Polypterus senegalus (gray bichir): 120524459
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Entry
120524459 CDS
T08668
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120524459 (pcdh8)
Cell adhesion molecules [BR:
psex04515
]
Cadherins
Protocadherins
120524459 (pcdh8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
120524459
NCBI-ProteinID:
XP_039602246
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Position
2:216304167..216310077
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AA seq
949 aa
AA seq
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MLLNGFAVVCRTVQYTAYEEDAPGTEIGNLARDLNINPADDPQTSFRFMERPNSTCISLK
EANGLLTIGERIDREEICKQASQCRITFDIISFSMEKYQLIHVEVEVKDINDHSPQFVHN
ESYIEISESSLVGSRFPLEVAVDWDVGPYYIQTYHISYDSHFGIEVHSREDGVKYAELVL
AKPLDREVEDSYTLQLVATDGGNPPRSGAVTVNIKVTDYNDNSPSFENNVVTVELNEDAP
VGFLLLTLNAVDPDEGVNGEVLYGFGSQVSSEILQTFQLDPSSGRLSLKALVDFEKRTNY
ELLIQAYDLGLNSIPTTCKVLVEVLDVNDNAPEINIKPMTSTSAGVAYITEAAAKDSFVA
LISTSDRDSGANGYVKCSIYGHEHFKLQQAYEDSYMIVTTATLDREKIPEYNLTVTAEDL
GSPPFKTIKQYTIRVSDENDSPPLFSKSVYEVSVVENNVPGSYITTVVARDPDLGHNSKV
TYKILSSETNGPPLSSFVSIDPATGSIYSVRSFNYEMIKQIEMKVRASDSGTPQLSSTAT
IRLKIVDQNDNFPFITNPILMNGSADLRLPNNAPPGYLVVHLKARDLDDGVNSELSYKIL
QDRENMFTLNKQTGEISLKHGLSYVTGDVLRLTVAVNDNGRPSLSSTAVLNFIVTETYPD
DELVIILPSSEEQPEWDVSLIVIIMLGGGCALLLVAIIAVAISCKRHRTHKTGKSDIVEG
QSSVCSTRYLRDLNRGLGDLREAETLFESQKAQEANKKVFIPGNPFSETDLQKIRTWQEE
KYLDLSCVTNADQLSTKDSGQGDSDFNDSDSDISGDGSKKIPTSFNAVHNGTFHSAQSGI
KFCMIPIDGPPSYGNGYSIAYSQTSVYNPKTEFRRAAYQTGHHPWRDTSYRTNLPKTKGL
LQAIPRTGPVPALQLCYENQTEMTQTERAPQLEKETQETSAVLHVATSF
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgaacggttttgcagttgtgtgtagaactgtgcagtatacagcttacgaagaa
gatgctccaggcaccgaaattggaaatttagccagagatctgaacattaatcccgcagac
gacccgcaaacaagttttcgttttatggagcggccgaactcaacctgtattagtctgaag
gaagcaaatggactgctgactatcggagaacgaatcgaccgagaagagatatgtaagcaa
gcctctcagtgccggataacctttgacattatcagcttttctatggagaagtaccagttg
attcacgtagaggtagaagtcaaggacataaatgaccattcaccccaattcgtgcacaat
gagagctatattgagatttccgaaagctcacttgttggcagtcgttttcctttagaagta
gcagttgactgggatgttggcccttactacattcagacttaccatatttcttacgacagt
cactttggcattgaagtgcacagcagagaagatggagttaaatatgctgaactggtctta
gccaagccgttagatagggaggtcgaagactcctatactcttcagctggttgctacagat
ggagggaatccacccagatccggcgccgttactgtcaacattaaagtgactgattataac
gataacagcccaagctttgagaacaatgtggtgacagtggagttgaacgaggatgcccca
gtaggctttctgctgctaacactcaacgctgtggatccagatgaaggtgtcaacggtgaa
gttctttacgggtttggatcgcaagtctcctctgagatacttcagacttttcaactggat
ccttcgtcagggcgtttgagcttaaaagcgctcgttgacttcgagaaaagaacaaattac
gaattactaatccaagcatatgatttgggattgaactccattccgacaacttgcaaagtt
ctcgttgaggtgttggacgtcaatgacaatgcgcctgaaattaacatcaaaccgatgact
tctaccagtgctggagtggcgtatataactgaagcagcggccaaagacagcttcgtggca
ctaatcagcacttcggacagagactcgggcgctaatggttatgttaaatgcagcatttac
ggccacgagcatttcaagttacaacaggcctatgaggacagctacatgattgtgacaaca
gcgactttggatcgggaaaagatacccgaatacaatctcaccgtgacggccgaagatctg
ggctctccgccatttaaaacaattaaacaatacaccattcgtgtcagcgatgaaaatgac
agccccccactctttagtaagtctgtttacgaggtctcagtcgttgaaaataatgtgcca
gggtcgtacattacgacggtggttgcccgtgatccggatttgggtcataactctaaagtt
acatacaagatactcagttcggagacgaacggacctcccctgtcatcattcgtgtccatt
gatccagctacaggctctatatattctgtaagatcattcaattacgagatgattaagcag
attgaaatgaaggtaagggccagtgattcgggaaccccacaactctcaagtacagccaca
atccgattgaaaatagtggaccagaacgacaactttcctttcatcactaatccaatttta
atgaacggctctgctgacctgcgcttgcctaacaacgccccaccaggttacctcgtcgtg
cacctcaaagcaagggatctggacgacggggtcaactcagaattatcttataaaatattg
caagaccgggaaaatatgttcactcttaacaaacagactggagaaatatctttgaagcac
ggtctaagctatgttacgggggatgtgttaaggctgacagtagcggtgaatgataacgga
cgcccttctctctcttccaccgctgttcttaacttcatagtgaccgagacgtatcccgat
gacgagcttgtcattattttaccatcgagtgaagaacagcctgagtgggacgtctccctt
atcgtaattatcatgctcggtggggggtgcgcattgttgcttgtggcaatcatcgcagtc
gcaatctcctgcaaaaggcatcggacacacaaaaccgggaaaagcgacattgtagaagga
cagtcgtcggtctgcagcacaagatacctacgggacttaaacagaggtctgggagacctg
agagaggcggaaaccttgtttgaaagtcaaaaggcgcaggaagcaaacaaaaaggtgttc
attcctggtaacccattttctgaaactgatctacaaaaaatacgtacatggcaagaagaa
aaatatttagatttaagctgtgttacgaatgctgatcaactgagcacaaaggacagtggt
caaggagacagtgattttaatgacagtgattctgatatcagcggagatgggtccaagaaa
atccccacctccttcaatgcagttcataatggcacattccattcagcacaatctggaatc
aaattttgtatgattcccattgatggacctccatcgtatggaaatggttacagcattgca
tactcccaaacatctgtttataatcccaagacagaattcaggagagcggcttatcagaca
ggtcaccatccatggagagatacttcctaccgtacaaacctgcccaagaccaaaggttta
ctgcaagctattccaagaactggccctgtgcctgctcttcagctgtgctatgagaatcag
actgaaatgacgcagacagagagggcacctcaacttgaaaaagagacacaggaaacgtca
gctgtactccatgttgccacttcattttag
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