQEFSTAVGKCQSTMEKTIQLYE
FFSEAYNWSLEVMRHLSQVSAEDCMSSAHCSEALVRLQRCCRDLPEISEPRFAEAQSIAK
EIGNTTSNKTIMDHWTFAKTKYTETCSVLHQRLEMAQKTQRAKLGGVPSRSMTNLCLEAQ
QSVLHSWGSLASLHQDPFFPNHTSTLRADDVPNDNNSIGINSTSSTPFPWLGNAALKPSS
SRWYLQGFLKDNTKQSTCLENISAPCKPNRKRNPSFDFQALLGSRRASKDAGKVEDSVSS
PLLWLGRKSAQLGPKAGQTGVHIKGLEVSSREVVDQTCSPRQHVLLARTGVPIMNAPWGC
TPKQERKNTSSSKTQRLASVLASSELEYVSALHHVEECYLPETERRDLPQELRGKRGVIF
ANWEKLTAFHAHFLLPIIEDAVSQPLSLGDCFLKFRQQFKLYSLYIKNKPKCDVLLSSQG
NSFFKRRQLELKDPLDLSQYLQAPLLRLQQYCDILNELTKECCPERDQQSLQSLQNAVAM
LRFVIQHGEDLQASDRITACDVSLTEQGELLRQNEFTVLGGRKKVIRQMFLFEDLLLFTK
QKTLHGGQTAYIYKHSVKTADIGLTENIGDSGTRFEIWVRHSKSKEAYILQARSPDVKQM
WTQDLARLLWSQAMRNKELRLQESLSMGMCSKPFLDIKSSSSNICDRNIDYFLNGRGSRS
RASVAVSSFSSDSSFRSPSPLPSPLLSPVLGPLDLHFGHGTHFHQSRFYPESIKEEDDAF
STGNLLDSSGSSSCGSGQQSQQDLKSMNLDVAGLFNHNSSSSSQYKMQKSDQHVERQSTV
V
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atgggttcccaggctgtggaggactgtgtacagagcgccctctcttcactttatcctcca
tttgaagtgacggctcccccactcctctcacaggttttttctgtgctagagggaacatac
caccatgactcgctgagatatctagtcgacttctttgtgccagccaagcacctcctgcaa
cgtctccagcaagaagcctgttcccagtatattggcttcctgtttctccatgaaggatgg
cctttatgtcttcatgagaaggttgttgttcacttgtccacactcgattggaagaatctt
cagcctggagacttctacttgcaagtggttcccttttctgctaggactcccagactagct
gtcaaatgtctgtctactggaggacgcacagtacaagagatcctagtgccagagtctgac
catagccatatttttactccagaatggctcaatggtcttaacaaagaaaggacaggaacc
cgactggaacgatgtctccttataactgatactggcctgatccgggcaacctgggaagag
attgtctaccctcagtttattcataagcctggaagcatggtggggagtttggttacaagt
gcagaccctacacttctaagggttcctgcagtacaaaatgaggagtttgaccataacaat
tctgaattccctacacatccaacagaggaaaagcacttacataatgactcaaatcttaaa
aatgaactggaaggagagtatgtagaacttcttgaaattgatgtaaaggagtgctattta
aatcctggagaagctgactcaaaacgaaggtatctagaggtacatggaatttcaaaaacg
aaaacggtccccctttgcaaaagccaaaacaaagggaagagcaaaagacacagagcatgg
cttcatccaaaaaccggtgggactgttaaaccacttctgccttgcagcatgacacaggtt
gagaggccggagtcatcagagcaatttctgaacatgggagatcatgaaatcaaggaattg
ggtcctgaagtaatgactgatctgcgtggccttgtgattgaacctgaggtggttcatgat
ctcattcatgtaagcagtacggaatttgatcatttctcctcaggatcagatggtgaaggt
tttagtccactgccttggacaggcagtcctacattgcaaattgaaagcaaacatgttgaa
tctggtgctcaaaaccaatccgcccaagaaaatatttctagcaagtctgacgataatggt
acaaatcaaaaagctgctaaggatatgtcacataaagacattccacaactaaacctttcc
atgcatccttcatctcagaaaacgaatattgctattgcagaaggtcagaaccttaccaat
tcacctgatacaggcaatgatagcagcaaagtagaactgtcagaaagtgtaggctcttct
