Polypterus senegalus (gray bichir): 120525507
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Entry
120525507 CDS
T08668
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120525507 (ascc3)
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120525507 (ascc3)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
120525507 (ascc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ASCC3_N
WHD_SNRNP200
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
120525507
NCBI-ProteinID:
XP_039603796
LinkDB
All DBs
Position
3:121350360..122033446
Genome browser
AA seq
2207 aa
AA seq
DB search
MAQPRLTGALRSFSNVSRKDDYILQPFDLKSKRLKRQEVFSKASLTWKKIVQFINEHLGK
KEQEVVTEELRAVLRAAKEMVGDEYGQEMIESAAVFLFKVFYDKDQVGHEETRAIKQMFG
PFPLSSVDAACSAINKVARFFEETQIETFLKVHSISHLKDQVPFGKNISFSFDMYSVDTF
LDMSLQMKDNEDTKGFSLDYEKYLNNQQEQQKAVFVNTVDLKSPQGIDGSFLSREVDRYL
LHGTLGSPNASDLCTTLFEMLTSNKSDDELQNELFELLGPEGFELIEKLLQNRFAIVEIA
LNTVPDVKLNNFHDAAKRGIADNTTKPIYGCQVKIQSEQEKQLFKQYRREEKKLAKKEKK
GDDSEFSGETSIHFDPKELRLQREQALLTARISPILSRQREYERIHYPHVYDSYAEAMKT
SAFIGGSKVLLPEGIQRENNKMYEEVRIPSNTPMPAGFEEKTVYVSELDEIGQLVFKGMK
RLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHVHHGVIKKDEFKIVY
VAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKS
VGDIALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESSQSMIRILGLSATLPNYL
DVATFLHVNPFIGLFYFDSRFRPVPLCQTFVGIKTTNKVQHLHDMDEVCYDKVFEQIRSG
HQVMVFVHARNSTVKTALSLIEMAKNRGEASFYMTEQGADYGRCEKQVQKSRNKQLREMF
PCGFGIHHAGMLRQDRNLVEHLFSRGFIKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKR
GALVDLGILDVMQIFGRAGRPQFDDYGEATIISSHDKLSHYLTLLTQQNPIESQFLDSLP
DNLNAEVALGTVTNVDEAVKWLSYTYLYVRMRVNPLAYGINHKIYQMDPSLENYRTELVK
ESGRKLDKARMIRFEERTGYFSSTDLGRTASHFYIKYNTMETFNELFAVHNTEADILCIV
SKAEEFEQVKVREEEMEELDHLLNNYCEHPAAGGVENGYGKINILLQTYIGRGEVDSFSL
ISDLMYVAQNAARIVRALFEIALRKRWPTMTYRLLNLCKVIDKRLWGWANPLRQFPVLPG
SVISKLEDRNLSIDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQFPAILMEASIQPITRTV
LRVRLTITSDFKWNDQVHGSVSEPWWIWVEDPANDHIYHSEYFLLQKKQVVTNESQFLVF
TIPIFEPMPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGN
REYEALYKFTHFNPVQTQIFHTLYHTDSNVLLGAPTGSGKTVAAEMAIFRVFSKYPSSKA
VYIAPLKALVRERIEDWKIRIEEKLGKRVVELTGDVTPDIKAIAQADLIVTTPEKWDGVS
RSWQNRSYVQKVAIIIIDEIHLLGEERGPVLEVIVSRTNFISSHTAKPVRVVGLSTALAN
AKDLADWLGIGQLGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPSFQAIRSHSPS
KPVLIFVSSRRQTRLTAIDLITFLATEDDPKQWLHMDETEMADIICTVRESNLKFTLAFG
IGLHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEFYDGKTRRY
VDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVFADHL
