Polypterus senegalus (gray bichir): 120525017
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Entry
120525017 CDS
T08668
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120525017 (sox19b)
Transcription factors [BR:
psex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120525017 (sox19b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120525017
NCBI-ProteinID:
XP_039602876
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All DBs
Position
3:36279537..36312883
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AA seq
297 aa
AA seq
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MYSMMEHEIKSTGPPPPHQHGSGMSPVGNGVGATHPGTKGTCPPGGDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDYK
YKPRRKNKPLLKKDNAAGKYPLSAGNLLAAAAAAQGPGGSPRMDSYGWGPTGGYAGMQSE
ALGYTQQLHRYDLSALQYPPGMAPSQTYMNGANSYSSMSYGGSAQQASSVMSMVKPEPVS
HSPTGAPSHHRGGLQGDLRDMISMYIPSNDTADPSGQRGYASVQQHYLNGTVPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacatgagataaaatcgacaggacccccgccaccccatcaacac
ggatctgggatgtccccagttggaaacggcgtgggggccactcaccctgggaccaagggg
acgtgtcccccaggcggagaccccatggacaaagtaaagcgacctatgaatgccttcatg
gtttggtcccgtggccagagacgcaagatggcacaggagaaccccaaaatgcacaactcg
gagataagcaaaagacttggtgccgagtggaagcttttaacagacgcggagaagcggcca
tttatcgacgaagccaagcggctgcgagcactacacatgaaggagtatcccgactacaaa
tacaaaccccggcgcaagaacaagccgctcctgaagaaggacaacgccgccggcaaatac
ccgctctccgccggcaatcttctggctgcggcggcggctgcgcaaggacccggggggagc
cctcgcatggacagctacggatggggccccactggggggtacgcgggcatgcagagtgag
gcgctgggttacactcagcagctgcaccgatatgacctgtcagctctgcagtacccccct
ggcatggccccctcgcagacctacatgaacggcgctaattcttacagctccatgtcatat
ggagggagtgcccagcaagccagctctgtgatgtcaatggtcaaacctgagccagtgtca
cactctccaactggggcccctagccaccaccgagggggtctgcaaggagacctgcgtgac
atgatcagcatgtacatccccagcaatgacacagccgacccatctggacaaagaggctac
gccagcgtccagcaacattacctcaatgggactgtgcccttgacgcacatctga
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