KEGG   Polypterus senegalus (gray bichir): 120523971
Entry
120523971         CDS       T08668                                 
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03410  Base excision repair
psex04140  Autophagy - animal
psex04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120523971
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120523971
  09143 Cell growth and death
   04217 Necroptosis
    120523971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psex03036]
    120523971
   03400 DNA repair and recombination proteins [BR:psex03400]
    120523971
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psex04147]
    120523971
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    120523971
DNA repair and recombination proteins [BR:psex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120523971
   MMR (mismatch excision repair)
    Other MMR factors
     120523971
Exosome [BR:psex04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   120523971
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 CLEC16A_C
Other DBs
NCBI-GeneID: 120523971
NCBI-ProteinID: XP_039601660
LinkDB
Position
2:complement(287676601..287682196)
AA seq 211 aa
MGRDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
DLAKQDKVRYEREMKTYVPPKGEKKKRTKDPNAPKRPPSAFFIFCSDYRPKIKAEAPGLS
IGDVAKKLGEMWNSTSAEDKQPYEKKAAKLKEKYEKDIAAYRAKGKPESAKKGPGKAEKT
KKKREEEEDEDDEEDEEEDEEEEEEEDEDDE
NT seq 636 nt   +upstreamnt  +downstreamnt
atgggcagagatcctaaaaagccaaggggcaaaatgtcctcgtatgcctactttgttcag
acttgcagagaggagcacaagaagaagcacccagatgcatctgtcaacttctctgagttt
tcaaagaaatgctcagaaaggtggaagacgatgtccgccaaggaaaaaggaaagtttgag
gatctagcgaaacaggacaaagtacgctatgaaagagagatgaagacttatgttccacca
aaaggtgaaaagaagaagagaactaaagatccaaatgcaccaaagaggcccccatctgct
ttttttatcttctgctctgactatcgtcctaaaattaaagcagaagccccaggcttgtcc
attggcgatgttgccaagaagctgggagagatgtggaacagcactagtgctgaagacaaa
cagccttatgaaaagaaagcagcaaaactgaaggaaaagtatgagaaggatattgctgcc
tatcgtgcaaagggcaaacctgaatctgctaagaagggacctggtaaggcagagaagacc
aagaaaaagagggaggaggaagaggatgaggacgatgaagaggacgaggaagaagatgag
gaggaagaagaggaggaagacgaggatgacgaatag

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