Polypterus senegalus (gray bichir): 120524563
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Entry
120524563 CDS
T08668
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120524563
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120524563
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
COMP
GrpE
Motif
Other DBs
NCBI-GeneID:
120524563
NCBI-ProteinID:
XP_039602329
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Position
2:282934594..283000709
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AA seq
1273 aa
AA seq
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MAPIKIKHVVSFSSQDPKYCVENIFCSDATRPWLCSPKDHTGILKVELQLEKVSAIGYID
IGNCGSALIQVDVGRSSWPHDVPYEALLATASLMSPVESRQGINRTGVRMFKSGDFLSQA
RNELWDRVRVTCSQPFNKHTQFGLSFLRICTPEDESEHSVVTETQIVQEKSKSNDLRKQA
QDWLSSPTVQKIFNGQMQMKCSSEATQTNLLSMDSTSNCCMKDLAFLSRTARMVISARQS
QLPNRRMSGAESFHCEESNATDQVKCEKDNSAGCKNKQVNKKKKTGDGVLRSSCHKRLYK
GQRNLVNISSSRQHTRRNSPSLPDDKEEAPLECCPICGGHVSFEYLPLHASSCNGAGDMG
IPDLEQDCHFPSSSEERVQCPVCGFRFPLSEIERHASGCGEPNSSSWIFVDQAQWREIMN
RKMHFPPALISAIQDGNVNQASKLLQPNDGILRQLDDSEDRQWREALNLAIRLGIEDMFD
LLLRCVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNNKVDIRSFSLAFFDQSID
NSHFAPGVTPLTLACQKDLYQIVEMLTKKGHSIPRPHKISCSCLECRNGRQYDLLKFSLS
RINTYRGIASRAYLSIASEDSMLSAFRLSRELKRLSKKEPEFKPQYLELENLCQEYAVEL
LGMCRNQSEVTTVLNNCEDSDEELDEHGFEEGIPNLARLRLAVTLNQKQFVAHPICQQVL
SSIWCGNLSGWRGSHTLWKLLVSVGIFITMPLLCLIYWIAPKSKVGQILKIPVIKFLLHS
ASYLWFLIILLLESIIMEKNQSTFSTRDEAILKNSFHMIWVLGFFWYECKEVWIEGLRSY
LLDWWNFLDIMTLSMYVASFTLRVLVVLKGYFFCLDKNTELECNYFTKLDRQDWRTEDPQ
FIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFLFILMIIGTAFLCGI
NNIYVNYVDSPHLGQFNVTFRFLFWTMFGVADESFVDMQEYAVAQCVGQILYGIFTLMIV
IVLLNMLVAMITNSFQKIEDDADVEWKFARSKLYLCYFREGLTLPVPFNIIPTPKAIFYL
IRKIFRTLCCCCKFDRKPDYPPITSISNTALQSKGGDDRTSYRMQVIKALVQRYIETACR
EFEEARRKDVGNRITELNKVVGRLHAEMKNMRKNMRNETNSAPDTEGSSILGKYILGAKN
KFRGFDEESLGSGDGSVKVTVHFKSKTEEEEDDEAVTSPTDSKASDDTDTGFGSQVGEDS
IDGGEEVLEPTPE
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattaaaattaaacacgtagtatctttcagttcgcaggaccctaagtactgt
gtggaaaacattttctgtagcgatgccacgaggccctggctttgttctcctaaggaccac
actggtatattaaaggttgaactgcaactggagaaggtctctgctattggatatatagat
atagggaattgtgggtctgccttgattcaagttgatgttggtcgttcttcatggccgcat
gacgtaccatatgaggcgctactggctactgcaagcttgatgtcccctgtagaatcccgg
cagggtataaaccgaacaggtgtacgtatgttcaaatcaggagattttctcagtcaagct
cgtaatgaactctgggaccgtgtgcgagtgacctgcagccagcctttcaacaaacatact
cagtttggcctgtcttttctaaggatttgcactccagaagatgagagtgaacattctgtg
gtcacagagactcagattgttcaagagaaaagcaagtctaatgatctaagaaaacaagcc
caagattggttgtcaagtcctactgttcaaaagatttttaatggacagatgcagatgaaa
tgttcttcagaagcaactcaaacaaacttgctgagcatggattccacatctaactgttgt
atgaaagatcttgccttcctgagccgaacagcaaggatggtgatttctgctagacagtct
cagttacctaaccggaggatgtccggcgctgaatcttttcactgtgaagagagcaatgca
accgatcaagttaagtgtgaaaaagataattcagctggctgcaagaataagcaggtgaat
aagaagaaaaaaactggagacggtgttttaaggtcatcctgtcataagaggctgtataaa
ggacaaagaaatctagtaaatatttcatcatctaggcagcatacaagaaggaattctccc