NAEIAAGTIASKQDAMDYITWTYFFRRLVMNPSYYSLEDVNHDTINKYLSNLVEKCLLDL
ECSYCIEIGEDNHAIEPLTYGRIASYYYLKHQSVRMFKERLKADCTLEDLLFILSDAEEY
SELPVRHNEDQMNSDLASLLPIEVNPHSFDSAHTKTHLLLQAHFSRTPLPCPDYATDTKT
VLDNAIRICQAMLDVAANEGWLVTVLRICNLIQMIVQGRWLSDSSLLLLPNIEQQHLYLF
RKWNPEKRKNNSRGYQGPVECLPELIAACDGRENIFTSIVSTELVPALISQSWSFLCLLP
VIEVGMSIKGCWEDSQEQSEKILPLGVSDVRNEKNWLSVHADQEYVLQINLRRIIQGHQK
KKKDSKAVAPRFPKAKDEGWFIILGEVDKKELLALKRIGYIRNRSTALVAFFSPEKFGRY
IYTLYLMSDSYLGMDQQYDIYLNVIPSSTSAPVNSDISDALKNMALA
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacctcggcttactggagctctccgctccttttcaaatgtcagcaggaaagat
gattacattctgcagccctttgatttgaagtctaagagattgaaaagacaagaggtgttt
tctaaagctagcctaacatggaagaagattgttcaattcatcaatgaacacctgggcaag
aaagaacaggaagtggtaactgaagaattgagagcagtgctgcgggcagcaaaagaaatg
gttggtgatgagtatggacaagaaatgattgaaagtgcagctgttttcctatttaaagta
ttttatgataaagaccaagttggccatgaagaaacaagagctattaaacaaatgttcggg
ccttttccattatcctcagtagatgctgcctgcagtgccataaacaaggttgctagattc
tttgaggagactcaaatagaaacatttctcaaggttcacagcatcagccatttgaaagac
caagtgccttttggtaaaaatatctcattctcctttgatatgtactcagtagatactttc
ctggatatgtcattgcaaatgaaagataatgaagacacaaaaggattcagtttagattat
gaaaaatatttaaataatcagcaagagcaacaaaaagctgtgtttgtcaacactgtggac
cttaaatccccccaaggaattgacggctcttttctgagccgagaggttgacaggtatttg
ctgcatggaactttgggatctccgaatgcttctgacctttgtacaacactgtttgaaatg
ttaacgtcaaacaaaagtgatgatgaactccaaaatgagttgtttgagctactaggacct
gaaggttttgagctgattgagaaacttctgcagaataggttcgctattgtggaaattgcc
cttaacacagtgcctgatgtaaagctgaataattttcatgatgctgcaaaaagaggaata
gcagataacactacaaaacccatatatggctgtcaagttaaaatacagtctgaacaagaa
aagcagctgtttaaacagtatcgtcgtgaggagaaaaaacttgctaaaaaagaaaaaaag
ggtgacgattctgaattctctggtgaaacctcaattcactttgacccaaaagagttgagg
cttcagagagaacaagctttgctaacagctcgcatctctccaattttgagcagacagaga
gagtatgaaagaattcattaccctcatgtttatgattcctatgctgaagcgatgaaaaca
tcagcatttattggaggatcaaaggtacttttaccagaaggtattcaaagggaaaataac
aaaatgtatgaagaagtaaggattccttcaaatacacctatgccagctgggtttgaggaa
aaaacagtttacgtctctgaactggatgagataggacagctagttttcaaaggaatgaag
cggctaaaccgtatacagtctatagtgtttgagactgcttacaacaccaatgaaaacatg
ttaatttgtgcacccactggagctggaaaaactaatattgcaatgctaactgttcttcat
gaaatacggcagcatgttcatcacggagttataaaaaaggatgaatttaagattgtgtat
gttgctccaatgaaggccttggctgctgaaatgacaaattacttcagcaaacgtctggag
ccactaggcattgctgtgaaggagttaacaggtgacatgcaactgacaaaaggtgaaata
ctccggactcagatgttggtaacaacacctgagaaatgggatgtggtcaccagaaaaagt
gttggtgatattgctctttcccaaattgtccggcttcttatattagatgaggtccattta
