Polypterus senegalus (gray bichir): 120524092
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Entry
120524092 CDS
T08668
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03420
Nucleotide excision repair
psex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120524092 (ercc1)
03460 Fanconi anemia pathway
120524092 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120524092 (ercc1)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
120524092 (ercc1)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
CRISPR_Cas6_N
Motif
Other DBs
NCBI-GeneID:
120524092
NCBI-ProteinID:
XP_039601893
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Position
2:complement(319910442..319959228)
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AA seq
364 aa
AA seq
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MEKKRFNINLEDSIFNKEPTTVKPLFKFSVDSDAKATQPKPDSDSRPLSYSEFIIKQKAS
SSSGKTDWVSPKKEAKSRDANHPVCASKSEPEEETKCPKNDVSAGIEKPAGALLENQGSN
WDEEQLVGNLQTGNADTENEGVPSAVCAPKPPGSGNSIIVSLRQRGNPILKFVRNVPWEF
GDIIPDYVLGQTTCALFLSLRYHNLNPNYIHDRLKQLGKAFTLRVLLVQVDVKDPHHCLK
ELARICLLADCTLILAWSPEEAGRYLETYKSYEKKPADLLMERVEQDFLSKVTDCLTTVK
SVNKTDTVTLLSTFSSLKRIMTASKEELTLCPGLGPQKARRLHDVFNQPFLKSRKQKTEE
KTQA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaagaggtttaacattaatttggaagattctatatttaataaagagccgaca
acggtgaagccattgttcaaattctccgtggacagcgatgctaaagctacacaaccaaag
cccgattcggattctcgccccctctcctatagcgagttcatcattaaacagaaggcctcc
tcctcttcaggtaaaactgactgggtgtccccaaaaaaagaggccaagagcagagacgct
aaccacccggtctgcgcctcaaaatccgaacccgaagaggaaaccaaatgtccaaagaac
gacgtctccgccggcatcgagaaacccgcaggtgctttgttggaaaaccaggggtcaaac
tgggatgaagagcagctggtgggaaatttacaaacgggaaacgcggacacggaaaatgaa
ggcgtcccctccgccgtttgtgcccctaaaccacctgggagtggaaacagcatcatcgtc
agtctgagacagagaggcaacccaattttgaagtttgtacgaaatgtgccctgggagttt
ggtgatatcattccagattacgtcttgggacagacaacatgcgctcttttcctcagtctt
cgatatcataacttgaatcccaactacattcacgatcgtctgaaacaacttgggaaggcg
tttactctgagggtgctgctggttcaagtggatgtgaaagatccccatcactgtttgaag
gagctggccagaatttgtctattggcagactgcacactcatactggcttggagccctgaa
gaagcaggcaggtatcttgagacctacaagtcttatgaaaaaaaacctgccgacctccta
atggagagagttgagcaagattttttatctaaggtaactgattgtttaaccacagttaag
tctgtgaacaagactgacacggtcactctgctatcaacattctcgtccttgaaaagaatc
atgactgcatctaaagaagaactgaccctctgcccaggactcggaccacagaaggctcgc
aggctccatgatgtctttaatcagccgtttctcaaatccagaaagcagaagactgaagaa
aagacgcaagcataa
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