Polypterus senegalus (gray bichir): 120523933
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Entry
120523933 CDS
T08668
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120523933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120523933
Membrane trafficking [BR:
psex04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
120523933
Endosome - Golgi transport
Arf GTPase associated proteins
120523933
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120523933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_8
PH_6
Motif
Other DBs
NCBI-GeneID:
120523933
NCBI-ProteinID:
XP_039601580
LinkDB
All DBs
Position
2:complement(281347415..281739260)
Genome browser
AA seq
1488 aa
AA seq
DB search
MSSVDSLSTVSDWLVLLHLDQYIESFEKYGYVLVSDCKELTNDNLYNAGVVLPGHQKRIL
TSLQKIFRGESQSEKPVPMPRNIYRCLQPSNTSENIHSTEDPPQESGTPKLYETSLPPPI
PPRVTPNRPPIKFTSTPTMTNEPVKRPESLPVKVTYMEQEPTKQFVPSPVPEEFHLHEQC
LVEHVEIIVPPLPAKRYVASRDPQAPPPLPRRPPLSVPRVSQTMSSASPRQSPTDDSEET
NKLPEVPPRIRLPYQSTTLPSVPQQRPSTPQESRDSSECNEEMNPADDNLFDTLDMSDKQ
LPVPEVKKTRINSLYSDDEHLEDDNDSYETILNNCPSWQDYGLSTLSALTSSICNRSKED
NGVPSLLSQVIKVGWLYKNPPQGSYIYQKRWVKLEADYLKYFDNDKEVYSKRFIPTASIT
QINNVGDQKFEVVTGNRTFVFRAESDFDRNEWVSVLQQTIKDQKSSSSESIFQSSSTASE
EKQGYLELRGLRSKLYVVVSGDKVFLYKNMEDHRLGIGITAIEMNLGNVKDADRRAFDLT
TPYRIFCFVAESDQQKDEWMEAMCDAIAEALSNYEVAEKIWSVEFNCFCADCGAAKPEWA
SINLCVVICKRCAGEHRSLGPSISKVRSLKMDKKVWTEELIELFLVMGNQKSNEFWAANI
PPSEALSPASCSSDRRRFISAKYREGKYRRYHQLFGNQEALDKALCLNMQSNDVGETLAL
VFCGANVNCDTGDPIYPTPIDQAKSYNQILQVEFLTQNKSTEIPRSDIGSHMDRQYYVAP
PSITHSGFLYKTASMGKLVTDRKAKEEFSRRWCTLNDGVFSYYDSDKNSTPNGELRMREI
VCLSVSPPETHGYDYTFEIYTDSDRLYLFGIDKSDALREWVKSIVKSFIPSSAENLLNQD
FERIGRLQYKDGLNLQSPKEGWFSLAGSTLYACFEEGEEEEAIHLKKLQELSIQQENEVL
VLVERRRTLYIQGQRKLDFMGWCTAIQRAAGSSGDTLCQQQLTEADIPVVVDRCIDYITQ
SGLTSEGIYRKSGVNSKITALLDNFRRDARNVRLKEGEHQVDDVSNVLKRFFRDVEEGIF
TSDASPLWLSTPGIMDESQRILQYQSLFSSLPRVNKATLKAVVNHLYCVQRFSDMNQMNL
HNLAIVFGPTLFQTDGKDYNAGRVIEDLIAHYVPIFNVNEQQLKKQLDEITAIIKLRDIS
SSSSLPPAGDFICTVYLEEKKETAEQHVKIPATMTAAQLAFEILDRRKVPVKDKDYWCCF
EVNEKEETERPLHLLEKVLPIVHSLGTESYLVVKRNFSMEAMLIYLASKVDTSKHGMMKF
REERNLLGLTTGSFHDRYFILNSTSLKLYKEVRSRQRLQRPELQCSHRPEKEWSVKSLKV
YQGIKKKLRPPTCWGFTVVYENEKHEKQQWYLCCDTQAEMREWFATFMSIQHEGSVWPSD
SVKMRESRVPLDARLGNISLIPLRGSENEMRNSVAAFAADPLALFRNV
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagtggattctctctccacagtgtcggactggcttgtattgttgcatctagac
caatatattgaatcctttgaaaaatatggctatgtactggtctctgactgcaaggaactc
accaatgacaatctttacaatgctggagtagttcttccaggtcaccaaaaacggatctta
accagtcttcagaagatatttcgaggagagtcgcagagtgaaaagcctgttccaatgcca
aggaatatataccggtgccttcaacctagcaacacttctgaaaatatccattcaactgaa
gacccacctcaggaatctgggacccccaagttatatgaaaccagtttaccccctcctata
cctccaagggtgaccccaaatcgtccacctattaagtttacatccactcccacaatgaca
aatgaacctgtcaaacggccagaatctctccctgttaaagtcacgtatatggaacaggaa
cccacaaagcagtttgtgccttcaccagtacctgaagaatttcatcttcatgaacagtgt
ttggtggaacatgttgagataattgttccaccactaccagcaaaacgctatgttgcttct
agggaccctcaggcaccaccccctcttccaaggcgtcctcccctttcagttccaagggta
tctcagaccatgtcctcggcatcacctcgccagtcgcctacagatgactcagaggaaact
aataagctgccagaggtaccacccaggatcagactaccctatcaatcaactactttgcca
agtgttccgcaacaaagaccatctactcctcaagagtccagagatagctcagaatgtaat
gaagaaatgaatccagctgatgataatctatttgacaccttggacatgtctgataagcag
ttgccggtgcctgaagttaagaagacaagaataaatagcctatatagcgatgatgagcac
ttggaggatgacaatgacagttatgaaaccattttaaataattgtccatcatggcaggat
tatgggctaagcacactttcagctttgacaagcagcatatgtaatagatcaaaagaagac
aatggagtaccgtctttactttcacaagtcattaaagtgggctggctgtacaaaaatcca
