Polypterus senegalus (gray bichir): 120523828
Help
Entry
120523828 CDS
T08668
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120523828 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120523828 (nup58)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120523828 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
GCP_N_terminal
Nup49_C
FapA
PSY3
JAKMIP_CC3
TBCA
Siah-Interact_N
ASNSD1-SEP
DUF4168
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
120523828
NCBI-ProteinID:
XP_039601407
LinkDB
All DBs
Position
2:264138338..264237304
Genome browser
AA seq
575 aa
AA seq
DB search
MAGFNFGSGALGSTAAGEGFTFGASTSAPAATGGFSFGGLTSNTTTTTSSLGLGNSLFAQ
KPTTGFSFGGSNTGTASTSTTSTGLSLGFNKPAASATPFSLPVSSSSGGGLSLVSTLTSS
APSAATSGFSFNLGGTPTTSSAPSAVLSLGSTGLGSSLFAAPFASGQGQNTLGLGLSSIG
TTTASSVSEGLGGVDFSSSSDKKTDKSSGTRPEDSKALKDENLPTLICQDVDNFQKFVKE
QKQVQEEISRMSSKAMQKVQEDIKSLKQILSVAASGIQRNSLSIDKLKIETAQELKNADI
ALRTQKTPPGLQHENTTPSDYFRALVEQFEVQLQQYRQQIEELENHLTTQANSSHITPQD
LSLAMQKLYETFVALAAQLHAVHENVKILKHQYLGYRKAFLEDTTDVFESKRATNKKWSG
SPRVTTGPAPFSSIPNAAAVAMAATLTQQQQPATGPQPALGVSFGAPFGSGIGTGLQSSG
LGSSSFGAFGSGPGFGGGSTGSSTFGFGSANKPSGSLSAGFGSSSTSGFNFSSPGITASA
GLTFGVSNPSSTSFSTGGQMLQLKKPPAGNKRGKR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctttaattttggaagcggagctctcggttctactgccgcaggagaaggattt
acatttggggcctcgaccagtgcccctgcagctacaggaggttttagctttggaggtctt
acttcaaatactactacaactacttcttctttgggactgggaaacagcctgtttgctcag
aaacctactacaggattctcttttggaggaagcaatacaggaactgcttcaaccagtact
acaagtactggcttaagtttaggatttaacaaaccagctgcatcagcaaccccatttagt
ttgccagtttcttcatcttctggtggaggtctttctcttgtttcaacgctgacatcttct
gcaccttcagcagctacatcagggttttcatttaacctagggggcacacctaccacatct
tcagcaccatctgctgtactgtctttgggatctacaggtttaggcagtagtctttttgca
gccccttttgcttcaggacagggacaaaatactcttggattaggcctatcttctataggt
actacaactgcctcttcagtcagtgaaggacttggtggagttgattttagcagttcatca
gataaaaaaactgacaaatcctctggaacacgtcccgaggatagtaaagcactaaaggat
gaaaacctaccaactctaatctgtcaagatgtggataattttcagaaatttgttaaagaa
cagaagcaggttcaagaagaaataagccgtatgtcttctaaagcgatgcagaaagttcag
gaagatatcaaaagtctaaaacagatcttgtctgtagcagctagtggcattcagagaaac
agcttgtccatcgataagttaaaaattgaaactgcacaggagttaaagaatgctgatatt
gcacttcgaacgcaaaaaacgcccccaggtcttcaacatgaaaatacaaccccatcagac
tattttagagcacttgtagaacaatttgaggtacagttgcaacagtatcgacagcagata
gaagaacttgaaaatcaccttaccactcaagccaacagctctcatataacacctcaagat
ctatctttggcaatgcagaagctttatgagacattcgttgctttagcagctcaacttcat
gcagtgcatgaaaatgtaaagattttaaaacatcaatatcttggctacagaaaagctttt
ttggaagatactactgatgtatttgaatcgaaaagggcaaccaataagaaatggtcagga
tctcctcgggtcactactggaccagctcctttcagcagtattcccaatgcagcagctgtt
gccatggctgcaactctaacacagcagcagcagcctgctacagggcctcagccagcactg
ggagttagttttggtgcaccattcggctccggtattggcactgggctgcaatcaagcggc
ttaggctcttcaagctttggagcatttggcagtggcccgggttttggaggtggttctaca
ggaagttccacatttggatttggttctgcaaacaaaccctcagggagtctaagtgcagga
tttggcagctcaagtacttccggatttaacttcagcagccctggcataacagcatcggcg
ggtctaacctttggtgtgtccaatccttcttctactagcttcagtacaggtggacaaatg
cttcagttgaaaaaacctccagctggaaacaagaggggcaaaagatag
DBGET
integrated database retrieval system
