Polypterus senegalus (gray bichir): 120523914
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Entry
120523914 CDS
T08668
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120523914 (ddx10)
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120523914 (ddx10)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
90S particles
Helicases
120523914 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
120523914
NCBI-ProteinID:
XP_039601552
LinkDB
All DBs
Position
2:275870546..276313570
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AA seq
869 aa
AA seq
DB search
MSAVTKPSKADTFQNKKKGFKAADKQDPVKNFEKWKKRYDHTKNKLKTARNQKKKKPEWQ
VERETINKLIQRYSEINPNEVLKFSDFPLSKKTVTGLLEAQYRTPTEIQKQTIGLALQGK
DILGAAKTGSGKTLAFLVPVLECLFRQQWTADDGLGALIISPTRELAYQTFEVLRKVGKN
HEFSAGLIIGGKDLKHEADRIHRTNIIICTPGRLLQHMDETMTFHALNLKMLVLDEADRI
LDMGFADAMNAIIENLPKTRQTLLFSATQTKSVKDLARLSLKDPSYVWVHEKAKFSTPAT
LEQSYVVCDLSQKVNMLFSFVKNHTNKKIIVFFASCKEVQYLFRAFCRLRPGISVLALHG
KQLQLKRMEVYNDFVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDASTYIHRVGRTA
RYKEGGEALLILTPSEEQGMLKQLEERKVPVSNIKVNPDKLINVQQKLEAFLAQEQELKE
RAQRCFVSYLRSVYLMKNKEVFDVFKLPLPEYAQSLGLAVAPRVRFIQRAKQQNDLSSVK
DKVTSEARTEDTESSTEEELENFKAVLRQQPLSVESKSEDEEVKEESQAKNEGECSWELK
DTQTAGLNIIGEEEEEDEEDDLKDLDLLTVKRKDVFGVETAVEKKPEDKATVKKKIEKAT
KFKAAKKILKRNFKVNTKLVFTEEGEMVQQWPPTQKSVVNDEEDDDATPGINMEKARERL
IEEDKFDKEEYRRKVKEKHREKRLKERAAKREAKQQQKKDEGEEEDDEEDIVYLNYDSEN
EFDPDTLPDPDKLKNSDQEDEDNNEDTMRSVPFKKEARKRNYTSDSDEEPVPQGKKKKNL
NDTLSKPLDTGLSLAEDEELVLHLLSSRT
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggtaactaaaccgagtaaagcggatacattccaaaataagaagaagggtttc
aaagctgcagacaagcaagatccagtaaaaaacttcgagaaatggaaaaaaagatacgac
cacaccaaaaacaaattgaaaactgcaaggaatcagaagaaaaagaaacccgagtggcaa
gtggagagagaaacgatcaacaaactgattcagcggtattctgagattaatcctaatgaa
gtgttgaagttttcagattttcctctgtcaaagaaaactgtgacaggattattggaagca
caatatcgaactcctacagaaattcaaaagcaaacaattggcttagcattacaggggaag
gatattttgggcgcggcaaagactggttctggcaaaacactcgcttttcttgtacctgta
ttggagtgcttgttccgtcagcagtggacagcagatgatggtctaggagctttaataatc
tctccaactagggagcttgcttatcagacctttgaagtgctgcgtaaagttgggaagaat
catgagttttcagctggacttatcattggtgggaaggatttaaagcatgaggctgaccgc
atccatcgtaccaatattatcatttgcaccccaggacgtcttctgcaacacatggacgaa
actatgactttccatgccttaaatctaaagatgctagttctggatgaagcagatagaatt
ttggacatgggatttgcagatgctatgaatgctatcattgagaacctgccaaagactcgt
cagaccctgctgttttcagctactcaaactaagtctgtgaaagatcttgcaaggctaagt
cttaaagatccatcctatgtctgggtacacgaaaaagccaagttcagcactcctgcaaca
ctagaacagagctatgttgtttgtgatctaagccagaaagtcaacatgctgttctccttt
gtgaaaaatcacactaacaagaagataattgttttttttgcaagctgcaaggaggtgcag
tatctgtttcgtgcattttgtcgtctccgtcctggaatatcagttcttgcattacatgga
aaacagctgcagcttaaaagaatggaagtgtacaatgattttgtccggaaaaaagctgct
gtgctgtttgctactgatatagcagccagaggccttgatttccctgcagtaaactgggtt
cttcagtttgattgtccagaggatgctagtacttacattcacagagtggggcgaacagcc
agatataaagagggtggtgaagctttgctgattttgacgccgtcagaagaacaagggatg
ctaaaacagcttgaagaaagaaaagttcctgtaagcaacataaaggtcaacccagataaa
ctcatcaacgtgcagcagaaactggaagctttcctagcacaagagcaggagctaaaggaa
cgtgcacaaaggtgttttgtgtcctatctgcgctctgtatatctcatgaagaacaaggag
gtttttgatgtgtttaagctgccattaccagagtacgcacaatcactaggattagcagtg
gctcccagggtccgattcattcagagagcaaaacaacaaaatgatctgagttctgtgaag
gataaagtaacatctgaggcaagaacagaagatacagaatctagcactgaggaagagctg
gagaactttaaagctgttctgaggcaacaacctctttcagttgaaagcaaatcagaggat
gaagaagttaaagaagagtcacaagccaaaaacgaaggggaatgttcttgggaattgaag
gatacacagactgcagggttaaacattattggagaagaggaagaggaagatgaagaagat
gatctaaaagatttagatttacttacagtaaagagaaaagatgtgttcggggttgaaact
gcagttgaaaagaaaccagaagacaaagccactgtaaaaaaaaaaattgaaaaagcaaca
aagtttaaagctgccaagaaaatcttgaagaggaatttcaaagtcaatacgaagttagtc
tttacagaagaaggagagatggtacagcaatggcccccaactcaaaaatcagttgtaaac
gatgaagaagatgatgatgccacccctggtataaatatggaaaaagcaagggagaggttg
attgaggaggacaagtttgataaagaagaatacagaagaaaagtcaaagaaaagcatcgg
gaaaaaagactaaaggaaagagcagccaagagagaagccaaacagcaacaaaaaaaagat
gagggtgaagaagaagatgatgaagaagatattgtgtatcttaattatgatagtgaaaat
gaatttgaccctgacactctaccagatccagataagttaaaaaattcagaccaagaagat
gaagataacaatgaagacacaatgaggagtgtaccatttaagaaagaagcacgcaaaaga
aattacaccagtgattcagatgaggaacctgtcccacaaggaaaaaagaagaagaatctt
aacgacacactttcaaagcccttagacactggcctgtcgctagcagaagatgaagagctg
gtgttgcatttgctcagcagcaggacctaa
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