Polypterus senegalus (gray bichir): 120523960
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Entry
120523960 CDS
T08668
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04020
Calcium signaling pathway
psex04148
Efferocytosis
psex04218
Cellular senescence
psex04310
Wnt signaling pathway
psex04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120523960 (nfatc4)
04020 Calcium signaling pathway
120523960 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120523960 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
120523960 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120523960 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120523960 (nfatc4)
Transcription factors [BR:
psex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
120523960 (nfatc4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
120523960
NCBI-ProteinID:
XP_039601652
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All DBs
Position
1:32877751..33062716
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AA seq
1050 aa
AA seq
DB search
MGAAPGWEDGELEFKLVFEEDPPAVPGSGAGNSNCESGTEKRISADETHSPDGDTDECPS
PSFQEISPSTNQPMRTLHAKMGGMNCAANRAGMHSPPPRPALDKNFIGTYESQPARFIQL
GGSRILECPSIQITTISPENHYSEENEPYSGWERMSRDHLYLPLDPFAYRDAGSLSPSPA
SSLSSRSWISEASSCESLQLLCDEDELNEATSRFSLGSPIASPRPSSPRLLSYLLPTSPS
SRPTSPGGKRRYSSYSEGYSPLPSPSISRRGSFSEDPLSPDSLSDSSTAPDYGFPRISGG
VESDNIPQKTRKTSIDQSARKEEPVIFNSNGYQPIGPADDGFLHIRKENNQNHHSGMDYL
SVPSPLVWSKARISGHSPVFRSSALPPLDWPLPSQFDQYELRIEVQPRSHHRAHYETEGS
RGAVKASPGGHPIVKLSGYNEKPLSLQMFIGTADERSLRPHAFYQVHRITGKMVGTASQE
MVLAGTKVLEIPLHPENGMAANIDCAGILKLRNSDIELRKGETDIGRKNTRVKLVFRVHI
PQGGGKVVSVQTASIPIECSQRSAQELPVVESGSITSCSVEGGEELVLTGANFLPESKII
FLEKGPDGKLQWEEEAVVNREKSSESKLYVQIPAYCDRNARRPIQVCFYVFNGKRKRSPT
QCFRYLPAVFKGETSQEISMTGLLHSPVPDFNGTRGTPPVRLLDPGGFLSQIPPYPSNFH
SFPTSYRGQDDQQTQASYPLTNLGHSPTPMGNFSTKKWQDSGDAYAEGTEPTTFESLPVP
SGFETDSGIGLNDLLLPHLQKPSPSPTFTWLDTHYSSSSPSRTSSDHFIQDSTASHGSQP
MPKSYSDSSFQLNTSKEVYESGNHTYSVSEPEQPMDEGSLYHTNSINPVHFLHSLTDYAP
KPQDVSSIHPLHSQSNQEGHLPSYSPTSYNYTNSGMRLEIDNSPSSSNTNTETQIAPNST
RSSFPEKLEPGHFLSKGASAISVCNSMNLDSSAPHEGIDLPEEDLKTDMEGYHLPFQNIP
MQGITLEEVNEFIGENLNSFPETSLESREL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagcaccgggctgggaagacggagagctggaattcaaattggtatttgaagaa
gatccgccggccgttccagggtcgggcgctggcaatagcaattgtgagtccgggacagag
aagcgaatatccgcggacgagacgcatagcccagatggcgacaccgatgaatgtccctct
ccatcctttcaggagatttcaccttctacaaaccagccaatgagaaccctacatgcaaaa
atgggaggtatgaactgtgcagctaaccgtgcagggatgcactcacctccaccacgacca
gctctggacaagaacttcatcgggacgtacgaaagccagccagcaaggtttatacagcta
gggggctctcgaattctggaatgtcccagcatccaaatcaccacaatatcacctgaaaac
cattattctgaggaaaacgaaccatactcaggctgggagagaatgtcaagagatcatctt
taccttcctcttgatccatttgcatatcgagatgctggatccttaagccctagtcctgcc