gtccagataactcaattttcacaagacgcatcgatgaaagaagagacaacactttcctta
tgcaatgatgcagagcaaaaccaacagcctgtgttaaattcattgaaaccactgagtaaa
aataaaaccaagcaggatgacaaaacaccagcaactgaaaagactttggacacaaagaac
aattgtaatttgcttttagacaggaataactcaggtaattcaactactgtggccaagggt
tcatcagagcattctgtgagaccggaaaccaaattaccttctcaacagtcattggttcca
actactgaggaaacaaaatcaaaatctgaatgtaacaacaattccaacctcatttgtccc
atggatcataaaaattctgactcaaaaaagaatcctaaaggaaaacctttaggttcaaat
aatgctgatccatcgccagctgtggccgaaggggacaaagtgccagtcgccaaagtaaat
gtaacaaggaatcctgcatctaaaggccacaggaggaaaaaaaagggtaaatctggcaga
ggaaagtcaaaggctactgaacaagcaggaagaggaaataaggctctccagaatgcaaaa
gaccgcccagcgactcccagcaaagagaagcagtctgtgcaaacgcaggaccctgacatc
aaagctggagaaaacaacacagcttcagatttaccagcctttgccaccgacgagcctagc
atttcagaggatcgtcagcctggggacaacggggaacatttgccacctctgcctgaatgt
gacgctcagccacaggtggtcagttctgctgatgacgctggagatttgcagcaagattca
tcacaccaggatgttactccatctgaaaactgcgaaatgacactcaggtccaataatgaa
ccagatccacccacgggggagcaccatactcacagcctggaaggagaagaggaacaacca
aaggttgagcaaattgctgatgattcgtgctccagtccacctctactccgtgacttgaat
cctgagcttctgctgtccgggctgctgacactaccaggtactcatgacaaggaaggccac
aatcttgttttgattgagatgaagaatccaagctggcagtactccacagaggaagtggca
cgagcactggcgtgtttccattcactcaccagggtgtcatccaaagaatctgaactcact
attttgttagactctcgtcgcaccctcttctcgatggatattttgtctccacttcaggct
ttccaggagaagtcaccatctgcaatttacagagtcctgttggtactcgatcatgattca
accatcagtgtggagaacatctcacccctacagttggtggtggtgaggggattatcagca
ctgcaaacacatgtggattctacacagcttcctattagcctgggtggtgcctctgttcac
tgtcacagtgactggatctcttttcaactgcgattagaagaattctcgctttcctgtcag
agggctttgtctctcctaggagaggcattggatttccttgaaaaacatcagttgcctgac
tccaccaagacagtcgcctcttgtgttgatgatcaccagaagctaatgaaaaccgtattg
gtagatgagaggattacttgcctacagatggaaggaggagcaaagctggcccgacttcgc
cgagaggcagaccattcctccatgtctcagacctgcagggattcactctccaccacctct
gacctttataacagagtggatgatgctcttcatcagttggtcatgctatccaatcaacgg
ctgcgagacctggaaaccattggacgactgggtgccttagaatccaaactggaaaaggtg
gtgcactgggtatcagaggttggaatgaccagcctggagagctacaaagatcttggggac
tccctggagttacttaggcaaaaacagaaggagtttattgaattcagtcggacagcaggg
gagcattgctgcgatggctttgaagctctaagaaagattgaatgctgggattattttcct
tcccctggacttcaggtcatccaagaaaaggtgccagaatacagacaaaaactccaggaa
ttttccaccgctgtagggaaatgtcagagcaccatggagaaaacgatccaactttatgaa
tttttcagtgaggcctacaactggtcactggaagtgatgcgtcatctttctcaggtctca
gcagaggactgcatgtcttcagcccattgttcggaagccctggtccgtttgcagcgttgc
