Polypterus senegalus (gray bichir): 120525189
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Entry
120525189 CDS
T08668
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psex01001
]
120525189
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120525189
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120525189
Protein kinases [BR:
psex01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
120525189
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120525189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
PHD-1st_NSD
PML_CC
zf-RING_5
FTCD_N
UvrA_inter
Motif
Other DBs
NCBI-GeneID:
120525189
NCBI-ProteinID:
XP_039603222
LinkDB
All DBs
Position
3:complement(59507461..59666817)
Genome browser
AA seq
1303 aa
AA seq
DB search
MAENKGDGDSENPENVILVPCVEDTATGVEKEMETPVITEQAQVYIEALSPEKSGAEPNG
GGESGSPGNSNRENAETAGPEEPEISTATASTAIVLPLAAPAHYPVTLTAPPPSTGTSAP
LVSGPIASMAHTSTPTSSTEPIATPVTSTTPSPAPTTLAPALSSTAEQVAPLTILTETPP
MPDSLGTPGPVTHSVTETPPVHPTSTTTPPVLTSTAMTPPVPTTPTATQPAPTSTTTTPP
VPTTPTAHPPVLMAPAVPSQTPGTPTASTPSAVSVADSSPSTAPAPTPPINLLDTCAVCR
QSLQSRDCEPKLLPCLHSFCLRCIPPPDRQVSLQLGPHGQETQIVNVMRCPVCRQDFKQT
DVVDNYFVKDTSEVSGGSDENSAQVCTSCEDNAHAVGFCVVCGEWLCKTCIEAHQRVKFT
KDHMIRKKEDVSSDSVGTSGQRPVFCPVHKQEALKLFCETCDRLTCRDCQLLEHKEHRYQ
FLEEAFQNQKGIIETFMAKLQEKKNYVNFAASQVQSRIKEVNETHKKVEHEIKVAVFTLI
NEINKKGKSLLQQLESVTKERNMKLMHQQKDITSLAHQVMHVLNFANWAICSGSSTALLY
SKRLITFQLRYILKARCDPVPSANGAVRFFCDPTFWAKNVVNLGNLVIENKPPPVHAPNV
VVGPGPGPGPGPGPGQVASVPNHTGKHPGQINLAQLRLQHIQNAAFAHKQQQMQQLRMAQ
HVPQHPRPGAPQMVQQQPPRLISMQTMQRASMNGAFQAHQMRMAQSQSRMPGVPRHNGQQ
YPMMQPQLQRQHSNPGHTGPFPVASLHNSVANPTSPTTASMASANRGPTSPSVSTIELIP
SVTNPENLPCLPDIPPIQLEDAGSSTLDNLLSRYISASHHIPLAPTGNMNPSPGPSALSP
GSTGITNSHTPVRPSSTSSTGSRGSRSQSLSSCGSSGRTASGIEQMKIKQEPGVEEECGF
TGTMVKQERGDDGRRSACMLSSPESSLTPPLTAPAPLDNDIDVLRSLEEHVKMEPKESSG
SCQQQALTTTTPVANGKGSPRGFLHRSPRVTGPNNDSKDDDPNEDWCAVCQNGGNLLCCD
KCPKVFHLTCHVPTLLSFPSGEWICTFCRSLNKPEVEYDCDNLQLSKKGKTVNGLNPVDQ
RKCERLLLYIFCHELSMEFHEPVPASIPNYYKIIKKPMDLGTVKKKLQKKHSQHYQTPQE
FVSDVRLIFRNCAKFNEMSRIIQVYDEKTQINLQAESEVAQAGKTVELFFEEKLKEIYID
QSFPAITDLEPEEDEEITEDSDDDFVQPRRKRLKIDEKPVHIK
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacaaaggcgatggggacagtgagaaccccgaaaatgttatcttagtccct
tgcgtagaggatactgcaactggtgtggagaaggaaatggaaaccccggtgattacagag
caggcacaggtatatatcgaggccctgagtccagaaaagagcggcgctgagccgaacgga
ggaggggaaagcggcagccctgggaacagcaatagagagaacgcggagacagcgggcccc
gaggagcccgaaataagcaccgctacggcctccactgccatagtattacctttggcagct
cccgctcattatcctgtcaccttgacggcgcctcctccgtcaaccggcacgtcggctccg
ctcgtttcgggtcccattgcttcaatggctcacacatcgacccccacctcctcgacagaa
cccattgctacccccgttacatcgactacaccctctccagctcccaccaccctagcgcct
gctctttcatccacggctgagcaagttgcacccctaacaattttgactgaaactccccca
atgcccgattccctgggtacgccgggaccggtgacccacagtgtaacggagacccctcca
gtgcaccccacttcgacgacgacccctccggtgctcacctcaacagcgatgaccccacct
gtacccaccactccgacagcgactcagccagcacccacctctacaactacgacccctccc
gtgcctacgacgccgacggcacaccccccggtactcatggctccagcggtaccttcacag
actcccggcaccccaactgcttcgactccctctgcagtatcagttgcagattcctcgcct
tccacagctccagcaccgacgcctccgatcaatctgcttgacacttgcgctgtatgccgg
cagagcctacagagcagggactgtgaaccgaagctgctgccgtgtttgcattcgttttgt