agcagcttgtcatcacgtagctggatttctgaagcctccagctgtgaatctctgcaacta
ctatgtgatgaagatgaactgaatgaagctacatcaaggttttcgttgggatcacctatt
gcctcacccaggcctagctctccacggctgctttcttaccttctccccacctccccgagt
tcgaggcccacatctcctggaggcaaacgtagatattctagctactctgaaggttactcc
ccacttccttcaccctcaatttcaaggagaggaagtttctctgaggaccccttatctcct
gattccctatcggactcgtcaacagccccagactatgggtttccaagaatatctggtgga
gtagaatcagataatataccacaaaaaactaggaagacatccatagatcagtctgctagg
aaagaagaacctgtcatctttaacagtaatggatatcagcccattggaccagctgatgat
ggatttctccatatccggaaagaaaacaatcagaatcaccactctgggatggattactta
tctgttccgtcacctcttgtgtggtccaaggccaggatcagtggtcatagtccagtgttt
cggagttcggcgctacctccgctggactggccgttgccttcacaatttgaccagtatgaa
ctgagaattgaagtccagcctcgatcccatcatcgcgcccattatgagactgagggaagt
cgaggggccgttaaggcatctcctggtgggcaccccattgttaagctttcaggatacaat
gagaagccactctccctccagatgttcattggcacagcagatgaacgtagcctgcgcccg
cacgccttctaccaagtacatcgcatcacaggcaaaatggtgggcactgccagtcaggaa
atggttctggcaggtaccaaggttctggagataccactgcacccagaaaatggcatggca
gctaacatcgactgtgctgggattctgaagctccgcaactctgacatagagctacgcaag
ggtgaaactgatatcggtcgcaagaacacaagggtgaagctcgtgttcagggtccacatc
ccccaaggaggcggaaaagtggtgtctgtgcagactgcctccattcccattgagtgctct
cagcgctcggcccaggagctgccagttgtggagtccggcagcattacttcctgttcggtg
gaaggaggagaagagcttgtgctaactggtgccaacttccttccggaatcaaagatcatc
tttctggagaaggggccagatggaaagcttcaatgggaggaggaagccgtggtaaatcga
gagaaaagcagtgagtctaagctgtacgttcagatccctgcttattgtgacaggaatgcc
aggcgcccaatccaggtctgcttctatgtcttcaatggaaaaagaaagagaagcccaacc
cagtgcttcagatatcttccagcagtgtttaaaggagagacttcacaagagatctcaatg
acaggactcctgcactcccctgttccagattttaatggcaccagaggaacaccacctgtc
cgactgttggatcctggaggatttttgagccaaatacccccatatccatccaatttccat
agctttccaacatcttacagagggcaggatgatcagcaaacccaggctagttaccctctg
acaaatttggggcattcacctacaccgatgggaaacttttccacaaagaagtggcaggat
tcaggtgatgcatatgcagaaggaacagaaccaacaacatttgagtctctgcctgttcct
tccggctttgaaacagattctgggataggtttaaatgatttactgctgcctcatttgcaa
aaaccatcaccttctcctacatttacatggttagacacacattactcttcctcatcacca
tctcgaacctcatcagatcattttatccaagactcaacagcttctcatggctcccaacca
atgccaaagtcttacagtgattcttcatttcaactaaacacatccaaagaagtatatgaa
tctgggaaccatacctattctgtaagtgaaccagagcagccaatggacgaagggtctctg
tatcacacaaattcaatcaatcctgtccattttttgcactccttaacagattatgcaccg
aaacctcaagatgtttcatccatccatcctcttcattcccaatctaaccaagaaggacat
ctcccttcttattctccaacatcttataactacaccaactcaggaatgaggctagaaata
gataattctccttcttcatcaaacacaaatacagaaacacaaattgctccaaattctact
cggtcttcatttccagaaaaattagagccgggccattttctatccaagggtgcatcggct
attagtgtctgcaatagcatgaatctggactccagtgcaccacacgagggcattgacctc
ccagaagaagacctgaagacagatatggaaggctaccatcttcctttccaaaacattcca
atgcaaggcataactctggaggaagtcaatgaattcataggggaaaacctcaactcattt
cctgagacaagccttgaatcaagagaactctaa
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