Polypterus senegalus (gray bichir): 120523788
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Entry
120523788 CDS
T08668
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
psex00535
]
120523788 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psex00537
]
120523788 (gpc6a)
Proteoglycans [BR:
psex00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
120523788 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psex00537
]
Others
120523788 (gpc6a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
TOP_N
DUF5856
Motif
Other DBs
NCBI-GeneID:
120523788
NCBI-ProteinID:
XP_039601321
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Position
2:253729000..255051757
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AA seq
561 aa
AA seq
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MLWIWAIFCTLSVLSRSVVADLKARSCVEVRQAYSAKGFSLVNVPHQEISGEHLRICPQG
YTCCTSEMEDKLSQQSKLEFENLVEETSHSLRTTFVSRHKKFDEFFRELLENTKRSLNDM
FVRTYGQLYMQNSEVFQDLFAELKRYYTGGNVNLEEMLNDFWARLLERMFQLVNTQYHFT
EDYLECISKYTDQLKPFGDVPRKLNIQVTRAFIAARTFVQGLTVGREVANRVSKVSPTPG
CIRALMKMLYCPYCRGIPAVKPCNNYCLNVMKGCLANQADLDPEWNLFIDAMLLVAERLE
GPFNIESVMEPIDVKISEAIMNMQDNSMQVSSKVFQGCGQPKPANSGRSSRAVSDVFNHR
FRPYSPEERPTTAAGTNLDRLRTVWKTMQHSVIDIKEKLKQSKKFWSILPDSICRDVKVT
SGKSNEEDCWNGHTEGRYLPEVMNSGLTNQINNPEVEVDITRPDTFIRQQIMALRVMTNK
LKNAYNGNDVNFQDTSDETSGSGSGSGCTEPCNTEFFIPTEASPIGATRNEGKSSAGKPG
FSLVLPVFLSCTSLLVLRQWR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggatctgggctatcttttgcacgctgtccgtgttgtcacgttcagtcgtggcg
gatctgaaagcgcggagctgcgtggaggtcaggcaggcttactccgccaaaggcttcagt
cttgtcaatgtccctcaccaggagatatcaggggaacatctgcggatctgtcctcaggga
tacacatgttgcacatctgaaatggaagacaaactcagccaacaaagcaaattggagttt
gaaaatcttgtggaagaaacaagtcactcattacgcacaacatttgtatcccggcataaa
aaatttgatgaattcttccgtgagctcctggaaaacacaaagcggtcccttaatgatatg
tttgtgaggacatatggtcaattgtacatgcaaaactcagaagtctttcaggaccttttt
gccgagttgaagagatattacactggtgggaatgtcaaccttgaggagatgctgaatgat
ttttgggctcggttgttggagcgaatgtttcaactagtgaacactcagtaccactttact
gaagactacttggagtgcataagcaaatatactgatcagcttaaaccttttggggatgtg
cccagaaaactcaatatacaggttactagagcatttattgctgcccgcacttttgtccaa
gggctgactgttggaagagaagttgccaatagagtgtctaaggtcagtccaacacctggg
tgcatccgagcccttatgaagatgttatactgtccgtactgccgtgggataccagccgta
aaaccctgcaacaactactgtttaaatgtaatgaagggatgccttgcaaaccaagctgat
cttgacccagagtggaatcttttcattgatgcaatgctgttggtggcagagaggctagag
gggccattcaacattgagtctgttatggagcccattgatgtcaagatatcagaagccatc
atgaatatgcaggataacagcatgcaagtctcctcaaaggtttttcaaggatgtggacaa
cccaagcctgccaactcaggaaggtcttcacgagccgtttccgatgtatttaaccatcgt
tttagaccctacagtccagaggagagaccaactacagctgcaggaacaaatctggataga
ctgaggacagtgtggaagacgatgcaacacagtgtaattgatattaaagaaaaattaaag
cagtccaaaaagttctggtctatcttacctgacagcatctgcagggatgtgaaagtgaca
agtggcaaatcaaatgaagaagactgctggaatggacacacggaaggaaggtacttgcct
gaagtgatgaacagtggcctgactaatcagattaacaaccctgaagttgaggtggacatc
acaagacctgacacattcatccgtcagcagatcatggctctcagagtaatgactaacaag
ctcaagaatgcttacaatggaaatgatgtcaattttcaagacacgagtgatgaaaccagt
ggatctggaagtggcagcggctgcacagaaccatgcaacactgaatttttcatcccaacg
gaagcctccccaattggcgctacccggaatgaagggaaatcttcagcaggcaaaccaggt
ttttccttagtactccccgtgttccttagctgcacaagccttctagtgctaaggcaatgg
agataa
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