cttcatgaagacagagggccagtgctggaaagtttagttgcaagaacacttcgtcaggtg
gagtcttcccaaagtatgataagaatattaggactttctgcaacacttcctaactacctt
gatgttgctacatttctccatgttaacccttttattggtctcttctactttgatagtaga
tttagaccagttccactttgccagacctttgtaggaattaaaacaacaaacaaggttcag
catctgcatgacatggatgaagtatgttatgataaagtgtttgagcaaataagatctggg
catcaggtcatggtatttgtacatgctagaaattccacagtgaagactgctttgtctctt
attgaaatggcaaaaaatcgtggagaagcatccttctacatgacagagcaaggggcagat
tatggacgatgtgaaaaacaggtgcagaaatctcgtaacaaacagttacgtgaaatgttt
ccatgtggctttggtattcatcatgctggaatgctacgacaagaccggaacctagtggag
caccttttttctcgtggattcattaaagtcttggtctgcacagctactctggcctgggga
gtcaaccttcctgcacatgcagtaataataaaaggcacccaaatatatgatgcaaagcga
ggagcattggtagatctgggaattcttgatgttatgcaaatatttggacgtgcaggtcga
ccacaatttgatgattatggcgaagccacgattatttcatctcatgataagctgagccat
tatcttactctacttactcaacaaaatcccatagagagtcagtttctggatagcctgcct
gacaatttgaacgcggaggttgcattgggaacggtaacaaatgtggatgaagcagtaaaa
tggcttagctacacatacctctatgtgcgaatgagagttaatcctctagcctatggcatt
aatcacaaaatatatcagatggacccaagtttggaaaattaccgtacagaacttgtaaag
gagtcaggccgaaagcttgataaagctagaatgattcgatttgaagagaggacaggatat
ttttcatcaacagatctgggtagaactgctagtcacttctacattaaatataacacaatg
gagacatttaatgaactttttgctgtacacaatactgaagctgacatcctttgcattgtg
tccaaagcagaagagtttgagcaggtcaaggtgagggaagaagaaatggaagagctggac
catttgcttaacaattattgtgagcaccctgctgctggtggtgtggaaaatgggtatgga
aaaataaacattcttctccagacatatatcggacgtggggaggttgacagcttctctctt
atttcagacctcatgtatgttgctcagaatgctgctcgaattgttcgagcccttttcgag
attgctcttcgaaaacgatggcctacaatgacatatcgcctgcttaacctttgtaaggtt
atagacaaacgattatggggatgggcgaatccactacggcaatttccagtactgccaggt
tctgtgatctctaaattggaagaccgcaaccttagcatcgataaattaaaggatatgaga
aaagatgaaataggtcacatgctgcatcatgtgaacattgggttgaaggtcaagcagtgt
gtccatcaattccctgcaatacttatggaagccagcatccagcctatcacacgcactgtt
cttagagtcaggctcacaattacctcggatttcaagtggaatgatcaggtccacggatca
gttagtgaaccttggtggatatgggttgaagatccagctaatgatcacatttatcattct
gaatattttctacttcaaaaaaaacaggttgtcaccaatgaatctcagtttttggtattt
accattccaatctttgagcctatgccttcacaatactatattcgggcagtgtcagacaga
tggcttggagccgaagcagtttgtatcattaattttcaacatctcatactgccagagaga
catccaccacacacagagctactagatcttcagcctttgcctgtcactgctttggggaac
agagaatatgaagctttgtacaaatttacccattttaacccagttcagactcagatattc
catactttgtatcacacggatagcaatgttcttcttggagcacctacaggctcggggaaa
acagttgctgctgaaatggcaatatttcgagtcttcagtaaatacccctcctccaaggca
gtgtatattgcacctttaaaagcactcgtcagagaaagaatagaggactggaaaataaga
atagaagaaaaattagggaaaagagttgttgagttaactggggatgtcactccagatata
aaagcaattgctcaggctgacctcattgtaaccacaccggagaaatgggatggagtcagc
