Polypterus senegalus (gray bichir): 120525680
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Entry
120525680 CDS
T08668
Name
(RefSeq) pumilio homolog 2-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
psex
Polypterus senegalus (gray bichir)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF445
Rad26-like_N
Motif
Other DBs
NCBI-GeneID:
120525680
NCBI-ProteinID:
XP_039604116
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All DBs
Position
3:complement(165600370..165856022)
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AA seq
1213 aa
AA seq
DB search
MSLPCVILGMNEVIWQETRMMHANGSQDTSDVSMAGVPTGSVVGAGSGPGPSPGSGPSPG
TGVTSLSQALGGDSSLHLMPPTAMTNVPGMQPALSGRSQDDATVGYFFQRQAGEQLGGYS
NKHRWPTGDTIHVDQARSVDEMNHGFQALALESRGMGELLPTKKFWETDDSTKDGQKGIF
LADGWRDHAWGTSHHTVSQPIMVQRRPGQSFHANADVHSVLSPRSESGGLGVSMVEYVLS
SSPGDKLESRYRKGVFGAAVSEAEGVEKNEQKGKVSPFEEDKSRESKPSENDDLTKTNGM
VLPNGLDADCKDFNRLPGSRQGSPTEGTECLGPGQIHSDIMTSHTNSSGNKQSADEFQNT
EAQNVDTIEQAGIESLQFDYPGNQMQMDSSGAAMGLFDYNSQQQIFQRQNALTVQQLTAA
QQQQYALAAAAAQQQHIAGVFSAGLAPAAFVPNPYIIGTAPPGTDPYTAAGIAAAATLAG
PTVVPPQYYGVPWGVYPANLFQQQAAAAANNSSNQQATNQGQSQQQVLRTSGNQRSLTPN
QSQQNQQAESLAAANPTLAFSQGLATGIPGYQVLAPAAYYDQTGALVVGPGGRSGLSGPV
RLVASTPLIIGPAAAQAAAASATGAANTLGGATNGLFRPVSSQPQQQQQPPQPPPPNSNL
QSTSFYGSGSLSNNSHSSSLFSHGPGQPGSTSLGFGSSTSLGTTIGSALGNFGSTATNSA
SNSVSRRDSVSANSEMYKRPSSSLAPIGQPFFNSLGFSSSPSPIGMSLPNQNPGHSLTPP
PSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSNSQLFPPSRLRYS
RSDIMPSGRSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQM
VFSEILQAAYQLMTDVFGNYVIQKFFEFGSQDQKFALATRIRGHVLPLALQMYGCRVIQK
ALESISTDQQVISFLLQNEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAF
KAQVFVLSTHPYGCRVIQRILEHCTAEQTQPILDELHQHTEQLVQDQYGNYVIQHVLEHG
RSEDKSKIIGEIRGKVLALSQHKFASNVVEKCVTHSSRAERALLIDEVCCQNDGPHSALY
SMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKNST
DLGPIGGPANGLM
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgagccttccatgtgtcatattaggcatgaatgaagtgatctggcaggagacccgaatg
atgcatgcaaatggctctcaggatactagtgatgtcagcatggctggagttccaactggt
agtgttgttggtgcaggtagtgggcctggccccagccctgggtctggccctagccctgga
acaggtgttacatctctttcacaagcactaggtggagattcaagtttacatctcatgcct
ccaactgcaatgacaaatgtaccaggaatgcaaccagctcttagtggtcgctcccaggat
gatgcaactgtgggctacttcttccagaggcaggctggagagcaattaggtggttacagc
aacaaacatcgctggccaacgggagataccattcatgtagatcaggctcgctcagtggat
gagatgaaccatggcttccaagctcttgcactggagtcgagaggaatgggagagcttttg
ccaacaaaaaagttctgggaaacagatgactctactaaagatgggcagaaagggatattc
ttagcagatggatggcgagaccatgcatggggaacatcacatcacacagtatcccagccc
attatggttcaacgacggcctggacagagtttccatgctaatgccgatgttcactctgtt
ctgtctccacggtctgaaagtggaggtttgggagtcagcatggtggagtatgttctcagc
tcttccccaggtgacaagttggaaagtcgctacaggaagggagtttttggtgctgcagta
tctgaagcggaaggagttgagaaaaatgaacagaaagggaaggtatctccatttgaagag
gataaaagcagagaatcaaaaccaagtgaaaatgatgacctgacaaaaacaaatggaatg