ccacaaggctcttatatataccagaagcgatgggtaaaactggaggctgattatttgaaa
tattttgacaatgataaggaagtatattcaaagcgatttatcccaactgcttcaattaca
cagatcaataatgttggggatcagaagtttgaagtggtcactggcaacaggacttttgtt
tttcgtgcagagagtgacttcgatcgtaatgaatgggtgtcagtgctccagcagaccatt
aaagaccagaaatcatccagcagtgaatctatattccaatcatcatctacagcttcagaa
gagaagcaaggctaccttgaactaagaggattacgctccaaactctatgttgttgtttca
ggagataaagtctttctttacaagaatatggaggatcatcggctgggtattggtattact
gccatcgaaatgaacttgggtaatgtgaaagatgctgacagacgagcttttgacctcacc
actccatacaggattttttgctttgtggcagaatcagaccagcaaaaagatgagtggatg
gaggctatgtgtgatgctattgcagaggctttgtccaattatgaggtggcagaaaagatc
tggagtgtcgaattcaactgtttctgtgccgattgtggagctgctaagccagagtgggct
tctatcaacctttgtgtggtcatctgtaagagatgtgcaggggagcatagaagtctggga
cctagcatttcaaaagtgcggagtctgaagatggacaaaaaagtctggactgaagaacta
attgagctgtttctggttatgggtaatcaaaagtctaacgagttttgggcagctaatatt
ccccccagtgaagctttgtcaccggcaagctgcagcagtgatcgtcggagatttatcagt
gcaaagtacagagagggcaagtaccgtcgttaccaccaactctttgggaaccaggaagca
ctagacaaggccttgtgtttgaacatgcaatctaatgatgttggagaaacacttgcctta
gtattctgtggggcaaatgtgaactgcgacacaggagacccaatctacccaactcccatt
gaccaggccaagagctacaatcagatattacaagtcgagttcttgacgcagaacaagagc
acagaaattccgagatctgatataggaagtcacatggacaggcaatattatgtggctcca
ccttcaattacacacagtgggtttctttataagactgcatcgatgggaaagctagttaca
gaccggaaagctaaggaagaattcagccgacgttggtgcacattaaatgatggagttttc
agctactatgacagtgataaaaactccacacccaatggggaactcagaatgagggaaatt
gtttgcctttctgtcagccctccagagacacatggatatgactacacctttgaaatttac
actgactctgatcgactctacctgtttggaatagataaatcagatgctctcagagaatgg
gttaaatctattgtcaagtcgtttattccatccagtgcagagaacctgctcaatcaggat
tttgaacgcatcggtagacttcagtataaagacgggctgaatcttcaaagccccaaagaa
ggttggttttcacttgctggctcaacactgtatgcctgttttgaagaaggtgaagaagaa
gaagctatccaccttaaaaaattgcaagagctctcaatccaacaagaaaatgaggtcctt
gtactggtggaaagacgaagaacactatacatacaagggcagagaaagctggattttatg
ggatggtgtacagccatacaaagagcagctgggagctctggagataccctttgtcaacag
cagctcacagaagccgacattcccgttgtagttgatagatgcattgattacatcacgcag
tctggtctcacttctgaaggtatttaccgcaaaagtggtgtgaattctaagattacagct
ctactagataattttcggagagatgcacggaatgttcgcctgaaagaaggagagcatcaa
gtggatgatgtttccaatgtcctcaaaaggttttttcgtgatgtagaagagggtatattt
actagtgatgcttcacctttatggcttagcacaccaggcataatggatgagagccaaagg
atcctacagtaccagtcattgttcagtagcctaccacgagtcaacaaagccacattgaaa
gctgttgttaaccatctgtactgtgtccagcgattttcagatatgaaccaaatgaatctg
cacaacctggcaattgtatttgggcctacacttttccaaactgatggcaaggattacaat
gcagggcgcgtcattgaagatcttattgctcactatgtgccaatttttaatgtgaatgag
cagcagttgaagaaacagttggatgaaatcacagcaatcatcaaacttcgagacatcagt
tccagcagttctcttcctcctgctggtgattttatttgcacagtatacctcgaagagaag
aaggagacagcagagcaacatgtgaagatcccagccactatgacagcagcacaactagca
tttgagatattggaccgcaggaaagttcccgtaaaggacaaagactactggtgctgcttt
gaggtcaatgaaaaagaagaaacagaacggccactacacctcctagagaaggttttaccc
atcgtccattcattaggcactgaaagttacttggtggtgaaaagaaatttctccatggag
gctatgttgatctatttagccagtaaggtggatacttctaagcatggaatgatgaaattt
cgtgaggagaggaacttattaggtttgacaacaggtagttttcacgatcgctactttatc
ttgaacagcacatctttaaaactctacaaagaagtgcggagccgtcaaagactgcagaga
ccagaactgcagtgcagtcacagaccggagaaggagtggtcagtcaaatctcttaaagtg
tatcaggggatcaaaaagaaactgcgacctccaacatgctggggatttacagtggtatat
gagaatgaaaagcacgagaagcaacagtggtacttgtgctgtgatacccaggcagaaatg
agagagtggtttgctactttcatgagtatacagcatgaaggaagtgtgtggccctctgac
tccgttaaaatgagagaatcacgggttccccttgatgccaggttgggtaatatctcattg
atccccttaaggggcagtgagaatgagatgagaaacagcgttgctgcttttgctgctgac
ccgcttgctctctttcggaacgtatga
DBGET
integrated database retrieval system
