Polypterus senegalus (gray bichir): 120524013
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Entry
120524013 CDS
T08668
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120524013 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120524013 (exosc8)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120524013 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120524013
NCBI-ProteinID:
XP_039601747
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All DBs
Position
2:295641138..295680843
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLDYHRKFLKENCRPDGRELGEFRTTTLNIGSITTADGSALVKLGNTTIIC
GIKGELAVPPADAPDKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIENSEMLQ
REDLCIEKGKLSWVLYCDIICLDYDGNILDACIIALLASIKNVQLPEVHINEQTGLAEVN
MKKKRHLNIVKHPVAASFAVFDNSILIVDPTSDEENLSTGFITVVIDEEEKLCTVHKPGG
TPLSNEKLQDCINRAITRNKEVCKLLNKVMKSMKAK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggatttaaaacagttgaacccttggactatcacagaaaatttctgaaagag
aactgtaggcctgatggaagagagttgggtgaatttcgaacaaccacattgaatattggt
tctattactaccgcagatggctcagcactagtaaagcttggtaatacaaccattatttgt
ggcataaaaggagagcttgcagtcccaccagcagatgcaccagacaaaggttacattgtg
cccaatgttgatctacccccactttgttcatcacggtttcggcctggacccccaggagag
caagcacaagctgctagtcaatttatagcagatgttattgagaattcagaaatgctacaa
agagaagatctttgtattgaaaaaggaaagctttcctgggtcctttactgtgacattatt
tgccttgattatgatggaaatattttggatgcttgcataatagctttactagcatctatc
aaaaatgtgcagctgccagaggtacacataaatgaacagacaggccttgcagaagttaac
atgaaaaagaagagacatttaaatattgtaaagcatccagttgctgcttcttttgcagta
tttgacaactcaattcttatagtcgatcctacttcagatgaagaaaacttgtcaactggg
tttattacagtggtaattgatgaagaggagaaactttgtactgtacacaaaccaggagga
actccactatcgaacgaaaaacttcaagactgcataaaccgagcaattaccagaaacaaa
gaagtctgcaaactcctgaacaaagtgatgaagagtatgaaagcaaaatga
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