Polypterus senegalus (gray bichir): 120523782
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Entry
120523782 CDS
T08668
Symbol
slitrk6
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04514
Cell adhesion molecules
psex04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120523782 (slitrk6)
04517 IgSF CAM signaling
120523782 (slitrk6)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LapA_dom
LRR_LRWD1
TMEM154
Sema4F_C
DUF6264
Motif
Other DBs
NCBI-GeneID:
120523782
NCBI-ProteinID:
XP_039601316
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Position
2:complement(245581263..245597876)
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AA seq
828 aa
AA seq
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MFNWAFIVSFFFAAANFQSLQSFKTSTKASCDSLCSCDEKDGILYINCEEKNISKISQVK
VPPSQPFHLNLFKNEIAELHASEMESLSNAISLHLGGNSIQELEPGVFSALSSLKKLHIN
SNFLITLKEDTFRGLENLEYLQADSNFIRVIEPGAFSKLVRLKVLILNDNEIEFLPTNIF
RFVPLTHLDLRGNQLRTLPYVGFLEHIGRIMELLLEDNKWVCDCDILPLKTWIENMRAQS
VIGEVMCNSPENLKGNLLNKVKRDVLCRFHTLIDSEEPSKSSYLIVTPSSKGSPVPKFTQ
DDAKITTPALAPDMVCPLKCYCNNHPLAGLLIHCQDAGIQSMAELGSQIQRPQKLLLAGN
KIQRLIKSDLINYESLEILNLENNRIESIQDETFLNLGNLQKLYLSGNKLERLKPGMFVG
LHNVEYLYLEFNMIKDILSGTFSIMTKLKLLFLNNNRLQSLPPLIFRHVPLARINLRNNQ
FMHLPVSNVLDQLDSLEQIYLEDNPWDCTCDLVGLKQWVERLNKNVMVGEILCRTPKKFA
KNDLRSVRNELLCSGLVIDVQPTQESRTVTTTATSVSTVSGLFGSFSDTVPLSVLILGLL
IVFLMIVFCAAGLIVLVLHRRRKSKKKQVEDQTRETSPIHLQYSMYGQKTTHHMAQRPGA
HMYDEHTITPVVQVCRSPSYCANLKDQEQVEFALHDSKHICRGILEKENDSPLTGSNVKF
KAVTERPTEFLSLGDANSLYRNILERERELQQLSITEYLKKNISHLQPSVEVHCPGRHEE
LKLMETIMYTRPRKVMVEQTKNEYFELKANLHTEPDYLEVLEQQTTLN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattgggcctttattgtatccttcttcttcgctgctgctaatttccaaagcctt
cagtctttcaagacatcaaccaaagcatcatgtgacagcttatgcagctgcgatgaaaaa
gatggcattctctatataaactgtgaagaaaaaaacatcagcaagatttctcaagtcaag
gtgccaccttctcaaccttttcaccttaatctcttcaaaaatgaaatagcagaactgcat
gcttctgagatggaaagtttgagcaatgcaatttccttacatcttggaggaaacagcatt
caggagttggaacctggtgtcttcagtgcccttagttcactaaaaaaattgcatataaac
agcaactttctaataacactaaaagaggacaccttccggggactagaaaatctggaatat
cttcaagctgattcaaatttcattcgcgtgattgaacctggagctttcagcaaacttgta
cgattgaaagttcttattcttaatgacaatgaaattgagtttcttcccactaatattttt
cggtttgtacctctaacacacttagacctacgtggaaatcagcttcggacacttccatat
gtaggttttctggagcacattggccgcataatggaacttttgcttgaggataataaatgg
gtttgtgactgtgatatactgccacttaagacatggatcgaaaacatgcgtgcacagtct
gtcattggagaggtaatgtgtaacagccctgaaaatctaaaaggcaacttattgaacaaa
gtgaaaagggatgttttatgccggtttcatactttaattgactcagaagaaccgtccaag
tcttcatacttaatcgttactccatcatcaaagggtagcccagttccaaaatttacacaa
gatgatgcaaaaataactactcctgcactagccccagatatggtttgtcccttaaagtgt
tattgtaataatcatccccttgcaggtctactgatacactgccaagatgctggaattcaa
agcatggctgagcttgggtcacaaatacagagaccccagaagctccttttagcaggaaat
aagattcagcgactgataaaatcagacctgataaattatgagagcttggaaatacttaat
cttgaaaataaccgtattgaaagtattcaggatgagacttttttaaaccttggaaatcta
caaaagctctacctaagtggaaataagcttgaacgcttaaaacctggcatgtttgtgggc
ctccataatgttgaatatttatatctggagtttaatatgattaaagacatactttctggc
actttcagcatcatgacaaaattaaaacttctgtttttaaacaataatcgtctccagagt
cttccaccacttatctttcgacatgtgccacttgcccgaattaaccttcgaaataaccag
ttcatgcatttacctgtaagcaatgtactggatcagctcgattcattggaacagatatac
ttggaagacaacccgtgggactgcacgtgtgatttagttggtctcaaacagtgggttgaa
agacttaacaaaaatgtaatggtgggggagattttgtgcagaactcccaaaaaatttgcc
aaaaatgatttgagatctgtcagaaatgaacttctttgctccggtttagtaattgatgtc
cagccaacccaagaaagtcgaactgtaacaacaacagcaacgagtgtgagcactgtatca
ggtctatttggctccttttctgacacggtgcccctttcagttttaattctaggactgctg
attgtttttctaatgattgttttctgtgctgctggactcatagtgctcgttttgcaccgc
cgccgaaaatctaagaaaaagcaagtcgaagatcagactagagaaactagccctatccac
cttcagtacagcatgtatggtcaaaaaactactcatcatatggctcagagacctggagct
catatgtacgatgaacataccattacaccagtcgtgcaggtttgcagaagtccttcatat
tgtgcaaatttgaaagaccaggagcaggtagaatttgctcttcatgactcaaagcacatt
tgcagaggaattctagaaaaagaaaatgactcacctctgacaggatcaaatgtgaaattt
aaagcagtaactgaacgtccaactgagtttctttcactcggtgatgcaaattctctttac
agaaatatccttgaaagagaaagagaactccagcagcttagcatcacagagtacctcaaa
aaaaacatttctcaccttcaaccaagcgttgaagttcattgccccgggaggcatgaggag
ctaaaattaatggagacaattatgtacaccaggccaaggaaggtcatggtggaacaaact
aaaaatgagtattttgagcttaaagccaatctgcacacagaacctgactacctggaggta
ctagaacagcaaacaactttgaactga
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