tgtcgggatttaccagaaatttctgaaccaaggtttgctgaagctcagagcatagccaag
gaaattggaaacactacctcaaacaaaacaatcatggaccactggacattcgccaagacc
aaatatacagagacatgctcagtgttgcatcaaagactggaaatggcacaaaaaacacaa
cgagcaaaactcggcggagtgccctcaaggagtatgaccaatctttgccttgaagctcag
cagtcagtcctgcattcatggggctctttagcttctctacaccaagaccccttctttcca
aatcacacttccactttaagggctgatgatgtccccaatgacaataattctataggaatt
aatagcacctcttcaactcctttcccttggctggggaatgcagctttgaaaccttcatca
tctcgatggtatctgcaaggtttcttaaaagataataccaagcagtcaacatgcctggaa
aatatttcagctccttgtaagccaaaccggaaaaggaaccctagctttgacttccaggct
cttcttggatccagaagagcttcaaaagacgcagggaaggtagaggactctgtgtcatct
cccttgctctggcttggtagaaaatccgcacagttgggtcccaaagcgggtcagactgga
gtgcatataaagggattagaagtaagtagcagagaagtagtggatcagacttgttcaccc
agacaacatgttcttctggcccggactggggtgcctataatgaacgcaccctggggatgt
acaccaaaacaggaacgaaagaacactagcagcagtaaaactcagaggttagcttctgta
ctggccagctctgaactcgagtatgtgagtgctctgcaccatgtggaagagtgctacctt
cctgagacagaacgacgggaccttcctcaggaactgcgggggaaacgaggggtgatcttt
gccaattgggagaagctgacggcttttcatgctcatttcctcctcccaatcattgaggat
gctgtcagtcaacctctgtcacttggagactgctttctaaaatttagacaacaatttaaa
ctttattccctttacataaagaacaagcccaagtgtgatgttctactctcaagtcaagga
aattctttcttcaagcggcgacagctagagcttaaggaccctcttgatttatcccaatac
cttcaagcaccattgctgaggctgcagcagtactgtgacatcctgaatgagctcacgaag
gaatgctgtccagagagagatcaacagagcctccaaagcctgcagaatgctgttgccatg
ctgagatttgtaattcagcacggagaagatcttcaagccagcgaccgcataacagcatgt
gatgtgagcttgactgagcagggggagttactgcgacagaatgagttcacagtcttggga
gggcggaagaaggtcatccggcagatgttcttatttgaagacctcctgttattcaccaag
cagaagacgctgcacggaggccagacggcatacatctacaagcattctgtgaagactgct
gatatcggcttgacagaaaacattggggattcaggaaccaggtttgagatttgggtccgc
cattcgaaatctaaggaggcttacattctacaggcccgttctccagatgtcaagcagatg
tggactcaggatttggcacgcctgctttggagtcaagccatgagaaacaaagaattacgt
cttcaggaatcactttctatgggcatgtgcagcaagccattcttggacattaagagcagc
tcctctaatatctgcgatcgcaacattgattatttcctcaatggaagaggttcccgaagc
agagcctctgtggccgtgtcgtccttctctagtgacagctccttcaggagtccatcgcct
ttgccctctcctctcctctcccctgtcctgggacccttggacttgcactttggtcatggc
acacacttccatcaatctcgtttttacccagaaagcatcaaagaagaagatgatgccttt
tctacaggaaacttgcttgacagttcaggctcttcatcttgtggcagtggtcaacagagc
cagcaagatctaaaatccatgaacctggatgttgcaggactcttcaaccacaacagcagc
agcagctctcaatacaaaatgcagaaatccgatcagcacgttgaaagacagtcaacagtc
gtctaa
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