Polypterus senegalus (gray bichir): 120524958
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Entry
120524958 CDS
T08668
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03266
Virion - Herpesvirus
psex04145
Phagosome
psex04510
Focal adhesion
psex04512
ECM-receptor interaction
psex04810
Regulation of actin cytoskeleton
psex04820
Cytoskeleton in muscle cells
psex05100
Bacterial invasion of epithelial cells
psex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120524958 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120524958 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120524958 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120524958 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120524958 (itga5)
04810 Regulation of actin cytoskeleton
120524958 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120524958 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120524958 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120524958 (itga5)
04515 Cell adhesion molecules [BR:
psex04515
]
120524958 (itga5)
04090 CD molecules [BR:
psex04090
]
120524958 (itga5)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120524958 (itga5)
Cell adhesion molecules [BR:
psex04515
]
Integrins
Integrin alpha subunits
120524958 (itga5)
CD molecules [BR:
psex04090
]
Proteins
120524958 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
PreP_C
P2_Phage_GpR
Motif
Other DBs
NCBI-GeneID:
120524958
NCBI-ProteinID:
XP_039602801
LinkDB
All DBs
Position
3:complement(28212909..28381434)
Genome browser
AA seq
882 aa
AA seq
DB search
MERRARQYLKTCAHLRLARLCLFTTGLAQLCAGFNLDVDHPSVYTGPEGSYFGFSVEFYL
PNASRFSVLVGAPKANTSQPNITEGGAVFFCPWNQHQHANSSCQSLDFDTKGNDFRMVGS
TSQQMEFKSHQWFGATVRSHGDSILACAPLYHWRTWKEIAASDVTGNCFLSIGNFSQLVQ
YAPCRSDMDGPQGQGYCQGGFSADFTKSGRVVLGGPGSYFWQGQLLSASQQNIVKAYFPD
YFILPASEQLHTRQAQSFYDDSYLGYSVAVGEFTGDTDEDFVTGVPKGDLLFGYVAILNG
TNIKTVSNISGTQMGAYFGYAVAVTDVNSDGFDDLLVGAPMFMVKGPNGQFEEVGQVSVY
LQDGPLSFNSDPQVLTGTQVYGRFGSSIAPLGDLNQDGYNDVALGCPFGGEHQQGVVYIY
NGHAGGLMGTPSQVLIGQWASTNLPPSFGFAIRGNKDLDENGYPDVLVGAFGVDRVSLYR
ARPIVNASATLLITPNMLNPEEKSCFIPQTSHVVSCVSLTFCLTANGRHLPHNIAFSVDL
QLDQRKQKGAVRRVNFLSNRQPSLQQTISVQNGAAETCREMKVYLKDESEFRDKLSSIYV
TLNFTLDSQAPADRHGLQPILNYQTQQLIEQKVQILLDCGEDNICVPDLKLAVHGDRKEV
YLGDDNSLTLTFNARNEGEGGAYEAELYVVPPPESEYIGIVRNNESLSELTCSYEMENQT
RVVICDLGNPMKSKTSLWGGLRFKVPHLKDKKRTVQFEFQIRSKNENNSRSELVHYTLDV
AVSAAVSFLGASHPENVIFPLVNWKATKNPEMEQDIGPLVQHVYEMTNKGPSLISHTLLK
VNCPVKLHSHHLLYPVEIITQGPLNCSTNTSINPFQVKVSHS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggagagacgcgccaggcaatacttgaaaacttgcgcccacttacgcctggctcgacta
tgcttgttcactactggcttagcgcaattgtgcgctggatttaacttggacgtggatcat
