Polypterus senegalus (gray bichir): 120525464
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Entry
120525464 CDS
T08668
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a
KO
K24720
tubby-related protein 4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120525464 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
Other domain-containing proteins
Tubby family proteins
120525464 (tulp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_WDHD1_1st
SOCS_box
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WD40_Prp19
WD40
WDR55
Beta-prop_ELP1_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
120525464
NCBI-ProteinID:
XP_039603714
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All DBs
Position
3:complement(109398047..109528436)
Genome browser
AA seq
1634 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGIISMSWNYPSFLVEDSSESDTDSDDYSPP
QDGPTVYPIPIQSIKPLLTVSFTSGDISLMNNYDDLSPYVIHSGLKDVVVQWCSQGDLLA
VAGIERQNLPTDPSIIPILRNALVKFYNVHGEHIYTLETPAQRSITTICWGHRDSRLFLA
CGPALYVIRVEHRIASLQLLCQQAIASTLKEEKDISKLTLPSRLCSYLTAAFIQTIKPPI
PDPNNMRDFVSYPTVGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKL
RPEFVIMDPKMDSKTDEVYGNSLISSMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSP
KLSRINIETRKSPKLSRASQDITRSPRLPIRKPSIGSPSLARREFPLEDISQHNYLAQVT
SNIWGTKFKIVGLASFLPNNLGAVIYKTSLLHLQPRQMTIYLPEVRKVSLDYINLPVFNP
NVFSEDEDDLPVTGSSGVPDDNPPCTVNIPIAPIHSSAQAMSPTQSIGLVQSLLANQNVQ
LDVLTNPTAAAAATAVAAAVAGNSDHSQDSGINTQYSVPNRYSSPGQVIFGGLEMGRLLV
GPPPPPPPPPPPQQPLSPPQPPLPSYPPPHHLQGMLHLPPVISDHGPEREHEHHQKSKSL
RPGPQLAEGDAVIFSSPLEIQISKMNPPPPYPGTGTGTASAAAAVPSAATVAAAAAAAAT
NSNASPSSVDLCLKKNEFSLYPAAPQYQTPLGYERITTFDSSGNVEEVCRPRTRMLCNQN
VYTLGPGSSATLRVTTSDGKKVKVPCTSATLNRLTVPRYSIPSGDPPPYPESVNTIGRNT
NHRIDSSLIHATLRRNNRETSLKMTQLMDAQRTLPTKSKLNSIAAAAAVTYQQRIPAALY
TCSQCSNGSTSGGNAGVSGVNNSSSSNSNGISGGPLIRQDLPPANATQHSTVIVHSNSTS
PLTSQSSYNLLSPPDSCRDRTEYINSAFTEDESVTQQCQIEKSMRHLAISDVTLAVKRPP
PYQWDPSATEEIWVPQERPTLGAPPSVHKPPPLILNPSQHIDMSRLPFVLSPKSPTSPNS
NFQAGYQITLPFPPGAGYSGGQLQALQPIPQPCSPKEVVAPVPFSQQETPMVLPPGYPPN
ISNLACCPLPPMYPGGSTCAGLQLPPIALHPWNTYGSCPPIPNSTGTLQPKTHLLVEKPV
LSPPPPADLQNHIGATEAVAEAGENFQEVLSLNESPIPQRSDKFSKKSRKRLDSRAEEAN
VPAITEGKVKKEARALGDFNSLISSPRLGREKKKPKNQKEQLKSKKLSKTNEFQDSSESE
PELFISGDELMNQSQSGKKGWKTKRNLRTASELDEFKCRKASEKEDRSLGSQGFVFVMAN
KQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQ
AFAVALANVTQRLK
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagctgtggaacatggtccagttctttgtagtgactcaaatattttatgcctc
tcatggaaaggccgggtacctaagagtgaaaaggagaagccagtttgtcggagacgctat