agaagttggcaaaaccgaagttatgtgcagaaagttgcaattattatcattgatgagatc
catctactaggagaagaaagaggtcctgtactagaggttattgtgtcaagaactaatttc
atttcatctcacactgcaaaacctgtgagagttgtaggattatccacagctctggcaaat
gcaaaggatctagctgactggctaggcataggacagttgggactgttcaattttcgacct
tctgttcgtcctgttccactggaagtacacattcaaggatttccagggcagcactactgt
ccacgcatggccagcatgaacaagccatctttccaagctattcgaagccattcaccatcc
aaaccagtgttgatctttgtctcatcaagacgacagactcgtcttactgctattgacttg
attacttttctggccactgaagatgaccccaaacagtggcttcatatggatgaaacagag
atggctgatattatctgtacagtaagggaatctaatctcaaattcaccttggcctttgga
attggactgcatcatgctggcttgcatgagagagacaggaagacagtggaagagcttttt
gttaattgcaaaattcaggtattgattgccaccagcactctggcatggggagtgaatttt
ccagctcatcttgttattgttaaaggaactgaattttatgatgggaaaacacgacgttat
gttgactatcccattacagatgttttgcagatgatggggcgtgctggcaggccccagttt
gatgaccaaggaaaagctgtaattcttgttcatgacattaaaaaggatttttataaaaaa
tttctgtatgaacctttccctgttgaatcaagtttgctgggtgtgtttgcagaccattta
aatgctgaaattgctgctggaacaattgcatccaaacaagatgccatggattacataacg
tggacatacttcttccgtcgtcttgtaatgaaccccagttattacagtttggaagatgtg
aatcatgacaccatcaacaagtacctctccaatttagttgaaaagtgtcttctagacttg
gaatgttcatactgcatagaaataggagaggacaatcatgctattgaacctttaacatat
ggacgcattgcttcttattattacttgaaacatcagtcagtaaggatgtttaaagaaaga
ctgaaagccgattgtactctggaagatttgttgttcattctttcggatgctgaagagtat
tctgaactacctgtaaggcacaatgaagaccagatgaacagtgatctggcatctcttctt
cccatcgaagtaaatcctcattcatttgacagtgctcacaccaagactcacttgttgctt
caggcccatttcagccgaactccattgccttgtcctgactatgcaactgatacaaaaact
gtgcttgacaatgcaatcagaatatgccaggcaatgcttgatgttgcagcaaatgaaggg
tggttggtcacagtattgagaatctgtaacctcattcagatgattgttcagggacgatgg
ctaagtgattcatcactgctgttactaccaaacattgagcagcagcatctttaccttttc
agaaaatggaaccctgagaaaaggaaaaacaacagcagaggataccagggccctgttgaa
tgtcttcctgaacttatagctgcttgtgatggaagagaaaatatatttacttctattgtg
tctactgaattagtaccagcccttatctcacagtcttggtctttcctgtgtctgctgcca
gttattgaagttggcatgagcatcaaaggctgctgggaagatagtcaggaacaaagtgaa
aaaattcttcctcttggtgtatctgatgtcaggaatgagaaaaattggttgtctgtacac
gctgaccaagagtatgtactgcagataaatcttcgccgcatcattcaaggccatcagaag
aaaaaaaaggacagcaaagcagttgctcctcggttccctaaagcaaaggatgaaggatgg
ttcataatcctgggtgaagttgacaaaaaggagttactggctttaaaaagaataggctac
ataaggaatagaagcacagcattagtcgcattcttttcacctgaaaaatttggcaggtac
atctatacactttatctgatgagtgacagctaccttggcatggaccagcaatatgacatt
tatctaaatgttatacccagcagcacctctgccccagtcaacagtgacatctcagatgcc
ttaaagaatatggccctggcataa
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integrated database retrieval system