ccgagtgtatataccggtcccgagggtagctattttggcttttcggtggagttttacctt
ccaaacgcatccaggtttagtgttcttgttggagcacccaaagccaacaccagtcagccc
aacataacagaaggtggagcggtgttcttctgcccctggaatcagcaccaacatgccaac
agcagctgccagtcccttgactttgacaccaaaggaaatgatttcaggatggttgggagt
acatctcaacagatggagtttaaatcccatcagtggtttggtgctactgtccgctctcat
ggagattccatactggcctgcgccccactgtaccactggagaacatggaaagaaatcgct
gcatctgacgtcacaggcaactgcttcctgtccatcggcaactttagccaacttgtgcag
tatgcgccatgtcgttcagatatggatggcccccaaggacaaggctactgccaaggcggc
tttagtgcagattttacaaagagtggtcgcgttgttcttggaggacctggaagttacttt
tggcaaggtcagctgttgtcggccagtcagcagaacattgtgaaagcctatttcccggat
tacttcatcctgccagcgagtgaacagcttcacacacgccaagcccaatctttctatgat
gacagctacctcggttactctgtggccgtgggagagtttacaggagatactgatgaagat
ttcgtcactggggtccccaaaggagacctgctgtttggctacgtggccattcttaatgga
accaacataaagaccgtctcaaatatttccggcactcagatgggggcctattttggttac
gctgttgcggtgacagacgtgaacagtgatgggtttgatgacctactagtgggagcgccc
atgttcatggtcaagggacccaatggccagtttgaggaagtgggccaggtgtctgtctac
ttacaggacggacccctgagttttaattctgatccccaggtgctgactggcacacaggtc
tacggccgatttgggagttctattgcacctctgggtgacctgaaccaagatggctacaat
gatgttgcacttggctgcccatttggtggagaacatcagcaaggcgtggtctacatttat
aacgggcatgctggaggactgatgggcacaccttcacaagtccttataggccagtgggcc
tccaccaacttgcctcccagctttggatttgccattcgtggaaataaagacctggatgag
aatggctacccagatgtccttgttggagctttcggggtagacagagtttcgctgtacaga
gctcgtccgattgttaacgccagtgccacccttctcatcaccccaaacatgctgaacccc
gaagagaagtcttgctttattcctcagacctcgcatgtggtgtcttgcgttagcctcact
ttctgtcttacagccaatgggcgacaccttcctcacaatattgccttcagtgtggacttg
cagcttgaccaaaggaaacagaaaggagcagttagacgggtgaacttcctgtccaacagg
cagcccagcctgcagcagacaatcagtgtgcagaatggagcggccgaaacctgccgggaa
atgaaggtctacctcaaggatgaatcagaattccgagacaagctctcttccatttacgtt
accctgaacttcaccttggattctcaggcccccgccgaccggcatggcctccagcccatc
ctcaactatcagactcagcagctcattgagcagaaggttcagattctgctcgattgtggt
gaggataacatctgcgtcccagatctcaagctggcagttcatggggaccgtaaagaggtg
tacctcggtgatgacaattccttgactttgactttcaacgcccgcaatgaaggtgaaggt
ggtgcttatgaagctgagctgtatgtggtcccacctccagagtctgagtatattgggatt
gtacgcaacaatgagtctctctctgaacttacctgtagctacgagatggagaatcagacc
agagtagtcatctgtgatttgggcaacccaatgaagtccaagaccagcctatggggtggt
ctacgctttaaagtcccacacttgaaggacaagaagaggactgtgcagtttgagtttcag
atccgcagtaagaatgagaacaattcaagaagcgaactggtccactatacgcttgacgtg
gctgtgtcggctgcagtctcgttcttgggagcatcacacccagaaaatgttattttccct
ctggtcaactggaaagcgaccaagaatcccgagatggaacaggacatagggcctttggtc
cagcatgtgtatgagatgaccaacaaaggcccaagcctaatcagccacacccttctgaag
gtgaactgcccagttaagctgcacagtcaccatctgttgtatcctgtagagatcatcaca
caaggccctctcaactgtagcaccaacacctccataaaccctttccaggttaaggtaagc
cattcataa
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