tatgaggaaggatggcttgcaactggcaatggtcgaggtgttgttggagtgacattcaca
tcaagtcactgcagaagagatagaagtacaccacaacgaatcaatttcaatttgagaggt
cataacagtgaggttgtgttggtgagatggaatgagccctttcaaaaactagccacatgt
gatgcagatggtggaatatttgtctggattcagtatgagggcaggtggtcagtggaactt
gtcaatgaccgaggggctcaggtgagtgactttacttggagtcacgatggaactcaggct
ttaatctcttaccgggatggatttgtcttggttggatcagtgagtggacaaaggcactgg
tcctctgaaataaatttggaaagtcaaattacatgtggaatatggacaccggatgatcag
caggtgctatttgggacagcagatggtcaagtgattgtgatggactgccatggacgcatg
cttgcccatgtgcttcttcacgaatctgatggaattatcagcatgtcctggaactaccct
agctttctcgtggaggacagcagtgaaagtgatacagattctgatgactactcgcctcct
caggatggtccaaccgtttatccaattccaatacagagcataaaacctctgctgactgtc
agcttcacttcaggggacattagtttaatgaacaattatgatgacttgtctccttatgtt
atccactcaggactaaaggatgttgttgtacagtggtgctcccagggtgatctattggca
gtggctggtattgaaagacaaaatcttccaactgatcctagcataattccgatcttgagg
aatgctcttgttaaattttacaatgtccatggagaacatatttacaccctggagacacca
gcacaaagaagcatcaccacaatatgttggggacatagagattcccgactgtttttagcc
tgtggcccagcactctatgtaattcgagttgaacacagaattgccagcctacagcttcta
tgccaacaggccatagccagtacacttaaagaagagaaagatattagcaaactcacctta
ccatctcgcctctgctcttatctcactgctgcttttatacaaacaataaagcctcctatt
cctgaccctaacaacatgagagactttgtcagttatcccacagtggggaatgaaagattg
cattgtacaatgaagcgaacagaggataatcctgaagttggtggcccttgttacactctc
tatctggagtatttaggtggtctagtacccattcttaagggtcgtcgcattagcaagctc
cgtcctgagtttgttataatggatcctaaaatggatagtaaaactgatgaagtatatgga
aatagtttaatttcttccatgatcgacagctgtaattgttccgactccagtgatattgaa
ctgagtgatgactgggtgggaaaaaaatcaccaaagatatctagaggcagcaagtcacct
aagctttccagaattaacattgaaactagaaaatcacccaagctatccagagcctctcaa
gacataacaagatctccacgtttacctataagaaaaccttctattggatctccaagttta
gctcgtagagagtttccattagaagatatatctcagcataactatcttgctcaggttact
tctaacatttggggaacaaagtttaagattgtggggcttgcttcttttttgccaaataat
cttggtgcagtaatatataaaacaagcctgttgcatcttcagcctagacagatgactatt
tatttacctgaagtgcggaaggtttccttggattatattaacctgccagtattcaaccct
aatgtgttcagtgaggatgaagatgatttgccagttacagggtcttctggagtgccagat
gataaccctccttgcaccgtgaacattcctattgctcctattcacagttctgcccaggcc
atgtctcccacacaaagcattggactagtccagtctcttttggctaatcaaaatgttcag
cttgatgtactaaccaaccccactgctgctgcagcagctacagcagttgcagcagcagta
gctggtaactcagaccacagccaggacagtggaataaatactcaatattcagtacctaat
agatattctagccctggtcaagtgatattcggaggtctggaaatggggaggctccttgtt
ggacctccaccaccaccacctccaccacctcctccacaacaaccattgtcacctccacag
ccacctttgccttcttacccacctcctcatcatcttcaagggatgttacatcttccacct
gtaatctcagatcatggaccagagagggaacatgaacaccatcagaagagcaagagcctt
