Polypterus senegalus (gray bichir): 120524088
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Entry
120524088 CDS
T08668
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120524088 (stxbp5l)
Membrane trafficking [BR:
psex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120524088 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
120524088 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Synaptobrevin
Lgl_C
PEP5_VPS11_N
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
WD40_like
Motif
Other DBs
NCBI-GeneID:
120524088
NCBI-ProteinID:
XP_039601878
LinkDB
All DBs
Position
2:complement(319009198..319574749)
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AA seq
1262 aa
AA seq
DB search
MKKFNIWKVLDGFSASSPVSSGGAPVCPGGTIVASAGGVAAREIEIQETLTSELFQICKT
VRHGFPYQPTALTFDPVQKLLAIGTRTGGVRILGRPGVDCYCQHDSGASVLQLQFLINEG
ALVTACADDTLHLWNLRQKRPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNI
ESFVLSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGFETGTVVLWDLRCKRAD
FRTYYDEAIHSISWHHEGKQFMCSHSDGSLTMWNLKNPSRPFQITVPHGKSQRDGKKPEP
CKPILKVEYKTPKNSEPFIIFSGGLSYDKASRRPSLTIMHGKSITVLEMDHPIVEFLTLC
ETPYPNEFQEPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFADCPDL
IPALYSIGAKHKKQGYSNKEWPVSGGTWTLGSQTYSEIIITGHADGSIKFWDASAITLQM
LYKLKTSKVFEKPKGGEGKQSAEIVDEDPYAIQMVCWCPESRIFCIAGISAHVIIYRFSK
HEATMETASLEVRLQCEVEDIITPEAETISSFPDLTSQSSSVKCQSLTSSPNTITPEGIK
DSIPCLKVKARPVRMPPGYQAELVIQLVWTDGEPPQQVTSLALNSAYGLVAFGNCNGLAV
VDFIQKTVLLSMGTIDLYGSSDPYQRQPRSPRRSKQFPADNICMRGLSSFYSDSKKRIRT
SYQSLTELSDSPVSLELDRCKSPTSVPHSTASHNEIPSNVKAGHYSPVFYLLDNVKGPRK
LSLPTDLKTDLDHVNGHCTSPTSQPCSTGKRTPNTEGAKLNRRGPGRPPFRKAQSAACME
ISLPVSHPEVGYASRRAMLQQLHGVSIYSHDEHHAGSYSWTEKESRENSFSRSRSSSVSS
IDKESKEAITALYFMESYSRKNDGTLSPCLWVGTSLGMVLVISLTLPVTEEQRPTEPVVA
SPSGTVLTLKGAVLTFSSLDYNGALIHPPYEVWRDLNSSEDEKLRRRKLVNFSPSSSQDT
GDYQFAVVCSEKQAKVFALPSFTCLYVHSITEASFVLRADIVTFCNSVCLACFCANGHIM
ALSLPSLRPLLDINYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQDMCDNLQEM
LGEMFTPVETPEAQNRGFLKGLFGGSGQTFDREELFGEAAAGKASRSLAQHIPGPGGIEG
MKAAAGGVVGDLARARVALDERGQRLGELEDRTAAMMSSAEAFSKHAHELMLKYKDKKWY
QF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatatttggaaggtattagacggcttctctgcctcgtctccagtcagc
tccgggggagctccagtatgcccaggtgggaccatcgtagcctctgcaggaggagtagct
gctcgagagatcgaaatccaagagaccctcacttcggagcttttccagatctgtaagacg
gtacgccacggattcccatatcagcccactgccctgacatttgacccggtgcagaagctt
ctggccattggaacgaggaccggaggagtgcggatattgggcagacctggcgtcgactgc
tactgccagcatgacagcggagcgagtgtcctgcagctccagtttctaatcaatgagggg
gcccttgttaccgcctgcgctgacgacactcttcacctttggaaccttcgacaaaagcgc
cctgcagtcctgcattcactcaaattcaacagagagcggatcaccttctgtcatctcccg
ttccagagcaaatggctgtatgtgggcacagaaaggggaaacacgcacatcgtgaacatc
gagtcctttgtcctctcaggatacgtcatcatgtggaataaggcaatagaactatcaact
aagacacatcctggccccgtagtgcacttaagtgacagcccgagggacgaggggaagttg
ttaatcggctttgaaacgggaactgtggttttgtgggacctccgatgcaagcgggctgac
ttcagaacctactatgatgaggccattcactctatcagctggcaccacgaaggaaagcag
ttcatgtgcagccactcggacggaagcctgacgatgtggaacttgaaaaaccccagcaga
ccgttccagatcactgtgccacacggaaaaagccagcgagatggaaagaaacccgaaccg
