KEGG   Polypterus senegalus (gray bichir): 120525202
Entry
120525202         CDS       T08668                                 
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04137  Mitophagy - animal
psex04144  Endocytosis
psex04145  Phagosome
psex04148  Efferocytosis
psex05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:psex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120525202
   04145 Phagosome
    120525202
   04137 Mitophagy - animal
    120525202
   04148 Efferocytosis
    120525202
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120525202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psex04131]
    120525202
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psex04147]
    120525202
   04031 GTP-binding proteins [BR:psex04031]
    120525202
Membrane trafficking [BR:psex04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    120525202
 Endosome - Lysosome transport
    120525202
Exosome [BR:psex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120525202
  Exosomal proteins of other body fluids (saliva and urine)
   120525202
  Exosomal proteins of colorectal cancer cells
   120525202
  Exosomal proteins of melanoma cells
   120525202
GTP-binding proteins [BR:psex04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    120525202
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta SDR-like
Other DBs
NCBI-GeneID: 120525202
NCBI-ProteinID: XP_039603246
LinkDB
Position
3:complement(62528020..62548301)
AA seq 217 aa
MAGRAASRPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITNQETFARAKTWVKELQR
QASPNIVIALAGNKADLSSKRAVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQSGPGGTAGRVRGGVDLSEPSQPAKTQCCSN
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcaggccgcgcagcttctcgtcccaatggccagtctcaggctagcaagatctgccaa
ttcaaactggtactgctgggagaatcagcagtgggcaaatcaagtttggttctgcgcttt
gttaaggggcagtttcatgaataccaagagagcaccattggtgctgcttttctaacgcag
tcagtttgcttagatgacacaacagtgaagtttgaaatctgggatacagcaggccaggaa
aggtaccacagcctggcaccaatgtattaccgtggagcccaggctgccattgtggtgttt
gatatcaccaatcaggaaacctttgcacgggcgaagacttgggtgaaggaactgcaacgc
caggctagtccaaacattgtgattgccctggctgggaacaaagctgacctttcaagcaag
cgagctgtagagtatgaggaagcccaggcctatgcagatgacaacagtttgttgttcatg
gagacgtcagccaagactgctatgaatgtaaatgacctgttcttggccatagctaaaaaa
ctgccaaagagtgaaccacaaagtggtcctgggggaacagcaggccgggtccgtggagga
gtggaccttagtgagccaagccagcctgcaaaaacccagtgttgcagcaattag

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