agacctggaccccaacttgcagaaggagacgctgtcatttttagttctcctcttgaaatt
cagatcagtaaaatgaaccccccaccaccttatcctggaacagggactggaacagcatca
gcagcagcagcagtaccttcagctgccacagtagctgccgccgctgctgccgctgccact
aatagtaatgcctctccctcctcagttgacctttgcctcaagaaaaatgaattttcacta
tatcctgcagcacctcagtaccagacaccactgggctatgaaagaatcacaacatttgat
agcagtggaaatgttgaagaggtctgccgccctagaactagaatgctttgtaatcagaat
gtgtatactctgggtccaggcagctctgcaactttgcgagtcaccacctctgatggcaaa
aaagtaaaggtgccttgtactagtgccactcttaataggctaacagtgccgcgttattcc
atccctagtggtgatcctcctccttacccagagtctgttaatacaattggaaggaacaca
aaccatcgtatagacagcagtcttattcatgcaactttacgtcgcaacaacagggagact
tctctaaagatgactcaattgatggatgcacagagaactcttccaacaaaatccaaactg
aatagcattgcagcagcagcagccgtcacctatcagcaaagaatacccgcagctttatat
acttgcagccagtgcagcaacggaagtaccagtggtggaaatgctggtgtcagtggtgtg
aacaacagcagtagtagtaatagtaatggcatctctggtgggccacttattagacaagat
ttacctccagcaaatgccacccagcatagtactgttattgttcactccaacagtacatca
cctttaacttcgcagtcatcatacaatctactcagccctccagacagctgtagagataga
actgaatatattaactctgcatttactgaagatgaatctgtaacccagcagtgtcagata
gaaaagtctatgcggcaccttgccatcagtgatgtcactctagctgtcaagaggccgcct
ccttaccaatgggatccttcagctactgaggaaatctgggtcccacaagaaaggccaaca
cttggagcaccacctagtgttcataaacctccacctcttattttgaacccatctcagcac
atagacatgtcccgcttaccttttgttctatctcctaaatcacccaccagtccaaattca
aattttcaagctggctaccagatcaccttaccctttccaccaggtgctggttattcagga
ggccagcttcaggcgttacaacctattccacaaccctgctctcctaaggaggtagtggca
cctgtcccattttctcagcaagaaactcccatggtgttacctccaggatacccacctaat
atctctaatcttgcatgctgccccctaccacccatgtaccctggaggcagtacatgtgct
ggactgcagctgcctcctattgctttacacccttggaacacctatggatcttgtccaccc
ataccaaattcaacaggaaccctgcagccaaagacccacctactagtggaaaagccagtc
ctctcacccccaccaccagcagaccttcaaaaccatattggtgccacagaagctgtggct
gaggcaggggaaaacttccaggaagttctgtctctaaatgaaagtcctattccccaacga
tctgacaagtttagtaagaaaagccgaaaacgcttggacagtcgggcagaagaagcaaat
gtgccagcaattacagagggtaaagtgaaaaaagaagctcgtgcacttggcgatttcaac
tctctaatatccagtcccaggcttgggagggagaaaaagaaaccgaagaatcagaaagaa
caattgaaatccaagaaactgagcaaaaccaatgaatttcaggacagctcagagagcgag
ccagaattatttatcagtggtgatgaacttatgaatcagagccaaagtggaaaaaaaggc
tggaagactaagagaaacctgcggacagccagtgaactcgatgaattcaaatgccgcaag
gcaagtgaaaaggaagatcgtagtttaggaagccagggctttgtctttgtaatggcaaac
aagcagcctctttggaatgaagcaacgcaggtctaccagctagattttggaggtagagtg
acacaagagtctgcaaaaaacttccagattgaacttgatggtagacaggtgatgcagttt
ggcaggattgatggcaatgcctatatactggactttcaataccctttctctgcagtccag
gcctttgctgtggctcttgcaaatgttacccagcgactcaaataa
DBGET
integrated database retrieval system