Polypterus senegalus (gray bichir): 120523902
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Entry
120523902 CDS
T08668
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120523902 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psex03032
]
120523902 (pola1)
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120523902 (pola1)
DNA replication proteins [BR:
psex03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
120523902 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
Motif
Other DBs
NCBI-GeneID:
120523902
NCBI-ProteinID:
XP_039601540
LinkDB
All DBs
Position
2:274718455..275148573
Genome browser
AA seq
1491 aa
AA seq
DB search
MAPVSNSDTDADNQDKDKDIGLATSRSRREKKEKTGRKSALDLLKKAKAGEKIKYEVEDF
SSVYEEVDEEQYSRLVRERQDDDWIIDDDGTGYVEDGREIFDEELDEDALDTNSKGKGND
KGNKKKDSKNVKKTSVSKPNSIKSMFLASTVKSSEKDIDLSKDDLLGDILQDLHSENSSL
LTPPPVMTLKKKKKPVGVPLNPFSVKTSTVKASTSSTVMKPIPSQIHPPSSSFQKIESNR
GAQNGAKITTVKCVATEESVKIKEEDPSQSSEKMEEHVFDEGDFDDPMEAEDDGEAVPQN
TKDEKCEPVVNTLADIKPETKETAIQSAAAPETTCWERMAEGDGSSAVSEVQVDSSQLPL
VTGADGEKVFRFYWLDAFEDQYTQPGVVYLFGKVWIESAEMYVSCCVTVKNIERTVYLLP
REKQINLKTGEETDNPVTMMQVYQEFNDKIAEKYKIMKFRSKKVEKNYAFEIPDVPAKSE
YLEVRYSAELPQLPQDLKGETFSHVFGTNTTGLEHLLLSRKFKGPSWLEVKTPQLSSQPV
SWCKVEAVAVRSHLVTVVKDLAPPPLVVLSLSMKTMQNAKSHQNEIVSLAALVHHKFPLD
KAPPQPPFQNYFCVISKPNDCIFPYDFKDAVAKKNAKIEIAATERTLLGLLLAKIHKIDP
DVIVGHDIYGFDLEVILQRITACKVPHWSKIGRLRRSIMPKLGGRSGFAEKNAACGRMIC
DVQISAKELIRCKSYHLSELVLHIIKTERVVIPPEAIKNHYNDSSHLLYLLENTWMDAKF
ILQIMCELNVLPLALQITSISGNVMSRTLMGGRSERNEYLLLHAFYEKDYIVPDKQLFKK
PQIDLVDDEEDVDVTQGKTKKGRKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQE
FNICFTTVERVSAISRKASEVDEVDEIPELPDPDLEIGILPKEIKKLVERRRQVKQLMKQ
PDLNADLYLQYDIRQKALKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKDMV
MKMNLEVIYGDTDSIMINTNSNNLEEVFKLGNKVKSEINKLYKLLEIDIDGVFKSLLLLK
KKKYAALVVEQTGDGRYITKQELKGLDIVRRDWCDLAKECGNYVISQILSDQPRDIIVEN
IQRRLIEIGEKVVNGSIPLNQFEIHKALTKDPQDYPDKKSLPHVHVALWVNSQGGRKVKA
GDTISYVICQDGTNLSASQRAYALDQLTKQENLRIDNQYYLSQQIHPVVSRICEPIEGID
SVLIATWLGLDPSQFRSHQQYQKDEENEALLGVPAQLTDEEKYRDCERFKFICSQCKTEN
IYDNVFDGSGKVIEPSLIRCSNITCEASPLSFVTQMCNKLILDIRRHIKIYYMGWLVCEE
QTCQNRTRRIPLNFSRSGAMCQACMKASLRPEYPEKALYTQLCFYRFIFDWDYAMEKIVS
KDERDYLNPLYKDDVKHLYKKLKDVADKAVSASGYSEVNLSKLFQSFVAMK
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgtgtcgaattcggatacggatgctgataaccaggataaggataaggacatt
ggcctggccacatctcgatcaagacgggagaagaaggaaaaaactggtcgaaagtctgct
cttgacttattgaagaaagccaaagctggggaaaagatcaaatatgaggtggaagatttt
agcagtgtttatgaggaagtggatgaggagcagtattcaaggctagttcgtgagcgacag
gatgatgactggatcattgatgatgatggaactggctatgtagaagatggtagagagatc
tttgatgaagaacttgatgaagatgcattagacacaaattcaaaaggaaaaggaaatgac
aaagggaataagaagaaggactccaaaaatgtaaagaagacatctgtttcaaagcccaat
agcatcaaatcaatgtttctggccagcacagtaaagagttcagagaaagatattgatttg
tcaaaggatgaccttctgggtgacatactgcaggatctccattctgagaattcttcactg
ctaactccaccaccagtgatgactttgaagaagaagaagaagccagtaggagtgccttta
aatccattttctgtgaaaacatcaactgtgaaggcatccacatcttcaactgtgatgaaa
cccataccctctcaaattcacccgcccagctcatcctttcagaaaatagaaagcaatcgg
ggggctcagaatggagcaaagattaccactgtaaagtgtgtagcaacagaagaatccgtg
aaaattaaggaggaagatccatctcaatcttctgaaaaaatggaagagcatgtatttgat
gaaggtgactttgatgatccaatggaagcagaagatgacggagaggctgtaccacagaat
accaaggatgaaaaatgtgaacccgtggtgaataccttggctgacatcaagccagaaact
aaagagacagcaattcaatctgctgctgctccagaaacaacttgctgggaacgtatggct
gagggagatggtagttcagcagtttcagaagtacaagtagactccagccagcttccatta
gttactggtgccgatggagagaaagtcttccgattttactggctggatgcatttgaggac
caatatactcagccaggtgttgtatatttatttggtaaagtttggattgaatctgcagag
