Polypterus senegalus (gray bichir): 120523971
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Entry
120523971 CDS
T08668
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03410
Base excision repair
psex04140
Autophagy - animal
psex04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120523971
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120523971
09143 Cell growth and death
04217 Necroptosis
120523971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120523971
03400 DNA repair and recombination proteins [BR:
psex03400
]
120523971
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120523971
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
120523971
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120523971
MMR (mismatch excision repair)
Other MMR factors
120523971
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120523971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
120523971
NCBI-ProteinID:
XP_039601660
LinkDB
All DBs
Position
2:complement(287676601..287682196)
Genome browser
AA seq
211 aa
AA seq
DB search
MGRDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
DLAKQDKVRYEREMKTYVPPKGEKKKRTKDPNAPKRPPSAFFIFCSDYRPKIKAEAPGLS
IGDVAKKLGEMWNSTSAEDKQPYEKKAAKLKEKYEKDIAAYRAKGKPESAKKGPGKAEKT
KKKREEEEDEDDEEDEEEDEEEEEEEDEDDE
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagatcctaaaaagccaaggggcaaaatgtcctcgtatgcctactttgttcag
acttgcagagaggagcacaagaagaagcacccagatgcatctgtcaacttctctgagttt
tcaaagaaatgctcagaaaggtggaagacgatgtccgccaaggaaaaaggaaagtttgag
gatctagcgaaacaggacaaagtacgctatgaaagagagatgaagacttatgttccacca
aaaggtgaaaagaagaagagaactaaagatccaaatgcaccaaagaggcccccatctgct
ttttttatcttctgctctgactatcgtcctaaaattaaagcagaagccccaggcttgtcc
attggcgatgttgccaagaagctgggagagatgtggaacagcactagtgctgaagacaaa
cagccttatgaaaagaaagcagcaaaactgaaggaaaagtatgagaaggatattgctgcc
tatcgtgcaaagggcaaacctgaatctgctaagaagggacctggtaaggcagagaagacc
aagaaaaagagggaggaggaagaggatgaggacgatgaagaggacgaggaagaagatgag
gaggaagaagaggaggaagacgaggatgacgaatag
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integrated database retrieval system