KEGG   Polypterus senegalus (gray bichir): 120525105
Entry
120525105         CDS       T08668                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
psex  Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:psex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psex03400]
    120525105 (per1b)
DNA repair and recombination proteins [BR:psex03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120525105 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 120525105
NCBI-ProteinID: XP_039603048
LinkDB
Position
3:46547940..46615719
AA seq 1457 aa
MTDSNYDSACSHGNDVPAVLPTAVAVVGTSYPGSSDSPRSNICNKNCTSGNCDNCNSLTN
NSSTNKVGPPNNGAGGSTGSGVRSDWGSRVQVKPLCQQKQATGTSSDDMDVNSNGNSSGN
DSNGGESNENESRGRQSTRSSNSSSSRNGKDSAMMLETTESNKSSNSQSPSPPSSSIAYS
LLSASSEQDHPSTSGCSSDQSARVKTQKELMKALKELKIRVPAERRSKGKPSTLAALQYA
LSCVKQVKANQDYYHQWTADENQTCKLDLTSYTVEELENITSKYTLKNTDTFCVVVSLLS
GKIVYISHQAAYILRCKEEFLNGAKFAELLAPQDVSVFYSSTAPCHLPSWSACIGTAAPP
DCTQEKSMFCRISAGRGGDNEIRYYPFRLTPYLVTLRDLDTADGQSCCLLIAEKIHSGYE
APRIPADKRIFTTSHTPSCLFQDVDERAIPLLGYLPQDLVGTPVLLYLHPEDRPIMVAIH
KKILQLAGQPFDHSPIRFCTRNGEYVTIDTSWSSFVNPWSRKVAFIIGRHKVRTSPLNED
VFTTPRAVDIKHLEPDIHELSGQIHRLLVQPVHTNSSLGYCSVGSNGSHEQFLSIASSSD
SNGIPAEEARLHKPMTFQQICKDVHMVKNQGQQVFIESRTKPLPKKSSSTGNDAPKQATS
KPKQITCVSPASALVETVRKEAPSTYSYQQINCLDSIIRYLESCNVPNTVKRKCGSSSCT
ASSNSDDDKQKMGEDGPNINKGSVVELGTPGGNKESKGTAHPLTPLALPSKAESVVSITS
QCSFSSTIVHVGDKKPPESDIVMMEEAPATPVQPQPAAPASATSQPLDKDSKDPYRKVGL
TKEVLSIHTQKEEQAFLSRFKDLSRLRVFESPCEQQQVGRSKTGVRNSRHYPAAGSSSRR
GRGGKSKAKRLKHHESSEHAMCSGGGSGNRGQSASSPNLPQCSTFHSALPGPSSVSWPPS
VTSQASLPPLPFPGVLPTYSIPMFAQRDSLPSAPQLAQGTFTETQSGTCFPMQPVPSQYP
SPIVTPMVTFVLPNYMFPQLNGTLPQPYFPNQMFSFTSAGTSTSNMPSAPTTTMIQPNTQ
ELSSTSVAPPLPLQETAKPYSCCSTPPSSSQPPNDREEAESPLFESRCSSPLQLNLLQLE
ETTAGNRLEMTSSGTGVQGQVSGSGSGSGNANTVPEWPGAQAGGVSGKACPRNDGNNQKE
NENHGEANESFNQDAMSSSSDLLDLLLQEDSRSGTGSAASGSGSAVSGSMGSGSNGCSTS
ACGTRSSQSSHTSKYFGSIDSSENDNNNKKCVSGLATESDQFIRYVLQDPIWLLMANTDE
KVMMTYQLPVRDKETILREDREKLKAMQKHQPRLTEEQKKELCEVHPWVKTGRLPKAVNI
SACVGCGISSSVAVATPFDVELHEMDLSGMLDSGEEGCHKGNVPAETAMEEEEEELEDQE
MPSAEQEMESTSQQRHE
NT seq 4374 nt   +upstreamnt  +downstreamnt
atgactgacagcaactacgattctgcctgcagtcatggtaatgatgtgccagctgtgctg
cctactgctgtggccgttgtaggaaccagttaccctggcagcagtgatagccccaggagt
aacatctgcaataaaaattgcaccagtggcaattgtgacaactgtaactctctcacaaac
aacagtagtaccaacaaagttgggccaccaaacaatggagctggaggaagcactggaagt
ggagttcggagtgactggggttcacgggtgcaagtcaagcccctttgtcaacagaagcag
gccacaggaacatcttctgatgacatggatgtgaacagtaatggcaactcaagtgggaat
gattcaaatggaggagagtcaaatgaaaatgaatctcgtgggcgccagtcaacacgaagc
tccaacagtagctctagccgaaatggcaaggattctgcaatgatgctggaaactactgag
agtaacaagagctcaaattctcagagcccatctccaccaagcagttcgatagcttacagc
ttattaagcgccagctcagagcaagatcatccttctactagtggctgcagctctgaccag
tcggctcgtgtgaaaacacaaaaagaactaatgaaggctctaaaggagttaaagatccgt
gtgccagccgaaaggcgaagtaaagggaaaccaagcactcttgctgcactacagtatgca
ttgtcatgtgtaaagcaagtcaaagcaaaccaagattattaccaccagtggacagctgat
gagaaccagacatgtaaattggacttgacttcttacacagttgaagaacttgaaaatatc
acatcgaagtacaccctaaaaaatacggacacattttgtgtagtggtgtctttgctgtca
gggaaaattgtgtatatttcacatcaggctgcatatatcctgcgttgcaaggaagaattc
ttgaatggggccaaatttgctgaacttctggcacctcaagatgttagtgtgttttacagc
tcaactgcaccctgtcatttaccatcctggtctgcttgcattggaacagctgccccacca
gactgcacacaagagaaatccatgttctgtcggatcagtgctggtcgaggtggagataat
gagattcgctattatccttttcgtctcactccctacctggtcacattgagggacctggac
