Polypterus senegalus (gray bichir): 120525682
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Entry
120525682 CDS
T08668
Name
(RefSeq) rho-related GTP-binding protein RhoB-like
KO
K04513
Ras homolog gene family, member A
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04081
Hormone signaling
psex04144
Endocytosis
psex04150
mTOR signaling pathway
psex04270
Vascular smooth muscle contraction
psex04310
Wnt signaling pathway
psex04350
TGF-beta signaling pathway
psex04510
Focal adhesion
psex04520
Adherens junction
psex04530
Tight junction
psex04621
NOD-like receptor signaling pathway
psex04625
C-type lectin receptor signaling pathway
psex04810
Regulation of actin cytoskeleton
psex05100
Bacterial invasion of epithelial cells
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120525682
04350 TGF-beta signaling pathway
120525682
04150 mTOR signaling pathway
120525682
09133 Signaling molecules and interaction
04081 Hormone signaling
120525682
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120525682
09144 Cellular community - eukaryotes
04510 Focal adhesion
120525682
04520 Adherens junction
120525682
04530 Tight junction
120525682
09142 Cell motility
04810 Regulation of actin cytoskeleton
120525682
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120525682
04625 C-type lectin receptor signaling pathway
120525682
09153 Circulatory system
04270 Vascular smooth muscle contraction
120525682
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120525682
05100 Bacterial invasion of epithelial cells
120525682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120525682
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120525682
04031 GTP-binding proteins [BR:
psex04031
]
120525682
Membrane trafficking [BR:
psex04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120525682
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120525682
Exosomal proteins of other body fluids (saliva and urine)
120525682
Exosomal proteins of colorectal cancer cells
120525682
Exosomal proteins of bladder cancer cells
120525682
GTP-binding proteins [BR:
psex04031
]
Small (monomeric) G-proteins
Rho Family
RhoA/B/C [OT]
120525682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
SrfA
Motif
Other DBs
NCBI-GeneID:
120525682
NCBI-ProteinID:
XP_039604128
LinkDB
All DBs
Position
3:165875115..165922564
Genome browser
AA seq
324 aa
AA seq
DB search
MATIRKKLVVIGDGACGKTCLLIVFSKDEFPKVYVPTVFETYVANIEVDGKEVELALWDT
AGQEDYNRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEAKHFCPNVPFVLVANKKD
LRNDKDVCFELAKMKKEPIKIEEGRAMAAQIQAYDYLECSAKTKDGVREVFETATRAALQ
VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPI
ILVANKKDLRNDENVRNELARMKQEPVKTEDGRAMAVRIQAYDYLECSAKTKDGVREVFE
TATRAALQKRPRPSGSCVNCCKLL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggctacaattaggaaaaagttagtggttattggagatggtgcttgtggtaaaacctgc
ctgctcattgtcttcagcaaagatgagttcccaaaagtttacgtacccactgtatttgag
acatatgttgctaatattgaggtggatggcaaagaagtggaactagctttgtgggatact
gctggacaagaggactataaccgccttcgccccctctcttacccagacacagatgttatt
ctgatgtgcttttcagtagacagtccggactctttggagaatatccctgagaagtgggtt
ccagaggccaagcacttctgccccaatgtaccttttgtcttggtagccaacaaaaaagat
ttaaggaatgacaaagatgtctgcttcgagctggccaagatgaagaaggagcccataaaa
attgaggaaggccgagctatggcggcccaaatccaggcctatgattacctagagtgttca
gccaaaaccaaagatggagtgcgtgaggtctttgagacagccacacgagcagcgcttcaa
gtggaactagcgttgtgggatactgctgggcaggaagattatgaccgcctccgccccctc
tcttatccagacacagatgttatccttatgtgcttttctgtggacagcccggattcgctg
gagaatatcccagagaagtgggtacctgaagtcaagcatttctgccccaacgtgccaatt
atcttggtggctaacaaaaaggacttgcgcaacgatgaaaacgtccgtaatgagctggct
agaatgaagcaggaacccgtgaaaaccgaagacgggcgggcaatggccgtccgtatccag
gcgtacgactatctggagtgttcggccaaaaccaaagacggggtgcgtgaggtcttcgag
acggccacgcgagcagcattgcaaaagaggccccggccatcagggagctgtgtcaattgc
tgcaaactattatga
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