Polypterus senegalus (gray bichir): 120523949
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Entry
120523949 CDS
T08668
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120523949
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120523949
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
PKD_channel
Ank_4
ANK_LRRK2
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
120523949
NCBI-ProteinID:
XP_039601618
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Position
2:283017721..283063289
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AA seq
713 aa
AA seq
DB search
MEHLTQAQWREIMNRKMHFPPALISAIQDGNVDQASKLLQPNDGVLRQLDESEDRQWREA
LNLAIRLGNEDMFELLVRSVKFDFRQIHEALLVAVNTNQPRVVKRLLDRLDQEKGNNKVD
IRSFSLAFFDQSIDNSHFAPGVTPLTLACQKDLYQIVEMLTKKGHSIPRPHKISCSCLEC
RNGRQYDLLKFSLSRINTYRGIASRAYLSIASEDSMLSAFRLSRELKRLSKKEPEFKPQY
LELENICQEFAVELLGMCRNQSEVTTVLNNCGEDSDEELDEHGFEEGIPNLARLRLAVTL
NQKQFVAHPICQQVLSSIWCGNLSGWRGSHTLWKLLVSVGIFITMPLLCLIYWIAPRSKV
GQILKIPVIKFLLHSASYLWFLVILLLESIIMEKNRSTFSTRDEAILKNSFHMIWVLGFF
WFECKEVWIEGLRNYLFDWWNFLDIMTLSMYVASFTLRVLVVLKGYFLCLDKNTELECNY
FTKLDRQDWRTEDPQFIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRF
LFILMIIGTAFLCGINNIYVNYVDSPNLGQFNVTFRFLFWTMFGVADEKFVDMPDYALAQ
CVGQILYGIFTLMIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLCYFREGLTLP
VPFNIIPTPKAIFYLIRKIFRILCCCCQFDQKPDYPPIPSIVSKPFVDLIDDC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggagcatctcactcaagcgcaatggcgggagattatgaacagaaagatgcacttcccg
ccagctctaatcagtgctattcaagacgggaatgtcgaccaggcctccaagctgttacag
ccaaacgacggtgtcttgcgccagctggatgagtccgaagatcggcagtggcgtgaagct
ttaaatcttgcaatccgtttgggcaatgaagatatgtttgaactcctggtgcgttctgtc
aaatttgatttccgccaaatccatgaggccttactggtggctgtgaacactaaccagcct
cgagttgtaaagcgccttttagatcgtctggatcaggagaagggcaacaacaaagttgac
atccgctcattttcactggccttctttgaccaatctattgataattctcattttgcccct
ggtgtaactccactcacattagcctgtcagaaggacctttaccagattgtggaaatgctg
accaagaaaggccacagtattccccgaccacacaagatctcatgctcatgcctggagtgc
cgcaatggtcgccaatatgacttgctcaagttctcactgtccagaataaatacttacaga
ggcattgccagccgtgcctatctctctattgccagtgaggattccatgctaagtgccttt
cgacttagcagagaactcaaaaggctgtcgaagaaggaacctgaatttaagccacagtac
ctggaactggaaaacatttgtcaagaatttgctgtggaactcttaggaatgtgccgcaat
caaagtgaagtgacaactgttctcaacaactgtggtgaggatagtgatgaagagctggat
gagcatggatttgaggaaggcattccaaacttggcacggctgagattggcagtcacccta
aaccagaaacagtttgtggctcatcccatctgccagcaagtcctgtcctctatctggtgt
ggtaatttgtcaggatggcgtggaagccacaccctgtggaagcttctagtttccgtggga
attttcattacaatgcctttgctctgtctgatctactggattgcacccagatccaaggtt
ggacaaatcttaaaaataccagtaataaaatttctgctgcactcggcatcctacctttgg
tttcttgtcattttgcttttggaatccatcattatggagaaaaatcgaagtaccttttca
acacgtgatgaagccattttgaagaactctttccacatgatttgggtgttgggatttttc
tggtttgaatgcaaggaggtgtggattgaaggtttacgcaactacctctttgattggtgg
aatttcttggacataatgaccctcagtatgtacgtggcatcattcactttacgtgtccta
gtcgtcctcaaaggatatttcctctgccttgataagaacactgaacttgagtgtaattac
ttcactaaacttgatcgacaagattggcgaactgaagacccacagtttattgcagaggtg
cttttcgctgtgacaagtatgctgagcttcacacgactggcgtatattttgccagcacat
gaatctcttggaacactgcaaatttctattggaaagatgattgatgacatgatgaggttc
ctgttcatcttgatgatcattggcactgccttcctctgtgggatcaacaacatttatgtg
aattatgttgattctccaaaccttggacagtttaatgttacttttcgttttttattctgg
accatgtttggtgtagcagatgaaaagtttgtggatatgccggattatgcattagctcag
tgtgtgggccaaatactgtatggcatttttactttaatgattgtcattgtcttgctcaac
atgcttattgccatgatcaccaactccttccagaagattgaggatgatgctgatgtggag
tggaagtttgctcgttcaaagctttacctttgttacttcagggagggactaacgctgcct
gtccccttcaacattattcctaccccgaaggccatcttctacttaataaggaaaatcttc
agaatactctgctgctgctgtcagtttgaccaaaaacctgattacccgcctatcccttct
attgtgagtaagccctttgttgatttaatcgatgactgttaa
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