cttcgttgtatccctccaccagaccgccaggtcagcctacagctggggccgcacggacag
gagacgcagatcgtgaatgtaatgcgctgcccggtctgccggcaggacttcaagcagaca
gatgtggtggacaattattttgtgaaagatacgtcggaggtttctggtggctctgatgaa
aattcagcacaggtatgcacaagctgtgaagacaatgctcatgctgtgggcttctgtgtt
gtgtgtggtgagtggctttgcaaaacttgcatagaagctcaccagagagttaaattcaca
aaagaccatatgatccgtaagaaggaagacgtttcttcagactcagtgggaacctcaggg
caacgtcctgtcttttgtccagtacataaacaagaagccttgaagcttttctgtgagaca
tgcgacagactaacttgcagggactgccagctgctggaacataaagagcacaggtaccag
tttttggaagaagcctttcagaaccaaaaagggataattgagacgtttatggcaaagctt
caagagaaaaaaaactatgtgaactttgctgcttcccaggtgcaaagcaggataaaggaa
gtaaatgaaactcacaaaaaagtggagcatgaaatcaaagtggcagtcttcactctaatc
aatgagattaacaaaaagggaaaatctttgctgcaacagctagagagtgtgactaaggaa
cgaaatatgaagctaatgcatcaacaaaaggatattaccagccttgctcatcaggttatg
catgtccttaattttgccaactgggctatctgcagtggaagcagcacagctttgttatac
agcaaaagactgattaccttccagttacgatatatactcaaagcccgttgtgatcctgtt
ccctctgccaatggtgctgtgcgttttttctgtgaccccacattctgggcaaagaatgtg
gtcaatcttggtaacctagtgattgaaaacaagcctcctccagtacatgcccctaatgtg
gtagttggaccagggcctgggcctgggccagggcctggacctggtcaggtggccagtgta
ccaaaccacacaggaaaacatccaggtcaaatcaacttggcacaactaaggctacagcac
atacagaatgctgcatttgctcacaagcagcagcaaatgcaacagcttcggatggcacag
catgttcctcagcatccacggccaggggctcctcagatggttcagcagcagccacccagg
ttaatcagcatgcaaactatgcagcgagccagtatgaatggtgcttttcaggctcaccag
atgagaatggcccagagccagtccagaatgccaggtgttccccggcacaatggccaacag
taccccatgatgcagccacagctacagagacagcactccaacccaggtcatacaggacct
tttccagttgcttcactacataatagcgttgccaaccccactagcccaaccactgccagc
atggcaagtgcaaaccgtggtcctaccagcccctctgtatccaccattgagctgattcct
tcagtgaccaatccagaaaatcttccctgccttccagacattccacccatacagcttgaa
gatgctggctctagtacacttgataacctgctaagcaggtacatttcagcaagccatcat
attcctctggctccaacaggtaacatgaatccatctccaggaccttctgctctttctcca
ggttcaacaggtatcacgaactcacacactccagtgaggccttccagcacatccagcaca
ggtagcagaggcagtcgctctcaatctctttccagctgtggttcctctgggcgaacagca
tcaggaattgaacagatgaagatcaagcaagagccaggagtggaggaagaatgtggcttc
acaggaacaatggtcaagcaggaaaggggtgatgatggacgccgcagtgcctgcatgtta
agcagtcctgaaagtagcctcactccccctctgacagccccagcacctttggataatgac
attgatgtattacgaagtcttgaagagcatgtgaaaatggagccaaaggaatcttcagga
agttgtcagcagcaagctctgacgacgacgactccagttgccaatggcaaaggctctcct
agaggtttcctgcatcggtcacctcgtgtgacaggcccaaacaatgatagcaaagatgat
gacccaaatgaggactggtgtgctgtctgccagaatggaggaaacctactatgctgcgat
aaatgccctaaagtatttcacctcacctgccacgtacccactcttctaagctttcctagt
ggagagtggatctgcactttctgtagaagtctgaataagccagaggtagaatatgactgt
gacaatttgcagctcagcaagaaagggaaaactgtcaatggactgaaccctgttgaccaa
agaaaatgtgaacgtcttctactctacattttttgccacgagttaagcatggaatttcat
gagccagttccagcctctatacccaactattacaaaatcattaagaagccaatggatctg
ggtacagtaaagaagaaattgcaaaagaagcactctcaacactatcaaacaccgcaggag
tttgtatcagatgtacggctcatctttaggaactgtgcaaaattcaatgaaatgtctcga
attatccaagtatatgatgagaaaacacagattaatttgcaggcagaatctgaggtggca
caggcaggtaaaactgttgagcttttctttgaggaaaagctgaaggaaatttacatagat
cagagcttcccagccatcactgaccttgaacctgaagaggatgaagaaattacagaggac
tctgatgatgacttcgtacagccacggcgcaaacgcttaaaaattgatgaaaaacctgtt
cacatcaaataa
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