tgcaagccgatacttaaggtggagtacaaaacgcccaaaaacagtgagccctttatcatc
ttctccggaggcctgtcgtacgataaggcgagcagaaggcccagcctgacaatcatgcat
ggcaaatccattacggtgctggaaatggaccaccccatcgtggagtttttgacgctctgt
gagacgccgtatccaaatgaatttcaggagccttacgctgtggtggtgctgcttgagaag
gacttcattgttgtggacctcacacaaagcaacttccccatctttgaaaatccgtatcct
atggatatccatgaatctccagtgacctgcacagcctacttcgccgactgtccggatctc
attccggctctttactcgatcggcgccaagcataaaaagcaaggctacagcaataaggaa
tggccggtgagtggtggcacttggacgcttggatcccagacgtattctgaaatcataatc
acgggacatgccgatggatcgataaaattttgggatgcgtctgccatcaccctgcagatg
ctctacaagctgaagacctccaaagtctttgaaaagcccaaaggcggagaggggaagcag
agcgccgagattgtcgatgaagacccctacgccatccagatggtctgctggtgccccgaa
agcagaatcttctgcattgcaggcatctccgctcacgtcatcatttacaggtttagcaaa
cacgaagccaccatggagacagcgtccctcgaggtgagactccagtgtgaagtagaagac
atcatcactccggaggccgagacgatctcttcatttcctgacttgacatcccagtcatcc
tctgtaaaatgccaaagcctcacaagcagccccaacaccatcaccccagagggcataaag
gacagcatcccctgcctcaaagtgaaggcccggccagtccgaatgccaccggggtaccag
gctgaactggtcattcaactggtctggactgacggagagccgccgcagcaagtcaccagc
ctggctttaaactcggcttatggcttggtggccttcggaaactgcaacggtctggccgtg
gtggatttcattcagaagacggtgctcctcagcatgggcaccattgacctttatggctcc
agtgacccctaccagcggcagcctcgctcgccacgcagaagcaagcagttcccagcagac
aacatttgcatgcgtggcctgtctagcttttattcagattcaaagaaaaggatccgtaca
tcgtaccagagcctgactgagctctccgacagccctgtgtctttggagctggaccgctgc
aaatcccccacatcagttcctcactccactgcctctcataatgaaattccgagtaatgtg
aaagccggtcactacagtccagttttttacttgctggacaatgttaaaggaccaagaaag
ttaagtctgccgacagatcttaagactgatcttgatcacgtgaacggccattgcaccagt
cccacctcccagccctgcagcaccggaaagcgcacccccaacacggagggagccaagctg
aaccgacgaggacccgggcggccaccattccgcaaagcgcagtcagcggcttgtatggag
atctctttgcccgtctcccatccagaagtaggctacgcttccagacgggcaatgcttcag
caattacacggagtcagtatttactcgcacgacgaacaccatgccggcagttactcatgg
acggagaaagaaagccgagaaaactccttcagccgctcccgcagctccagcgtgtccagc
atcgacaaggagtccaaggaagccatcacggccctctactttatggagtcctacagccgc
aagaacgacggcacactgtcaccgtgcctttgggtcgggaccagcctggggatggtcctc
gtcatctccttgaccttgccggtgaccgaagaacagaggcccaccgagcccgtcgtggcg
tcgcccagcggtacggtgctgacacttaaaggagcagtgctgacgttttcctccttggac
tacaatggcgcgctgattcatcccccttatgaagtgtggcgggatcttaacagctcggag
gacgaaaagcttcgccgccggaaactcgtcaatttctcaccatcttcgtctcaggatacg
ggggattatcagtttgcggtggtctgttcagagaaacaagccaaagtttttgccctgcct
tccttcacatgtctgtacgtgcacagcatcacggaggcctcgttcgtcctgagggccgac
atcgtcacgttttgcaatagcgtctgcctggcttgcttctgcgcaaatggacacatcatg
gctctaagcctgcccagtctccggccattgctggatatcaactacttgcctttgaccgac
atgaggatcgcacgcaccttctgcttcacgaacggaggacaagcgctgtacctgagctct
ccaacagagatccagcgcatcacatacagccaggacatgtgtgataacctgcaggaaatg
ctgggggagatgttcacacccgtagaaacccccgaggcccagaaccgaggatttctcaaa
ggactctttggaggaagtggacagacgtttgacagggaagaactcttcggtgaagccgct
gccgggaaggcctcacggagtctcgctcagcatattccaggcccaggagggatagaaggc
atgaaggcggctgccggtggggtggtgggtgatttggcccgagctcgagttgcactggac
gagaggggacagagactgggagaactcgaagatcgcacagccgctatgatgtcgagtgca
gaggccttctctaagcatgcccatgagctaatgctgaagtacaaggacaagaagtggtac
cagttctga
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integrated database retrieval system
