Polypterus senegalus (gray bichir): 120525016
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Entry
120525016 CDS
T08668
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120525016 (fxr2)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120525016 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
120525016 (fxr2)
mRNA cycle factors
Stress granule specific factors
120525016 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXR_C1
FXMRP1_C_core
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
120525016
NCBI-ProteinID:
XP_039602872
LinkDB
All DBs
Position
3:36009714..36120699
Genome browser
AA seq
670 aa
AA seq
DB search
MDGLAVEVRGSNGAFYRGFIKDVHEDSVTIVFENNWQPERQLPFSDVRLPPPADYHKDIG
EGEEVEVYSRANEHEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTLERIRPVNPNSP
ASSNSFHKVTIPVPEDLRETCSNDSIHKDFRKAIGANCIFYSTAGHELIVLSTSESTVKR
ASLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAFQEEFQVREDLMGLAIGTHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARMYLEFGEDFIQVPRTLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEGMVPFVFVGTKENISNAQALLEYHLAYLQE
VEQLRLERLHIDEQLRQIGVGYRAPPSRSGGTSGAEREKGYLTDESNSSLHGTRTYGGRG
RGRRTNNHNSGYGERTEGTNSEQSNASESEDVNEREPRPRGTGEERARRGGRGRGMGPSG
RGRGGSGSRPLNTISSVLRDPDSNPYSLLDGAAETDQTGDTDASESQTSAERRRRSRRRK
TDQDPSVMDGAVESDSHSVSENGIEDDSKPQRRNRSRRRRNRGARIDGGSASRDRQPVTV
ADYISRAESQSRQKLPQKNKAEKPREEVTLSTEPKEKGNNKAIKRTPSSEKNSGETDTKD
EPASLVNGVS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggacggtctggccgtagaagtccgcggctccaacggagccttctataggggcttcata
aaggatgtacatgaggactccgttacaattgtgtttgagaacaattggcagcctgagcga
caacttcccttcagtgatgttcgactaccaccacctgcagactaccacaaggacattggt
gaaggagaggaggttgaggtatactccagagctaatgagcatgaaccttgtggttggtgg
ttggctagggttcgaatgatgaaaggagaattttatgtaatagagtatgctgcctgtgat
gccacctacaatgaaattgtaacgcttgagcgaattcgaccggtgaatcccaacagccct
gcctcttcaaatagcttccataaagtgacaatccccgtgcctgaagacctccgggaaacc
tgttcgaatgactccatacataaagacttcaggaaagctattggagccaactgcattttc
tacagcactgccggccatgaactgatagtactatccacaagtgagtcaacggtgaaaaga
gcttcccttttaagtgacatgcatttccgaagtatccgcaccaaacttatgttgatgtcc
cgaaatgaagaagcaacgaaacatttagagacaagtaagcagctggcatcagccttccag
gaggaattccaagttcgggaagacctgatggggctggcaattggtacccatggagcgaac
atccagcaggccaggaaagtacctggagtgacagctattgaactagaagaggaaagctgt
accttccgtatctatggcgagacccctgaagctgtgaagcaagcccgtatgtatctggag
tttggggaagatttcattcaagtccctcgcacattagtaggtaaagtgattggaaaaaat
gggaaggtaattcaagaaattgtggacaagtcaggagtagtacgagtacgaattgaggga
gacaatgataaaaaattgcctcgagaagagggcatggttccatttgtgtttgttggcacc
aaggagaatattagcaatgcccaggctctcttggaataccaccttgcctacttacaggag
gttgaacagctgcgtcttgagcgactacacatagatgagcagctacggcaaattggagtg
ggctatcgggcacctcctagccgtagtggtggaactagtggtgctgaacgggaaaaaggc
tatctcactgatgagagtaattcctcccttcatggtactcgaacttacgggggtagagga
cgaggacgtaggactaacaatcacaattctggatatggtgagagaacagaaggtacaaat
tctgaacagtcaaatgcctctgaatctgaagatgtaaatgagcgtgagccacggcctcgg
ggcacaggagaggagagagcccgtcgtggaggacgaggtcgaggaatgggaccttctggc
cgtggccgaggaggatcaggaagtaggccacttaacactattagttctgtactaagagat
cctgacagtaacccctattccctcttggatggagctgcagagactgaccagactggagac
accgatgccagtgaaagccaaaccagcgcagagagacgtagaagatctcgcagacgtaaa
actgaccaagaccccagtgtaatggatggggctgtggaatcggacagtcactctgttagt
gagaatggcattgaagatgacagcaagccccaacggcggaaccggagccggcgccgccgc
aaccgtggggcccggattgatggaggctctgcaagcagagaccgccaaccagtaactgtt
gcagattacatttcccgtgcagaatcgcaaagccgtcagaaactaccgcagaaaaacaaa
gcagagaagcctcgggaagaagtgacactttctactgagccaaaggaaaaaggcaacaac
aaagccatcaaacgaacccccagctcagagaagaatagtggtgaaactgacacaaaagat
gaaccagcatctctcgtcaacggagtctcgtaa
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