Polypterus senegalus (gray bichir): 120525141
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Entry
120525141 CDS
T08668
Symbol
rnf167
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120525141 (rnf167)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120525141 (rnf167)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120525141 (rnf167)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
zf-RING_4
Prok-RING_4
PHD
ECSCR
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
120525141
NCBI-ProteinID:
XP_039603134
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All DBs
Position
3:53013319..53078696
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AA seq
382 aa
AA seq
DB search
MSPGIMQSLAALSVYLCSVFLVPCLLGPLPYVGAFIYAYSNNNNTTMIFDDLPAMFGNQL
PKDGLKGYLVDAKPLNACAQLHPPPTSNDTSKFIVLIQRNECNFDIKVLHAQQAGYSAAI
VYNTGSDKLLTMGFSDEDIVKQIEIPSVFIGATAAEYLQLYFLYDKAAHIVLLPDYAFPL
GFYLIPFTGVVAIIIIVMLSVMIVRCVQYRRRLRRNRLTKDQLKKIPVHKFKKGDIYDVC
AICLEEYEEADKLRILPCSHAYHCKCVDPWLTQTKKTCPVCKQRPFRSDDDSESEVEEEN
SPEVGGSSERTPLLSPSNPPLGGGVHSFGSMEESDGIIPQDDYYASENEDDSDGQCSQSE
GDTVQLLNPSANEELSRSPINI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagggataatgcagtctttggcagctctcagtgtctatctatgcagtgttttc
ttggttccatgcttgctgggacctctcccttatgttggagcttttatctatgcatattcc
aacaacaacaataccacaatgatatttgacgacttgcctgctatgtttgggaatcagctg
ccaaaggatggcttaaaaggttatcttgtggatgcgaaaccactgaatgcttgtgcacaa
ctgcatccaccccctaccagtaatgacacaagcaaatttatcgttcttatccagagaaat
gaatgcaactttgacatcaaggtactgcatgcacagcaggctggctacagcgcagccatt
gtctataatacaggttcagacaaattattaactatggggttcagtgatgaggatattgtt
aagcagattgaaatcccttcagtcttcataggtgccactgcagcagaatatttacaactg
tacttcctctacgacaaagctgctcacattgttttgcttccggattacgcctttcctctt
ggcttctacctcatcccttttactggtgtggttgccatcatcatcatcgtcatgttatca
gttatgattgtacggtgtgtacagtaccgcaggaggctgaggaggaacaggcttactaaa
gaccagctgaagaagatccctgttcataaatttaagaagggtgacatatatgatgtttgt
gccatctgcttagaggaatatgaagaagctgataaactgagaattcttccctgctctcat
gcttatcattgcaagtgtgtggacccttggctcacacagacaaagaaaacttgccctgtg
tgtaagcaacgtcctttccgctcagatgacgattctgaatctgaggtagaagaggaaaac
agcccagaagttggtggaagctctgagcgtactcctttgttaagcccgtccaacccaccc
ctgggtggtggtgtccattcctttggctccatggaggaatcagatggtatcattccccaa
gatgactactatgcatctgaaaatgaggacgattctgatggccaatgcagccagtcagaa
ggagacaccgttcaacttctaaacccctcagccaatgaggaactatctagaagcccaata
aacatctga
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integrated database retrieval system
