Polypterus senegalus (gray bichir): 120524918
Help
Entry
120524918 CDS
T08668
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120524918 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120524918 (smarcd1)
03036 Chromosome and associated proteins [BR:
psex03036
]
120524918 (smarcd1)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120524918 (smarcd1)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120524918 (smarcd1)
PBAF complex
120524918 (smarcd1)
GBAF(ncBAF) complex
120524918 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
120524918
NCBI-ProteinID:
XP_039602716
LinkDB
All DBs
Position
3:complement(22205975..22276462)
Genome browser
AA seq
516 aa
AA seq
DB search
MAARGAFQTAQTGGSGPVPAAGPGPGPGAGAAPGTPTGRMAQVPGAPNHLYRSPMPGPGY
PRPGIPPGSRMTPQGPAMGPPGYGTSPVSRPGMPQSVMDQSRKRPAPQQIQQVQQAAQNR
NQHAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQK
RKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYDATKQKRKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVSVRCTVLLMLDYQPPQFKLDP
RLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLHQIFETQRMKFSEIPQ
RLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAA
LDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDIVGNPEEERRA
EFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgcggcgcgtttcagacggcgcagacaggcgggagcggtccagtaccggcg
gcagggccaggacctggacctggagcgggagctgcaccgggtacaccaaccggtaggatg
gcacaggtgccaggagcccccaatcatctataccgctcccccatgccaggaccaggatac
ccgcgtcctggaattcccccgggtagcagaatgaccccacaaggacctgccatggggccg
ccagggtatggcaccagcccagtgtctcgtcctggcatgccacaatcggtaatggatcag
tcccgtaagaggccagcaccccaacagattcagcaagtgcagcaggcagcccagaatcgc
aaccagcatgctaaaaagaagaaaatggctgataaaattctacctcaaaggatcagagaa
ctggtccctgaatcccaggcttacatggaccttttagcttttgaaagaaaactggaccaa
acaatcatgcgcaagagacttgacattcaagaggccctcaaacggcctattaagcaaaag
agaaagctcagaattttcatctcaaacacttttaacccagccaagcctgatgcagaggat
ggagagggaactgtagcctcttgggagctgcgagttgaagggcgcctcctggaggatacg
gctgtttctaagtatgatgcaacaaagcagaaacggaagttttcttctttcttcaagtct
cttgtgattgagctggacaaggatctttatgggccagacaaccacctggtggagtggcac
agaacagccacaacacaggagactgatgggttccaggtcaaaagaccaggtgatgttagt
gtaaggtgcacagtactgctaatgctggattaccagcctccccagtttaagttggaccca
cgccttgctcgaatgcttggcatccacacgcaaacgagacctgtcatcattcaggctttg
tggcaatatgttaagactcataagctgcaggatccccacgagcgggagttcatcaactgt
gacaaatacctccatcaaatttttgagactcagcgaatgaagttttctgaaattccacaa
cgactccatgccctgttgatgccaccagagcccatcatcataaaccatgtgatcagtgtc
gaccccaatgatcagaagaaaactgcctgttatgacattgatgtggaagtggatgacaca
cttaaaacacagatgaactcctttttgctgtccaccgcaagtcaacaggagattgctgct
ctggacaacaagattcatgagaccattgaaacaattaaccaactgaagacccaaagggag
ttcatgctgagctttgccagggatccacaagggttcatcaatgattggctgcagtcacag
tgccgggatctgaagaccatgactgacattgtgggtaacccggaggaggagcgccgagct
gaattttatttccagccttgggctcaagaagcagtctgtagatatttctactctaaggtt
cagcagcgaagacaagagctggaacaggcgctgggcattagaaacacataa
DBGET
integrated database retrieval system