atgtacgttagctgctgtgttactgtgaagaatattgaacgaacagtgtatttgcttcca
cgggaaaagcaaataaatcttaaaactggcgaagaaacagataacccagttaccatgatg
caggtctaccaggaattcaatgacaagattgcagaaaaatacaagataatgaagttcaga
tcaaagaaagttgagaagaactatgcttttgaaattcctgatgttcctgcaaaatctgag
tacttagaagtgagatactctgctgaattaccacaacttccccaagatcttaaaggggaa
acattttctcatgtatttggaacaaatacaactgggctggaacacttactcctgagcaga
aagtttaaaggaccgtcttggctggaagtgaaaaccccacagctgtccagccagcctgta
agctggtgcaaagtggaggctgttgcagtgaggagtcatttagtaactgtagtaaaagac
cttgcaccacctcctttagttgttctttccctaagcatgaagactatgcagaatgcaaaa
tcccatcaaaacgagattgtgtctctagcagcccttgttcatcacaaatttccactggat
aaagcaccacctcagcctccttttcagaactacttctgtgtgatcagcaagccaaatgac
tgtatctttccttatgatttcaaggatgctgttgcaaaaaagaatgctaaaattgagatt
gctgcaacagaaagaacattgcttggtctgctattagcaaaaatacacaagattgaccca
gatgtcattgtaggccatgacatatatggctttgatttagaagttattcttcagagaatc
actgcttgcaaagtaccccactggtctaaaataggccgcttaagaagatccattatgcct
aaacttgggggccgaagtggctttgcagagaaaaatgcagcttgtggcagaatgatttgt
gatgtccagatttcggccaaagagctcattcgatgcaaaagctaccacttgtcggagctt
gttcttcatattataaaaacagaaagagttgtcatcccacctgaagccatcaaaaatcac
tataatgactcttcacatttgctatatttactggagaatacatggatggatgccaaattc
atcttgcagatcatgtgtgagctgaatgttcttcctttagctctacagataacaagcatt
tctggaaatgtcatgtcaaggacattgatgggtgggcgctctgaaagaaatgaatacctt
ttacttcatgctttctatgaaaaggactatattgtaccagataaacaactattcaaaaag
ccacagatagatcttgttgatgatgaagaggatgtggatgtgacacaaggcaagactaag
aaaggcaggaagaaagctgcttatgcagggggacttgtgttggagcccaaagttggattc
tatgacaagtttattctacttttggactttaatagcttatacccatctataatccaggag
tttaacatctgctttaccactgttgaaagggtttcagccatctccaggaaggcatccgag
gtggatgaagttgatgaaattccagagcttcctgatcctgaccttgaaattggtatttta
cctaaggagatcaaaaagctagtagagaggagacgacaagtcaaacagctaatgaagcag
ccagatttaaatgctgatctctatttgcagtatgacatccggcaaaaggccttgaagctt
acagctaacagcatgtatggttgcttgggattttcttttagtagattttatgctaaacct
ttggcagccctggtaacacataaaggacgagagatccttatgcacacaaaagatatggtt
atgaagatgaacctggaagtaatttatggtgacacagattctatcatgattaatacgaac
agcaataatctggaggaggtctttaagcttgggaacaaggtgaaaagtgaaatcaacaaa
ttgtataaactattggagattgacattgatggagtttttaaatcacttctgctgcttaag
aaaaagaaatatgctgccctagtggtagaacagactggtgatggccggtacataacaaaa
caggaactgaaaggactggatattgttcggagagactggtgcgacctggctaaagaatgt
ggaaactacgttatcagtcagattctttctgatcagccccgggatatcattgtggaaaac
attcagcggaggcttatagaaattggagaaaaagttgtgaatggtagcatccctcttaac
cagtttgaaattcacaaggccttgacaaaagatcctcaagattatcctgacaaaaaaagc
ttgccccatgtacatgtagctttgtgggtaaactctcaaggtggacgaaaggtgaaagct
ggtgataccatatcatatgtgatctgtcaggatgggacaaacctaagtgctagtcagaga
gcatatgccttagaccagctaacgaagcaggagaatctacgtattgataatcagtactac
ctttcccaacaaatacatcctgtggtgtctcgaatctgtgagccaattgaagggattgat
tctgtgcttattgctacctggctgggcttggacccatctcagtttcgctcccatcaacaa
taccagaaagatgaagaaaatgaggcactgcttggtgttcctgctcagctaactgatgaa
gaaaaatatcgtgattgtgaaagattcaagtttatctgttcccagtgcaaaacagagaac
atttatgacaatgtgtttgatggctctggaaaagtgattgagcctagtttaattcgctgc
agtaatatcacctgcgaagcttcaccattaagttttgtgactcagatgtgcaataaattg
attttggacatcagacggcatatcaaaatatattacatgggctggctagtttgtgaagag
cagacgtgtcagaaccgaacacgtcgaataccactcaacttttcccgttctggagccatg
tgccaagcatgcatgaaagcttcccttagacctgagtaccctgagaaagccttatatacc
cagctgtgcttttatcgtttcatttttgattgggattatgccatggaaaagattgtctcc
aaagatgagagagattacctaaatccgttatacaaagatgatgtcaaacatttatataag
aagctgaaggatgttgcagacaaagcagtatctgcaagtgggtactcggaagtcaacctc
agcaagttgttccagtcatttgttgcaatgaagtaa
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integrated database retrieval system
