Polypterus senegalus (gray bichir): 120523922
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Entry
120523922 CDS
T08668
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169 isoform X1
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120523922 (rnf169)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120523922 (rnf169)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120523922 (rnf169)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120523922 (rnf169)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
120523922 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
Prok-RING_4
zf-RING_4
zf-RING_5
zf-RING_10
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
120523922
NCBI-ProteinID:
XP_039601564
LinkDB
All DBs
Position
2:complement(277122650..277166155)
Genome browser
AA seq
684 aa
AA seq
DB search
MAALSSVESSVRPKAVRRGRRAGGAARELTLEEAICPVCLEIFLEPVTMPCRHSVCLPCF
QRTVELSSLRCPLCRLRVSSWARRRTRDRTLINAELWELVRRSHPERCRRRMEGQGGEAV
KEELIFRAPVHISKPGEMRQEYEKQIKKLEEEKQEDRASEELIQKILEDDRRHLDKVRYH
QILQRKEEWDYLQNSHEPVCVVLSDSENEEPVGGKGRHLSAFVRKVRSPSSSGKRLQRYD
IQRSQSCTDSEEVGKAKNRFPLHATPAAKSLVSFTPNSGILLSSENSRSFSAPNLTSDKR
NSWRSGSCGSGVVATPLLKTERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVVE
PTIVKSTPRNLTRSLQKHTSYEASPSILQKWRQIEQDRLSKRASSKGTTTSMPAEEFSKD
KHCTRESVSLLPDTEKQSVSGCVKLDNGLSKRSSNYSELLESHNLSCKGRQTQFCKTQRL
IIDHSAEGHANVLHNTEKDQLLVKFNPVQVTCESSFSHSGPQIPRSKRLDTKNLVLLTAE
DNSKNQSCEKDSHATLISRKLFDPVERTDYLDSSDVSNTKHKPTKRSQKTKHLEGGEKAK
RLRTSTREGVGSECQSNSFDGFWLQKEDEDRKLAIKLQQQFDLEYRTVERQKGTPDNYLL
RSWATSNSQLGHSPRRSGRNLKKT
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgagctccgtcgagtcctcggtcaggccgaaggccgtgaggcgaggacgt
agagccggcggcgccgcccgcgagctcacgctagaagaggcaatttgtccggtatgtctg
gagatattcctagagcccgtcaccatgccctgtaggcactcagtgtgtctaccatgcttt
cagcgtaccgtggagttaagcagcctacgctgcccactctgtcggctgcgggtgtccagc
tgggcgcggcggcggacccgggacaggactttaatcaatgccgagctttgggaactggtg
cgtcgcagccacccggagcgatgtcgtcggaggatggaaggccagggtggcgaggccgtt
aaagaagagcttatattccgtgcccctgtacacattagtaaacctggagagatgcggcaa
gaatatgaaaaacaaattaaaaagctggaggaagagaaacaagaagatcgtgcttcagaa
gaattgattcagaaaattctagaagatgacagaagacatttagataaagtacgttaccat
cagatcctgcaaagaaaggaggaatgggattatctccagaattcccatgagcctgtatgt
gtagttttatcagactctgagaatgaagaaccggttggtggaaaggggagacatctgtcc
gcttttgtgcgaaaagttagaagtccatcttcctctggcaaaagacttcagagatatgat
atccaaagaagtcagagctgcacagactcggaggaagtgggcaaagcaaagaatagattt
cctttacatgcaacacctgcagcaaagagtcttgtatcgtttacccccaacagtggcata
ttgttatcttctgaaaacagtcgttctttttctgcccctaacctgacttctgataagagg
aacagctggcgatctggtagttgtggttctggtgttgtggcaacacccctgcttaaaacg
gagagatccattagtccagaaagcaatgacagtatatctgaggagctaaatcacttcaaa
ccaattgtatgctctccttgcacccctccaaagagattgccagatgggagggtggtagag
ccaaccattgtaaagtcaaccccacgaaatcttactcgtagcttacagaagcacacaagt
tatgaagccagtccttccatacttcagaagtggagacagattgaacaggatcgtctcagt
aaaagggcctcctccaaagggacaacaaccagtatgccagctgaggaattttccaaggac
aaacattgcacaagggagtctgtctctttactgcccgatactgagaaacaaagtgtatca
ggttgcgttaaattagacaatggcctgtcaaagagaagcagtaattattctgaactgctt
gaaagccataatttgtcttgcaaaggtcgtcagacccagttttgtaaaacacaaagactt
ataattgatcactctgctgaaggccatgctaatgtattgcataacacagagaaagaccag
ttactggtgaagtttaatcccgttcaggtgacgtgtgaatcatctttctctcatagtggt
cctcagattccccgtagtaaacggttggataccaaaaatctagttctgctaacagctgaa
gacaattctaaaaatcaaagctgtgagaaagattctcatgcaactttaattagtcgcaaa
ctgtttgatccagttgaaagaacggattacttggatagttccgatgttagtaatacaaag
cacaaacctacaaaaagaagccaaaaaacaaagcacttagaaggaggagaaaaagcaaaa
agacttcgaacttccactcgtgaaggagttggctcagaatgtcagtcaaacagttttgat
ggattttggctgcaaaaagaggacgaagatcgcaaattggccataaagctacaacaacag
tttgatttagagtatagaactgttgaaagacagaaaggtactcctgacaattatttactc
cggtcttgggccacttccaacagccaattggggcactcccctcgacgatcaggaagaaat
ctaaagaagacttag
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