acagcagatggacagtcatgctgcctgctgattgcagagaagattcactctggatatgag
gcaccaagaattcctgcagacaagcgtattttcaccacaagccacacacctagctgtttg
tttcaagacgtagatgaacgtgctatcccattacttggttatttgcctcaggatttggta
ggcactccagttctgctctaccttcaccctgaagatagaccaatcatggtggctattcac
aagaaaatattgcaacttgctgggcagccatttgaccattcaccaatccggttttgcaca
cgcaacggagaatatgttacaattgacaccagttggtccagctttgttaatccctggagc
cggaaagtagcctttatcattgggagacacaaagttagaacgagtcccctgaatgaggat
gtatttacaacaccccgtgctgtagatatcaagcatcttgagcctgatattcatgagctc
agtggacagatccatcgtcttcttgtgcagccagtccatacaaacagctcccttgggtac
tgtagtgttggaagcaatggatctcatgagcaattcctgagtattgcttcatccagtgac
agtaatggcattcctgcagaagaagcaagattgcataaaccgatgacattccagcaaatc
tgcaaagatgtgcacatggttaaaaatcaaggtcagcaagtctttatagagtcaagaacc
aaacctttaccaaagaaatccagttccacaggtaatgatgctcctaagcaagcaaccagc
aaaccaaagcagataacatgcgtttccccggcttctgccttagtagaaactgtcagaaag
gaagctccctccacctattcctaccagcaaatcaactgcttggacagtattattaggtat
ctggaaagttgtaatgttcccaacacagtgaagaggaagtgtggctcctcttcttgcaca
gcttcttcaaactcagatgatgacaagcagaagatgggagaagacggaccaaatattaac
aaaggctccgtggtggagttggggaccccaggaggtaataaggagtcgaaggggacagct
caccccctcacccctctggcgcttcccagtaaagcggagagtgtagtttccatcacaagc
cagtgtagcttcagcagcaccatcgttcatgttggggacaagaaaccaccggagtcagat
attgtaatgatggaggaagccccggccacgcctgtgcaaccacaacctgctgctccagca
agtgctacaagccagcccctggataaggactcaaaagacccataccgtaaggttggactt
accaaggaggtgctgtctattcacacacaaaaagaagaacaggcttttctcagtcgtttc
aaagatttgagtcggcttagagtctttgaatcaccatgtgagcaacaacaagttgggcgg
tcaaagacaggtgtccgaaattccaggcactatccagcagcaggcagcagcagccggcga
gggagaggtgggaagtcaaaggccaagcgtctgaaacatcatgaatcttctgagcatgcc
atgtgtagtggtggcggttcaggcaatcgaggccagtctgcatcatccccaaacttgcca
cagtgctctacttttcattcagctctacctggtccttcttctgtctcttggcccccatct
gttacttcacaggccagtttgccaccgctgcctttccctggagtcttgccaacatactct
atacccatgtttgcccagagagattctttgccatctgccccccagcttgcacagggaaca
tttacagaaactcagagtggcacatgctttccaatgcagcctgtcccttctcagtatccc
tctccaatagttactccaatggtgacatttgtactgccaaattacatgtttccacaactt
aatggcactcttccacagccatattttccaaaccaaatgttttctttcacatcagcaggt
acatctacttctaatatgcccagcgctcctactaccaccatgatacaacccaatacacaa
gagcttagttcaacaagtgtagccccaccgttacctctacaggagactgcaaaaccatat
tcctgctgcagtacaccgccatcaagcagtcagccccctaatgatcgggaggaggcagaa
tccccactgtttgaatctcgctgcagctctcctcttcagctaaacttattgcagcttgag
gagacaacagcagggaaccgactggaaatgacttcttctggcaccggggtacaaggccaa
gtttctggaagtggctcaggaagtggaaatgccaacactgttcccgagtggccaggagca
caagctggaggtgtaagcgggaaagcatgcccaagaaatgatggcaacaaccagaaggag
aatgaaaatcatggagaagcaaatgaatcgtttaaccaggatgctatgtcaagctccagt
gatctcctggaccttctactgcaagaagactcgagatctggcacaggatctgcagcatct
gggagtgggtcagctgtttctggctccatgggctcaggctctaatggctgtagtacctct
gcttgtggaacaagaagcagtcagagtagtcataccagtaaatattttggcagcatcgac
tcctctgagaatgataataacaacaagaagtgtgtcagtggattggcaactgaaagtgat
cagttcatcagatatgtacttcaagacccgatttggttgctcatggccaatacagacgag
aaggtcatgatgacttaccagctgcctgtcagggataaggagaccatccttcgagaggac
agggaaaaactgaaagctatgcagaagcatcagccacgattaacagaagaacagaagaaa
gagctctgtgaagtgcatccatgggtgaaaactggccgcttacccaaagccgtcaacatt
tcagcgtgtgtaggatgcgggataagctcgtctgttgcagtggcaaccccatttgatgtg
gagctccatgagatggacctgagtggtatgctggattctggagaggaaggctgccacaaa
gggaacgtccctgcagaaacggcaatggaggaggaggaggaggagctggaagaccaagaa
atgccttcagcagagcaggagatggagagtacgtcacaacagagacatgaatga

DBGET integrated database retrieval system