agcttacctgatgataaggaagaagcccctcttgaatgttgtcccatttgcggaggtcat
gtcagttttgaatacctaccgttacatgcttcttcgtgtaatggtgcaggagacatgggc
attccagatttggaacaagactgtcattttccttcaagctcagaagagcgggtgcagtgt
cctgtttgtggattccgctttcccttatctgaaattgagcgacatgccagtggctgtgga
gaaccaaattcttctagctggatttttgtggaccaagcacaatggcgggagattatgaac
agaaagatgcacttcccgccagctctaatcagtgctattcaagatgggaatgtcaaccag
gcctccaagctgttgcagccaaacgacggtatcttgcgccagctggatgactcagaagat
cggcagtggcgtgaagctttaaatcttgcaatccgtttgggcattgaagatatgtttgat
ctcctgctgcgttgtgtcaaatttgatttccgccaaatccatgaggccctactggtggct
gtggacactaaccagcctcgagtagtaaagcgccttttagatcgtctggatcaggagaag
ggcaacaacaaagttgacatccgctcattttcactggccttctttgaccaatctattgat
aattctcattttgcccctggtgtaactccactcacattagcctgtcagaaagacctttac
cagattgtggaaatgctgaccaaaaaaggccacagtattccccgaccacacaagatctca
tgctcatgcctggagtgccgcaatggtcgccaatatgacttgctcaagttctcactgtcc
agaataaatacttacagaggcattgccagccgtgcctatctctctattgccagtgaggat
tccatgctaagtgcctttcgacttagcagagaactcaaaaggctgtcgaagaaggaacct
gaatttaagccacagtacctggaactggaaaacctttgtcaagaatatgctgtggaactc
ttaggaatgtgccgcaatcaaagtgaagtgacaactgttctcaacaactgtgaggatagt
gatgaagagctggatgagcatggatttgaggaaggcattccaaacttggcacggctgaga
ttggcagtcaccctaaaccagaaacagtttgtggctcatcccatctgccagcaagtcctg
tcctctatatggtgtggtaatttgtcaggatggcgtggaagccacactctgtggaagctg
ctagtttccgtgggaattttcattacgatgcctttgctctgtctgatctactggattgca
cccaaatccaaggttggacaaatcttaaaaataccggtaataaaatttctgctccactct
gcctcctacctttggtttcttatcattttgcttttggaatccattattatggagaaaaat
caaagtaccttttcaacacgtgatgaagccattttgaagaactctttccacatgatttgg
gtattgggatttttctggtatgaatgcaaggaggtgtggattgagggtttacgtagctac
ctcttggactggtggaatttcttggacataatgaccctcagtatgtacgtggcatcattc
actttacgtgtcctagtcgtcctcaaaggatatttcttctgccttgataagaacactgaa
cttgagtgtaattacttcactaaacttgatcgacaagattggcgaactgaagacccacag
tttattgcagaggtgcttttcgctgtgacaagtatgctgagctttacacgactggcgtat
attttgccagcacatgaatctcttggaacactgcaaatttctattggaaagatgattgat
gacatgatgaggttcctgttcatcttgatgatcattggcactgccttcctctgtgggatc
aacaacatttatgtgaattatgttgattctccacaccttggacagtttaatgttactttt
cggtttttattctggaccatgtttggtgtagcagatgaaagctttgtggatatgcaggag
tatgcagtagctcagtgtgtgggccaaatactgtatggcatttttactttaatgattgtc
attgtcttgctcaacatgcttgttgccatgatcactaactcctttcagaagattgaggat
gatgctgatgtggagtggaagtttgctcgttcaaagctttacctttgctacttcagggag
ggactaacactgcctgtcccctttaacattattcctaccccgaaggccatcttctactta
ataaggaaaatattcagaacactctgctgctgctgtaaatttgaccgaaagcctgattac
ccgcctataacttctatttcaaatacagctttgcaaagtaaaggtggagacgacagaaca
tcttaccgaatgcaggtgatcaaggctctggtgcagcgatacattgagacagcctgcagg
gaatttgaagaagcaaggagaaaagatgtgggcaatcgaatcacagagctgaataaagta
gtggggcgcttacatgcagagatgaagaacatgcgaaagaacatgaggaacgagaccaat
tctgctccagatacagaaggatctagcatccttgggaagtatattctaggagctaagaat
aaattccgaggctttgatgaagagtcactcgggtcaggagatggatcagtgaaggtcacc
gtgcacttcaagagtaaaacagaagaggaggaagatgatgaagccgtgacctctccaaca
gacagcaaggcttctgatgacacagacactggatttggctctcaagtcggggaggactcc
atcgatgggggagaagaagtacttgagccaacaccagagtga
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