Polypterus senegalus (gray bichir): 120524806
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Entry
120524806 CDS
T08668
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00260
Glycine, serine and threonine metabolism
psex00630
Glyoxylate and dicarboxylate metabolism
psex00670
One carbon pool by folate
psex01100
Metabolic pathways
psex01200
Carbon metabolism
psex01230
Biosynthesis of amino acids
psex01240
Biosynthesis of cofactors
psex04981
Folate transport and metabolism
Module
psex_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120524806 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120524806 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120524806 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120524806 (shmt2)
Enzymes [BR:
psex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
120524806 (shmt2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
120524806
NCBI-ProteinID:
XP_039602494
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Position
3:complement(10412384..10430299)
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AA seq
498 aa
AA seq
DB search
MMLAFGLRQLSRPLVCGGVRGQCARLASSHASDFSRWTGQESLAEDDAEMWRLVQLEKDR
QCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIEVLCQKRALEA
FDLDPELWGVNVQPYSGSPANFAAYTALLQPHERIMGLDLPDGGHLTHGYMSDIKRISAT
SIFFESMPYKLNPQTGLIDYQQLEATARLFRPRLVIAGTSAYARLIDYARMKEICTEVRA
HLLADMAHISGLVAAKVIPSPFEYADLVTSTTHKTLRGARAGLIFYRKGVKSVDKKTGKE
LRYDFEDRINFAVFPSLQGGPHNHAIAAVAVALKQASLPAFKQYATQVLKNSKAMAGALL
KKGYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELMSITANKNTCPGDKSALTPGGLRL
GAPALTSRHFKEADFEKVVDFIDEGIKIALDVKKKTTKLQDFKSFLLTDEETKARVAEVR
HRVESFARVFPMPGFEER
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggcttttggtcttcggcagttgtctcggcccctggtatgcggtggggtgcga
gggcagtgtgcgaggttggcatcctcgcacgcctcggacttcagtcgctggacaggccag
gagagcctggcagaggacgatgcagagatgtggcgactggtgcagctggagaaggaccgt
cagtgtcgtggcctggagctcattgcctcggagaacttctgcagcagggcagccctggag
gcgctgggctcgtgcctcaataacaagtactcggaaggctaccccgggaagaggtactat
gggggagctgaagttgttgaccagattgaggtgctgtgccagaagcgggcactggaagcc
ttcgacttggaccccgagctctggggagtgaatgttcagccctactcgggctccccggcc
aacttcgctgcctacacggcgctgctgcagccccacgagcgcattatgggcttggacctg
ccggacggcggacacctgacccatggatacatgtctgacatcaagcggatctcggccaca
tccattttcttcgagtccatgccatacaagttaaatcctcaaactggactcattgactac
cagcagctggaggcgactgcacgtctctttcggccccgcctcgtcatcgcgggcaccagt
gcctatgcccgcctgattgactacgccagaatgaaggagatctgcacggaggtcagggcg
caccttctggctgacatggctcacatcagtggcttggtggcagcgaaggtcatcccatca
ccatttgagtatgcagacctggtgaccagtacgacacacaagaccctgcgtggggccagg
gccggcctcatcttctaccgcaaaggcgtcaagtctgtggataagaagacggggaaggag
ctccgctacgactttgaggaccgcatcaactttgctgtgtttccgtccctgcagggtggc
ccgcacaatcacgccattgctgcggttgcggtggcactcaagcaggcgtctttgccagca
ttcaagcagtatgccacccaggtgctgaagaattccaaagccatggccggggccctcctg
aagaagggctacacgctggtgtcaggtggcactgacaaccacctggtgctggtggatctg
cgaccccaggggatggatggagctcgagctgaacgtgtcttggagctgatgtccatcacc
gccaacaagaacacctgccccggagacaagagcgcactgacgcccggcggccttcgactc
ggcgccccggccctcacgtctcggcacttcaaggaagccgactttgagaaagttgtggat
ttcatagatgaaggcatcaagattgctttggacgtgaagaagaaaacgaccaagctccag
gacttcaaatctttcctgctgaccgatgaagagaccaaggcccgagtggctgaagtgcgg
caccgggtcgagtcctttgcccgagtcttccccatgccaggtttcgaggagcgctag
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