gtgctcccaaatggactagatgcagactgcaaagattttaacaggttacctggaagtcga
cagggttctccaacagaaggaacagaatgcttgggtccgggtcagatacattctgacata
atgacttcacatacaaattcttctggcaacaagcaaagtgctgatgagtttcagaacacc
gaagcacaaaatgtggacaccattgaacaagctggcattgagtctttacagtttgattat
ccaggaaaccaaatgcaaatggattcatcaggggcagccatgggactcttcgactacaac
tcccagcaacagatttttcagaggcagaatgcattaactgttcaacagctgacagcagct
caacagcagcagtatgcccttgctgcagcagcagcccaacagcagcatatagcaggtgta
ttttcagcaggccttgctccagctgcttttgtgccaaatccatacataattggtacagcc
ccacctggaactgacccttatactgcagctgggattgcagcagcagctactttagcaggt
cctactgttgtcccccctcaatattatggtgtaccttggggtgtttatccagcaaatcta
ttccaacaacaagctgcagcagctgccaataactccagtaatcagcaggcaactaaccaa
ggacaaagtcagcaacaggttttgcgcaccagtggaaaccagagatccctaactcctaat
caaagtcagcaaaaccaacaagctgaatctttagcagctgcaaatccaacccttgccttc
agccaaggacttgccacagggattccaggatatcaggttttggcccctgcagcctattac
gatcaaactggtgctttagttgttggtcctggaggccgaagtggtctgagtggtcctgtt
agactagtggcttctacaccattaataattggccctgcagcagcacaagctgctgcagca
tcagcaactggagcagcaaacactttaggaggagccaccaatggtctcttccggcctgta
agctctcagcctcagcagcagcagcagccaccacagccacctccacctaacagcaatcta
caatctacttctttctatggtagtggctctctatctaataactcacacagtagctcatta
ttctcccatggccctggacagccaggaagtacttctcttggttttggaagtagtacttct
cttggaacgacaattggttctgctttaggaaattttgggtcaacagctacaaattctgca
agcaacagtgtctctcgcagggattcagtgtctgccaattctgaaatgtacaagagacct
agtagcagtttagctccaattggacaaccatttttcaacagtttgggcttctcctcctcc
ccaagtccaatcggcatgtctcttcccaatcaaaatccaggacactcattaactccacca
ccatctctttcatctcatggatcttcttcaagcttgcatcttggaggtctgacaaatgga
agtggtcgctatatctctgctgcacctggagctgaagcaaaataccgtagtgcaagcagt
acttccagcttatttagctccaatagtcagctgtttcctccctccagactccgctacagt
aggtcagacatcatgccttctggacgtagcagactcttggaggatttcagaaataatcgt
tttcccaaccttcagctcagagatcttattggtcatatagtggagttttctcaagaccag
catggatcaagatttattcagcaaaagttggagcgagccaccccagcagaaaggcaaatg
gtgttcagtgaaattttgcaagctgcctatcagttgatgactgatgtttttggaaattat
gtaatacaaaagttttttgagtttggtagccaagatcagaagttcgctttagctacaagg
atcagaggccatgttttacccctcgcccttcaaatgtatggctgtcgcgttattcagaaa
gccctggagtcaatttcaacagaccagcaggtaatttctttccttctccagaatgaaatg
gttaaggaacttgatggacatgtcttgaagtgtgttaaagaccaaaatggaaatcatgtt
gttcaaaagtgtattgaatgtgtccagcctcaggctctgcagttcattattgatgctttc
aaggctcaggtttttgtgctttcaacccacccatatggatgtcgtgtgattcagcgtata
ttagaacattgtacagctgagcaaacacagccaattctagatgaacttcatcagcacact
gagcaactggtacaggatcagtatggaaattatgttattcaacatgttttggaacatggg
cgctctgaagacaaaagcaagataattggtgaaatcagagggaaagttttagccttgagt
cagcataaatttgccagcaatgtagtagagaaatgtgtcacccactcctctcgagcagaa
agggctttgctaattgatgaagtctgctgtcagaatgatggtcctcacagtgccttatat
tcaatgatgaaagaccagtatgctaactatgtagtgcaaaagatgattgatatggcagaa
ccagctcagcgcaaaatcatcatgcataagatacggccccacattgcaacactgagaaaa
tacacatatggaaagcacatcttggctaaactggagaagtattacatgaagaacagcaca
gatctggggccaataggaggaccagcaaatggtttgatgtag
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